4.0:Information of module
Shoot -Cs
In comparison with seedlings protease IV help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 1.761e-14
GO:0050896 response to stimulus BP 4.234e-12
GO:0010033 response to organic substance BP 7.418e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.986e-07
GO:0019684 photosynthesis, light reaction BP 1.040e-06
GO:0009657 plastid organization BP 1.264e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Shoot -Cs		 Log2 signal ratio
seedlings protease IV
1 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A 0.761 -0.095
2 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.704 0.033
3 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.674 0.497
4 251975_at AT3G53230 AtCDC48B, cell division cycle 48B 0.538 -0.048
5 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.516 1.299
6 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.501 0.783
7 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.429 0.337
8 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.391 0.180
9 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 0.389 0.188
10 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.376 0.531
11 265499_at AT2G15480 UGT73B5, UDP-glucosyl transferase 73B5 0.345 0.828
12 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.342 -0.077
13 263515_at AT2G21640 unknown 0.327 -0.004
14 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 0.326 0.111
15 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.311 0.893
16 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.306 0.209
17 252334_at AT3G48850 MPT2, mitochondrial phosphate transporter 2, PHT3;2, phosphate transporter 3;2 0.300 0.190
18 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 0.296 0.210
19 251895_at AT3G54420 ATCHITIV, CHITINASE CLASS IV, ATEP3, homolog of carrot EP3-3 chitinase, CHIV, EP3, homolog of carrot EP3-3 chitinase 0.293 0.853
20 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.292 0.749
21 256989_at AT3G28580 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.291 0.869
22 261242_at AT1G32960 ATSBT3.3, SBT3.3 0.289 0.363
23 249252_at AT5G42010 [Transducin/WD40 repeat-like superfamily protein] 0.281 0.500
24 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.281 0.502
25 264866_at AT1G24140 [Matrixin family protein] 0.279 1.043
26 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.275 0.019
27 249515_at AT5G38530 TSBtype2, tryptophan synthase beta type 2 0.254 -0.067
28 256883_at AT3G26440 unknown 0.247 -0.029
29 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.244 -0.111
30 266536_at AT2G16900 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.217 0.244
31 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 0.211 0.665
32 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.205 -0.057
33 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.204 -0.101
34 262548_at AT1G31280 AGO2, argonaute 2, AtAGO2 0.192 -0.022
35 253224_at AT4G34860 A/N-InvB, alkaline/neutral invertase B 0.190 -0.023
36 250738_at AT5G05730 AMT1, A-METHYL TRYPTOPHAN RESISTANT 1, ASA1, anthranilate synthase alpha subunit 1, JDL1, JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1, TRP5, TRYPTOPHAN BIOSYNTHESIS 5, WEI2, WEAK ETHYLENE INSENSITIVE 2 0.187 0.255
37 245089_at AT2G45290 TKL2, transketolase 2 0.187 0.059
38 246042_at AT5G19440 [NAD(P)-binding Rossmann-fold superfamily protein] 0.185 -0.032
39 264941_at AT1G60680 [NAD(P)-linked oxidoreductase superfamily protein] 0.185 -0.049
40 258979_at AT3G09440 [Heat shock protein 70 (Hsp 70) family protein] 0.172 0.023
41 249372_at AT5G40760 G6PD6, glucose-6-phosphate dehydrogenase 6 0.171 0.048
42 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.530 0.134
43 251575_at AT3G58120 ATBZIP61, BZIP61 -0.406 -0.114
44 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.397 0.075
45 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 -0.366 0.037
46 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.342 0.024
47 252765_at AT3G42800 unknown -0.329 -0.026
48 257858_at AT3G12920 BRG3, BOI-related gene 3 -0.306 0.016
49 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 -0.304 -0.546
50 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.300 -0.312
51 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.293 -0.129
52 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.293 -0.007
53 254787_at AT4G12690 unknown -0.292 -0.170
54 261597_at AT1G49780 PUB26, plant U-box 26 -0.289 0.018
55 246952_at AT5G04820 ATOFP13, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13, OFP13, ovate family protein 13 -0.272 -0.048
56 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN -0.237 -0.082
57 258528_at AT3G06770 [Pectin lyase-like superfamily protein] -0.232 -0.119
58 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] -0.223 -0.092
59 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.222 -0.046
60 257986_at AT3G20865 AGP40, arabinogalactan protein 40 -0.211 -0.047
61 256066_at AT1G06980 unknown -0.205 -0.083
62 251024_at AT5G02180 [Transmembrane amino acid transporter family protein] -0.196 -0.188
63 247162_at AT5G65730 XTH6, xyloglucan endotransglucosylase/hydrolase 6 -0.194 -0.189
64 245176_at AT2G47440 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.191 -0.139
65 249355_at AT5G40500 unknown -0.190 -0.185
66 263305_at AT2G01930 ATBPC1, BASIC PENTACYSTEINE1, BBR, BPC1, basic pentacysteine1 -0.177 0.072
67 257571_at AT3G16870 GATA17, GATA transcription factor 17 -0.176 -0.167
68 254667_at AT4G18280 [glycine-rich cell wall protein-related] -0.175 -0.033
69 264096_at AT1G78995 unknown -0.170 -0.222
70 265042_at AT1G04040 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.167 -0.073
71 265265_at AT2G42900 [Plant basic secretory protein (BSP) family protein] -0.167 -0.021
72 251919_at AT3G53800 Fes1B, Fes1B -0.166 0.006
73 264014_at AT2G21210 SAUR6, SMALL AUXIN UPREGULATED RNA 6 -0.165 -0.428
74 258676_at AT3G08600 unknown -0.164 -0.132
75 250649_at AT5G06690 WCRKC1, WCRKC thioredoxin 1 -0.164 0.056
76 261742_at AT1G08390 unknown -0.163 -0.077
77 257811_at AT3G25280 AtNPF4.2, NPF4.2, NRT1/ PTR family 4.2 -0.163 0.016
78 253679_at AT4G29610 [Cytidine/deoxycytidylate deaminase family protein] -0.162 0.069
79 254303_at AT4G22830 unknown -0.162 -0.001
80 246011_at AT5G08330 AtTCP11, TCP11, TCP domain protein 11 -0.157 -0.081
81 255878_at AT2G40620 [Basic-leucine zipper (bZIP) transcription factor family protein] -0.157 0.010