4.0:Information of module
3.5h KNO3 Whole root
In comparison with root endodermis -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0007049 cell cycle BP 1.088e-06
GO:0044267 cellular protein metabolic process BP 3.302e-05
GO:0022402 cell cycle process BP 8.275e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006661 phosphatidylinositol biosynthetic proces... BP 3.889e-13
GO:0046488 phosphatidylinositol metabolic process BP 4.158e-13
GO:0046474 glycerophospholipid biosynthetic process BP 9.471e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
3.5h KNO3 Whole root		 Log2 signal ratio
root endodermis -S
1 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] 0.305 0.123
2 262864_at AT1G64920 [UDP-Glycosyltransferase superfamily protein] 0.288 0.711
3 256018_at AT1G58300 HO4, heme oxygenase 4 0.282 -0.047
4 261558_at AT1G01770 unknown 0.174 0.028
5 248569_at AT5G49770 [Leucine-rich repeat protein kinase family protein] 0.174 -0.006
6 246425_at AT5G17420 ATCESA7, CESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRX3, IRREGULAR XYLEM 3, MUR10, MURUS 10 0.163 -0.001
7 262454_at AT1G11190 BFN1, bifunctional nuclease i, ENDO1, ENDONUCLEASE 1 0.160 -0.243
8 250571_at AT5G08200 [peptidoglycan-binding LysM domain-containing protein] 0.154 0.063
9 263127_at AT1G78610 MSL6, mechanosensitive channel of small conductance-like 6 0.149 0.009
10 262628_at AT1G06490 ATGSL07, Arabidopsis thaliana glucan synthase-like 7, atgsl7, CalS7, callose synthase 7, gsl07, GSL07, glucan synthase-like 7, GSL7, glucan synthase-like 7 0.146 -0.136
11 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 0.141 0.103
12 245174_at AT2G47500 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] 0.135 -0.073
13 257237_at AT3G14890 [phosphoesterase] 0.132 0.236
14 267163_at AT2G37520 [Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain] 0.129 0.317
15 253432_at AT4G32450 MEF8S, MEF8 similar 0.127 0.171
16 262859_at AT1G64790 ILA, ILITYHIA 0.127 0.043
17 257593_at AT3G24840 [Sec14p-like phosphatidylinositol transfer family protein] 0.127 0.309
18 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 0.126 -0.229
19 247147_at AT5G65630 GTE7, global transcription factor group E7 0.126 0.149
20 250691_at AT5G06580 [FAD-linked oxidases family protein] 0.125 -0.094
21 250739_at AT5G05740 ATEGY2, EGY2, ethylene-dependent gravitropism-deficient and yellow-green-like 2 0.121 -0.010
22 245089_at AT2G45290 TKL2, transketolase 2 0.118 -0.072
23 254299_at AT4G22920 ATNYE1, NON-YELLOWING 1, NYE1, NON-YELLOWING 1, SGR, STAY-GREEN 0.118 -0.292
24 256480_at AT1G33410 ATNUP160, ARABIDOPSIS NUCLEOPORIN 160, NUP160, NUCLEOPORIN 160, SAR1, SUPPRESSOR OF AUXIN RESISTANCE1 0.116 -0.022
25 248740_at AT5G48130 [Phototropic-responsive NPH3 family protein] 0.116 -0.030
26 248749_at AT5G47880 ERF1-1, eukaryotic release factor 1-1 0.116 0.136
27 265155_at AT1G30990 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.111 -0.053
28 263163_at AT1G03160 FZL, FZO-like 0.109 -0.100
29 266092_at AT2G37880 unknown 0.109 -0.029
30 252862_at AT4G39830 [Cupredoxin superfamily protein] 0.108 -0.238
31 249965_at AT5G19020 MEF18, mitochondrial editing factor 18 0.107 0.395
32 245657_at AT1G56720 [Protein kinase superfamily protein] 0.107 0.216
33 252468_at AT3G46970 ATPHS2, Arabidopsis thaliana alpha-glucan phosphorylase 2, PHS2, alpha-glucan phosphorylase 2 0.106 0.189
34 251419_at AT3G60470 unknown 0.105 -0.068
35 254155_at AT4G24480 [Protein kinase superfamily protein] 0.104 0.129
36 252463_at AT3G47070 [LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope] -0.354 -0.083
37 265817_at AT2G18050 HIS1-3, histone H1-3 -0.273 0.033
38 255248_at AT4G05180 PSBQ, PHOTOSYSTEM II SUBUNIT Q, PSBQ-2, photosystem II subunit Q-2, PSII-Q -0.266 -0.700
39 252661_at AT3G44450 unknown -0.246 -0.282
40 261572_at AT1G01170 unknown -0.240 -0.355
41 262634_at AT1G06690 [NAD(P)-linked oxidoreductase superfamily protein] -0.232 -0.200
42 247339_at AT5G63690 [Nucleic acid-binding, OB-fold-like protein] -0.220 -0.153
43 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.218 -0.090
44 251194_at AT3G62920 unknown -0.217 -0.370
45 250233_at AT5G13460 IQD11, IQ-domain 11 -0.210 -0.033
46 251031_at AT5G02120 OHP, one helix protein, PDE335, PIGMENT DEFECTIVE 335 -0.209 -0.598
47 256870_at AT3G26300 CYP71B34, cytochrome P450, family 71, subfamily B, polypeptide 34 -0.207 0.012
48 251676_at AT3G57320 unknown -0.202 -0.406
49 247072_at AT5G66490 unknown -0.199 -0.385
50 264134_at AT1G79070 [SNARE-associated protein-related] -0.189 -0.105
51 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.187 -0.292
52 247409_at AT5G62980 FOLB2 -0.186 -0.339
53 245064_at AT2G39725 [LYR family of Fe/S cluster biogenesis protein] -0.182 -0.336
54 248151_at AT5G54270 LHCB3, light-harvesting chlorophyll B-binding protein 3, LHCB3*1 -0.182 -0.279
55 245370_at AT4G16840 unknown -0.180 -0.101
56 249966_at AT5G19030 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.175 -0.358
57 245747_at AT1G51100 CRR41, CHLORORESPIRATORY REDUCTION 41 -0.173 -0.016
58 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 -0.170 -0.124
59 254362_at AT4G22160 unknown -0.169 -0.246
60 255865_at AT2G30330 BLOS1, BLOC subunit 1 -0.169 -0.120
61 246001_at AT5G20790 unknown -0.169 -0.011
62 246913_at AT5G25830 GATA12, GATA transcription factor 12 -0.167 0.362
63 264636_at AT1G65490 unknown -0.166 -0.110
64 258333_at AT3G16000 MFP1, MAR binding filament-like protein 1 -0.162 -0.108
65 263124_at AT1G78480 [Prenyltransferase family protein] -0.161 -0.226
66 263661_at AT1G04290 [Thioesterase superfamily protein] -0.160 -0.136
67 253726_at AT4G29430 rps15ae, ribosomal protein S15A E -0.160 0.109
68 259171_at AT3G03590 [SWIB/MDM2 domain superfamily protein] -0.156 -0.146
69 262719_at AT1G43590 unknown -0.156 -0.050