4.0:Information of module
Root -K
In comparison with Col-0 HS help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009611 response to wounding BP 5.055e-09
GO:0033554 cellular response to stress BP 7.694e-09
GO:0042538 hyperosmotic salinity response BP 2.838e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0090627 plant epidermal cell differentiation BP 6.621e-08
GO:0010054 trichoblast differentiation BP 7.725e-08
GO:0010053 root epidermal cell differentiation BP 1.259e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Root -K		 Log2 signal ratio
Col-0 HS
1 254743_at AT4G13420 ATHAK5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, HAK5, high affinity K+ transporter 5 0.722 -0.096
2 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 0.618 -0.010
3 249476_at AT5G38910 [RmlC-like cupins superfamily protein] 0.514 0.100
4 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.494 0.112
5 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.485 0.074
6 252515_at AT3G46230 ATHSP17.4, ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4, HSP17.4, heat shock protein 17.4 0.483 1.655
7 260978_at AT1G53540 [HSP20-like chaperones superfamily protein] 0.471 1.740
8 245713_at AT5G04370 NAMT1 0.453 -0.035
9 245531_at AT4G15100 scpl30, serine carboxypeptidase-like 30 0.448 -0.006
10 263213_at AT1G30560 AtG3Pp3, glycerol-3-phosphate permease 3, G3Pp3, glycerol-3-phosphate permease 3 0.436 -0.011
11 267572_at AT2G30660 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.435 0.063
12 251293_at AT3G61930 unknown 0.411 0.114
13 257690_at AT3G12830 SAUR72, SMALL AUXIN UPREGULATED 72 0.404 -0.518
14 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 0.379 1.515
15 265817_at AT2G18050 HIS1-3, histone H1-3 0.373 -0.027
16 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.370 0.010
17 253305_at AT4G33666 unknown 0.366 -0.072
18 258078_at AT3G25870 unknown 0.357 0.009
19 250296_at AT5G12020 HSP17.6II, 17.6 kDa class II heat shock protein 0.356 1.680
20 259982_at AT1G76410 ATL8 0.349 -0.196
21 255568_at AT4G01250 AtWRKY22, WRKY22 0.343 -0.172
22 247047_at AT5G66650 unknown 0.328 -0.368
23 258338_at AT3G16150 ASPGB1, asparaginase B1 0.320 -0.054
24 260121_at AT1G33910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.315 0.189
25 250730_at AT5G06490 [RING/U-box superfamily protein] 0.313 0.097
26 251916_at AT3G53960 [Major facilitator superfamily protein] 0.309 -0.164
27 245136_at AT2G45210 SAG201, senescence-associated gene 201, SAUR36, SMALL AUXIN UPREGULATED 36 0.305 -0.318
28 257163_at AT3G24310 ATMYB71, MYB DOMAIN PROTEIN 71, MYB305, myb domain protein 305 0.303 0.060
29 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 0.298 -0.023
30 245296_at AT4G16370 oligopeptide transporter 0.292 -0.199
31 249535_at AT5G38820 [Transmembrane amino acid transporter family protein] 0.275 0.081
32 262373_at AT1G73120 unknown 0.273 0.042
33 254347_at AT4G22070 ATWRKY31, WRKY31, WRKY DNA-binding protein 31 0.264 0.037
34 267573_at AT2G30670 [NAD(P)-binding Rossmann-fold superfamily protein] 0.264 -0.000
35 254562_at AT4G19230 CYP707A1, cytochrome P450, family 707, subfamily A, polypeptide 1 0.262 -0.084
36 262703_at AT1G16510 SAUR41, SMALL AUXIN UPREGULATED 41 0.257 -0.072
37 259008_at AT3G09390 ATMT-1, ARABIDOPSIS THALIANA METALLOTHIONEIN-1, ATMT-K, ARABIDOPSIS THALIANA METALLOTHIONEIN-K, MT2A, metallothionein 2A 0.257 0.036
38 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.256 -0.046
