4.0:Information of module
whole roots 140 mM NaCl 32 hour
In comparison with whole roots 140 mM NaCl 30 minutes help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009266 response to temperature stimulus BP 1.013e-08
GO:1901700 response to oxygen-containing compound BP 3.438e-08
GO:0009408 response to heat BP 7.968e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009987 cellular process BP 3.119e-10
GO:0044699 single-organism process BP 4.063e-09
GO:0044763 single-organism cellular process BP 2.057e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
whole roots 140 mM NaCl 32 hour		 Log2 signal ratio
whole roots 140 mM NaCl 30 minutes
1 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.238 0.429
2 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.233 0.791
3 256779_at AT3G13784 AtcwINV5, cell wall invertase 5, CWINV5, cell wall invertase 5 1.207 0.124
4 245689_at AT5G04120 [Phosphoglycerate mutase family protein] 0.937 0.079
5 250624_at AT5G07330 unknown 0.925 0.072
6 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 0.886 0.183
7 254823_at AT4G12580 unknown 0.842 0.107
8 246241_at AT4G37050 AtPLAIVC, phospholipase A IVC, PLA V, PLAIII{beta}, patatin-related phospholipase III beta, PLP4, PATATIN-like protein 4 0.727 0.020
9 266690_at AT2G19900 ATNADP-ME1, Arabidopsis thaliana NADP-malic enzyme 1, NADP-ME1, NADP-malic enzyme 1 0.719 0.083
10 254790_at AT4G12800 PSAL, photosystem I subunit l 0.664 0.001
11 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.653 0.130
12 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 0.598 0.402
13 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.580 0.088
14 267391_at AT2G44480 BGLU17, beta glucosidase 17 0.577 -0.061
15 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.551 0.226
16 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.551 0.504
17 251181_at AT3G62820 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.547 -0.003
18 261197_at AT1G12900 GAPA-2, glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.543 -0.056
19 257672_at AT3G20300 unknown 0.539 0.157
20 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.508 0.225
21 262113_at AT1G02820 AtLEA3, LEA3, late embryogenesis abundant 3 0.506 0.194
22 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.498 0.056
23 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.472 0.157
24 254667_at AT4G18280 [glycine-rich cell wall protein-related] 0.466 0.267
25 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.465 0.016
26 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 0.459 -0.066
27 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.458 0.180
28 263881_at AT2G21820 unknown 0.444 0.075
29 246617_at AT5G36270 [similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1)] 0.440 -0.035
30 245349_at AT4G16690 ATMES16, ARABIDOPSIS THALIANA METHYL ESTERASE 16, MES16, methyl esterase 16 0.414 -0.041
31 245044_at AT2G26500 [cytochrome b6f complex subunit (petM), putative] 0.404 -0.053
32 260276_at AT1G80450 [VQ motif-containing protein] 0.401 0.186
33 250446_at AT5G10770 [Eukaryotic aspartyl protease family protein] 0.397 -0.002
34 252888_at AT4G39210 APL3 0.394 -0.098
35 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 0.387 0.328
36 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.387 0.042
37 267036_at AT2G38465 unknown 0.377 0.112
38 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.373 0.150
39 256114_at AT1G16850 unknown 0.372 0.111
40 250859_at AT5G04660 CYP77A4, cytochrome P450, family 77, subfamily A, polypeptide 4 0.365 0.056
41 260561_at AT2G43580 [Chitinase family protein] 0.359 0.001
42 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.357 0.266
43 263709_at AT1G09310 unknown 0.353 0.220
44 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.351 0.003
45 248392_at AT5G52050 [MATE efflux family protein] 0.350 0.535
46 256514_at AT1G66130 [NAD(P)-binding Rossmann-fold superfamily protein] 0.348 0.035
47 248467_at AT5G50800 AtSWEET13, SWEET13 0.347 0.124
48 247061_at AT5G66780 unknown 0.347 0.165
49 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] 0.342 0.217
50 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 0.341 0.094
51 253494_at AT4G31830 unknown 0.336 0.114
52 258695_at AT3G09640 APX1B, ASCORBATE PEROXIDASE 1B, APX2, ascorbate peroxidase 2 0.333 0.016
53 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 -0.848 -0.153
54 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] -0.722 -0.119
55 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.716 -0.396
56 254687_at AT4G13770 CYP83A1, cytochrome P450, family 83, subfamily A, polypeptide 1, REF2, REDUCED EPIDERMAL FLUORESCENCE 2 -0.635 -0.051
57 267137_at AT2G23410 ACPT, cis-prenyltransferase, AtcPT3, CPT, cis-prenyltransferase, cPT3, cis-prenyltransferase 3 -0.582 -0.284
58 253044_at AT4G37290 unknown -0.566 -0.312
59 245076_at AT2G23170 GH3.3 -0.553 0.058
60 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.547 -0.035
61 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.546 -0.133
62 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 -0.542 -0.033
63 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.498 -0.081
64 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.464 -0.027
65 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.455 -0.135
66 267085_at AT2G32620 ATCSLB02, cellulose synthase-like B, ATCSLB2, CELLULOSE SYNTHASE LIKE B2, CSLB02, CELLULOSE SYNTHASE LIKE B2, CSLB02, cellulose synthase-like B -0.452 -0.086
67 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.444 0.082
68 262162_at AT1G78020 unknown -0.428 -0.094
69 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.410 -0.249
70 254125_at AT4G24670 TAR2, tryptophan aminotransferase related 2 -0.395 -0.017
71 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 -0.379 -0.425
72 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 -0.372 -0.001
73 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.370 -0.294
74 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] -0.360 -0.185
75 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 -0.353 0.021
76 263515_at AT2G21640 unknown -0.342 0.100
77 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.326 -0.104
78 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.311 -0.042
79 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.290 -0.045
80 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.274 0.084
81 251293_at AT3G61930 unknown -0.263 0.032
82 253305_at AT4G33666 unknown -0.250 0.075
83 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 -0.249 0.044
84 245017_at ATCG00510 PSAI, photsystem I subunit I -0.248 -0.111
85 267483_at AT2G02810 ATUTR1, UDP-GALACTOSE TRANSPORTER 1, UTR1, UDP-galactose transporter 1 -0.247 -0.019
86 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.233 -0.011
87 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.232 0.076
88 262373_at AT1G73120 unknown -0.231 0.052
89 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.230 -0.393
90 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.230 -0.085
91 260745_at AT1G78370 ATGSTU20, glutathione S-transferase TAU 20, GSTU20, glutathione S-transferase TAU 20 -0.222 0.116
92 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.222 -0.043
93 253729_at AT4G29360 [O-Glycosyl hydrolases family 17 protein] -0.221 -0.093
94 267389_at AT2G44460 BGLU28, beta glucosidase 28 -0.217 0.260
95 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 -0.215 -0.098
96 264013_at AT2G21070 FIO1, FIONA1 -0.206 -0.192
97 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -0.205 -0.008
98 263683_at AT1G26870 ANAC009, Arabidopsis NAC domain containing protein 9, FEZ, FEZ -0.203 -0.126
99 258938_at AT3G10080 [RmlC-like cupins superfamily protein] -0.202 0.018
100 256359_at AT1G66460 [Protein kinase superfamily protein] -0.200 0.057
101 251182_at AT3G62600 ATERDJ3B, ERDJ3B -0.199 -0.045
102 245293_at AT4G16660 [heat shock protein 70 (Hsp 70) family protein] -0.196 -0.053
103 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.193 0.004
104 253227_at AT4G35030 [Protein kinase superfamily protein] -0.192 -0.244