39 255742_at AT1G25560 AtTEM1, EDF1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, TEM1, TEMPRANILLO 1 0.250 -0.071
40 261211_at AT1G12780 ATUGE1, A. THALIANA UDP-GLC 4-EPIMERASE 1, UGE1, UDP-D-glucose/UDP-D-galactose 4-epimerase 1 0.244 0.056
41 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.239 0.148
42 265151_at AT1G51340 [MATE efflux family protein] 0.238 0.220
43 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.235 0.556
44 265414_at AT2G16660 [Major facilitator superfamily protein] 0.230 0.062
45 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.229 -0.007
46 264758_at AT1G61340 AtFBS1, FBS1, F-box stress induced 1 0.227 0.972
47 251987_at AT3G53280 CYP71B5, cytochrome p450 71b5 0.226 -0.060
48 261420_at AT1G07720 KCS3, 3-ketoacyl-CoA synthase 3 0.225 -0.362
49 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.221 0.121
50 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.221 -0.325
51 264301_at AT1G78780 [pathogenesis-related family protein] 0.221 -0.009
52 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 0.220 1.152
53 254559_at AT4G19200 [proline-rich family protein] 0.219 0.023
54 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.219 0.119
55 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.217 0.087
56 264777_at AT1G08630 THA1, threonine aldolase 1 0.216 0.117
57 251342_at AT3G60690 SAUR59, SMALL AUXIN UPREGULATED RNA 59 0.215 -0.220
58 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.214 0.059
59 267069_at AT2G41010 ATCAMBP25, calmodulin (CAM)-binding protein of 25 kDa, CAMBP25, calmodulin (CAM)-binding protein of 25 kDa 0.213 -0.094
60 255700_at AT4G00200 AHL7, AT-hook motif nuclear localized protein 7 0.212 -0.064
61 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.212 0.038
62 245953_at AT5G28520 [Mannose-binding lectin superfamily protein] 0.210 0.135
63 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.210 0.093
64 250098_at AT5G17350 unknown 0.207 0.044
65 266695_at AT2G19810 AtOZF1, AtTZF2, OZF1, Oxidation-related Zinc Finger 1, TZF2, tandem zinc finger 2 0.206 -0.142
66 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.205 0.285
67 252214_at AT3G50260 ATERF#011, CEJ1, cooperatively regulated by ethylene and jasmonate 1, DEAR1, DREB AND EAR MOTIF PROTEIN 1 0.205 0.126
68 260243_at AT1G63720 unknown 0.203 -0.087
69 265460_at AT2G46600 [Calcium-binding EF-hand family protein] 0.203 0.047
70 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.203 0.633
71 252334_at AT3G48850 MPT2, mitochondrial phosphate transporter 2, PHT3;2, phosphate transporter 3;2 0.200 -0.010
72 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.198 0.018
73 253510_at AT4G31730 GDU1, glutamine dumper 1 0.197 -0.245
74 259442_at AT1G02310 MAN1, endo-beta-mannanase 1 0.193 0.074
75 263228_at AT1G30700 [FAD-binding Berberine family protein] 0.192 -0.074
76 250248_at AT5G13740 ZIF1, zinc induced facilitator 1 0.192 -0.050
77 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.192 0.069
78 252427_at AT3G47640 PYE, POPEYE 0.191 0.026
79 247450_at AT5G62350 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.188 -0.057
80 266561_at AT2G23960 [Class I glutamine amidotransferase-like superfamily protein] 0.188 0.087
81 261748_at AT1G76070 unknown 0.187 0.055
82 249306_at AT5G41400 [RING/U-box superfamily protein] 0.185 -0.288
83 251104_at AT5G01720 [RNI-like superfamily protein] 0.184 0.036
84 246145_at AT5G19880 [Peroxidase superfamily protein] 0.181 0.154
85 248392_at AT5G52050 [MATE efflux family protein] 0.181 0.063
86 262871_at AT1G65010 [INVOLVED IN: flower development] -0.477 -0.424
87 267439_at AT2G19060 [SGNH hydrolase-type esterase superfamily protein] -0.431 -0.033
88 264144_at AT1G79320 AtMC6, metacaspase 6, AtMCP2c, metacaspase 2c, MC6, metacaspase 6, MCP2c, metacaspase 2c -0.431 0.094
89 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] -0.430 -0.164
90 246652_at AT5G35190 EXT13, extensin 13 -0.399 -0.147
91 262664_at AT1G13970 unknown -0.393 -0.022
92 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.376 0.101
93 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 -0.375 0.041
94 250801_at AT5G04960 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.366 -0.237
95 259274_at AT3G01220 ATHB20, homeobox protein 20, HB20, homeobox protein 20 -0.353 0.206
96 254912_at AT4G11230 [Riboflavin synthase-like superfamily protein] -0.352 0.018
97 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 -0.337 -0.094
98 257143_at AT3G20110 CYP705A20, cytochrome P450, family 705, subfamily A, polypeptide 20 -0.332 0.045
99 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 -0.330 0.074
100 257113_at AT3G20130 CYP705A22, cytochrome P450, family 705, subfamily A, polypeptide 22, GPS1, gravity persistence signal 1 -0.320 -0.126
101 257761_at AT3G23090 WDL3 -0.302 0.094
102 260331_at AT1G80270 PPR596, PENTATRICOPEPTIDE REPEAT 596 -0.293 -0.063
103 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.290 -0.055
104 249203_at AT5G42590 CYP71A16, cytochrome P450, family 71, subfamily A, polypeptide 16, MRO, marneral oxidase -0.280 0.027
105 249755_at AT5G24580 [Heavy metal transport/detoxification superfamily protein ] -0.276 0.053
106 245348_at AT4G17770 ATTPS5, trehalose phosphatase/synthase 5, TPS5, TREHALOSE -6-PHOSPHATASE SYNTHASE S5, TPS5, trehalose phosphatase/synthase 5 -0.275 -0.003
107 247425_at AT5G62550 unknown -0.271 0.183
108 258134_at AT3G24530 [AAA-type ATPase family protein / ankyrin repeat family protein] -0.265 -0.025
109 258736_at AT3G05900 [neurofilament protein-related] -0.259 0.002
110 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 -0.257 -0.198
111 267465_at AT2G19170 SLP3, subtilisin-like serine protease 3 -0.256 -0.061
112 260366_at AT1G70460 AtPERK13, proline-rich extensin-like receptor kinase 13, PERK13, proline-rich extensin-like receptor kinase 13, RHS10, root hair specific 10 -0.253 -0.045
113 260883_at AT1G29270 unknown -0.244 -0.071
114 246826_at AT5G26310 UGT72E3 -0.242 0.038
115 261117_at AT1G75310 AUL1, auxilin-like 1 -0.238 -0.108
116 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 -0.232 0.056
117 252833_at AT4G40090 AGP3, arabinogalactan protein 3 -0.228 -0.236
118 265326_at AT2G18220 [Noc2p family] -0.224 -0.020
119 246995_at AT5G67470 ATFH6, ARABIDOPSIS FORMIN HOMOLOG 6, FH6, formin homolog 6 -0.220 -0.308
120 251368_at AT3G61380 TRM14, TON1 Recruiting Motif 14 -0.209 -0.197
121 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] -0.208 -0.180
122 267606_at AT2G26640 KCS11, 3-ketoacyl-CoA synthase 11 -0.204 -0.026
123 246872_at AT5G26080 [proline-rich family protein] -0.204 -0.135
124 255675_at AT4G00480 ATMYC1, myc1 -0.203 -0.111
125 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.203 0.037
126 247597_at AT5G60860 AtRABA1f, RAB GTPase homolog A1F, RABA1f, RAB GTPase homolog A1F -0.200 0.036
127 258966_at AT3G10690 GYRA, DNA GYRASE A -0.199 0.084
128 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.196 -0.096
129 249797_at AT5G23750 [Remorin family protein] -0.194 0.022
130 259995_at AT1G67930 [Golgi transport complex protein-related] -0.194 0.023
131 245387_at AT4G17520 [Hyaluronan / mRNA binding family] -0.190 -0.166
132 263575_at AT2G17070 unknown -0.190 -0.019
133 257608_at AT3G13860 HSP60-3A, heat shock protein 60-3A -0.188 0.193
134 251219_at AT3G62390 TBL6, TRICHOME BIREFRINGENCE-LIKE 6 -0.188 -0.053
135 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] -0.187 0.161
136 256516_at AT1G66150 TMK1, transmembrane kinase 1 -0.186 -0.211
137 255039_at AT4G09570 ATCPK4, CPK4, calcium-dependent protein kinase 4 -0.184 0.116
138 246282_at AT4G36580 [AAA-type ATPase family protein] -0.183 0.121
139 249354_at AT5G40480 EMB3012, embryo defective 3012 -0.179 -0.058
140 260423_at AT1G72470 ATEXO70D1, exocyst subunit exo70 family protein D1, EXO70D1, exocyst subunit exo70 family protein D1 -0.179 0.153
141 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 -0.179 0.059
142 251723_at AT3G56230 [BTB/POZ domain-containing protein] -0.178 0.112
143 261043_at AT1G01220 AtFKGP, Arabidopsis thaliana L-fucokinase/GDP-L-fucose pyrophosphorylase, FKGP, L-fucokinase/GDP-L-fucose pyrophosphorylase -0.178 -0.178
144 258750_at AT3G05910 [Pectinacetylesterase family protein] -0.178 -0.080
145 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 -0.176 -0.058
146 263386_at AT2G40150 TBL28, TRICHOME BIREFRINGENCE-LIKE 28 -0.176 -0.194
147 264471_at AT1G67120 AtMDN1, MDN1, MIDASIN 1 -0.174 0.076
148 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.172 -0.001
149 249167_at AT5G42860 unknown -0.171 -0.257
150 254633_at AT4G18640 MRH1, morphogenesis of root hair 1 -0.171 -0.099
151 263192_at AT1G36160 ACC1, acetyl-CoA carboxylase 1, AT-ACC1, EMB22, EMBRYO DEFECTIVE 22, GK, GURKE, GSD1, GLOSSYHEAD 1, PAS3, PASTICCINO 3, SFR3, SENSITIVE TO FREEZING 3 -0.171 -0.142
152 245584_at AT4G14940 AO1, amine oxidase 1, ATAO1, amine oxidase 1 -0.171 -0.298
153 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -0.171 -0.100
154 250930_at AT5G03160 ATP58IPK, homolog of mamallian P58IPK, P58IPK, homolog of mamallian P58IPK -0.169 0.316
155 262336_at AT1G64220 TOM7-2, translocase of outer membrane 7 kDa subunit 2 -0.169 0.036
156 247316_at AT5G64030 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.169 -0.147
157 263766_at AT2G21440 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.169 -0.004
158 259699_at AT1G68940 [Armadillo/beta-catenin-like repeat family protein] -0.167 0.008
159 249146_at AT5G43310 [COP1-interacting protein-related] -0.166 -0.052
160 257660_at AT3G13360 WIP3, WPP domain interacting protein 3 -0.165 0.012
161 260166_at AT1G79840 GL2, GLABRA 2 -0.165 -0.015
162 248085_at AT5G55480 GDPDL4, Glycerophosphodiester phosphodiesterase (GDPD) like 4, GPDL1, glycerophosphodiesterase-like 1, SVL1, SHV3-like 1 -0.164 -0.313
163 259026_at AT3G09240 BSK9, brassinosteroid-signaling kinase 9 -0.164 0.045
164 247427_at AT5G62580 [ARM repeat superfamily protein] -0.162 -0.044
165 252147_at AT3G51270 [protein serine/threonine kinases] -0.162 -0.009
166 263134_at AT1G78570 ATRHM1, ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 1, RHM1, rhamnose biosynthesis 1, ROL1, REPRESSOR OF LRX1 1 -0.160 -0.153
167 254218_at AT4G23740 [Leucine-rich repeat protein kinase family protein] -0.160 -0.112
168 256283_at AT3G12540 unknown -0.158 -0.050
169 255224_at AT4G05400 [copper ion binding] -0.156 0.081