4.0:Information of module
whole roots 140 mM NaCl 32 hour
In comparison with 3x(p) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009266 response to temperature stimulus BP 1.013e-08
GO:1901700 response to oxygen-containing compound BP 3.438e-08
GO:0009408 response to heat BP 7.968e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009987 cellular process BP 3.119e-10
GO:0044699 single-organism process BP 4.063e-09
GO:0044763 single-organism cellular process BP 2.057e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
whole roots 140 mM NaCl 32 hour		 Log2 signal ratio
3x(p)
1 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.238 0.099
2 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.233 0.379
3 256779_at AT3G13784 AtcwINV5, cell wall invertase 5, CWINV5, cell wall invertase 5 1.207 -0.046
4 245689_at AT5G04120 [Phosphoglycerate mutase family protein] 0.937 0.042
5 250624_at AT5G07330 unknown 0.925 0.122
6 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 0.886 0.028
7 254823_at AT4G12580 unknown 0.842 0.037
8 246241_at AT4G37050 AtPLAIVC, phospholipase A IVC, PLA V, PLAIII{beta}, patatin-related phospholipase III beta, PLP4, PATATIN-like protein 4 0.727 0.001
9 266690_at AT2G19900 ATNADP-ME1, Arabidopsis thaliana NADP-malic enzyme 1, NADP-ME1, NADP-malic enzyme 1 0.719 0.046
10 254790_at AT4G12800 PSAL, photosystem I subunit l 0.664 0.014
11 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.653 0.010
12 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 0.598 0.081
13 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.580 0.087
14 267391_at AT2G44480 BGLU17, beta glucosidase 17 0.577 0.031
15 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.551 0.339
16 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.551 0.062
17 251181_at AT3G62820 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.547 0.019
18 261197_at AT1G12900 GAPA-2, glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.543 0.001
19 257672_at AT3G20300 unknown 0.539 0.004
20 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.508 0.025
21 262113_at AT1G02820 AtLEA3, LEA3, late embryogenesis abundant 3 0.506 -0.180
22 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.498 0.057
23 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.472 0.155
24 254667_at AT4G18280 [glycine-rich cell wall protein-related] 0.466 0.044
25 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.465 0.032
26 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 0.459 0.008
27 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.458 -0.110
28 263881_at AT2G21820 unknown 0.444 0.217
29 246617_at AT5G36270 [similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1)] 0.440 0.064
30 245349_at AT4G16690 ATMES16, ARABIDOPSIS THALIANA METHYL ESTERASE 16, MES16, methyl esterase 16 0.414 0.031
31 245044_at AT2G26500 [cytochrome b6f complex subunit (petM), putative] 0.404 0.030
32 260276_at AT1G80450 [VQ motif-containing protein] 0.401 0.157
33 250446_at AT5G10770 [Eukaryotic aspartyl protease family protein] 0.397 -0.012
34 252888_at AT4G39210 APL3 0.394 -0.024
35 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 0.387 0.047
36 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.387 -0.064
37 267036_at AT2G38465 unknown 0.377 0.051
38 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.373 -0.043
39 256114_at AT1G16850 unknown 0.372 -0.045
40 250859_at AT5G04660 CYP77A4, cytochrome P450, family 77, subfamily A, polypeptide 4 0.365 0.009
41 260561_at AT2G43580 [Chitinase family protein] 0.359 -0.142
42 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.357 -0.012
43 263709_at AT1G09310 unknown 0.353 0.012
44 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.351 0.001
45 248392_at AT5G52050 [MATE efflux family protein] 0.350 0.061
46 256514_at AT1G66130 [NAD(P)-binding Rossmann-fold superfamily protein] 0.348 0.038
47 248467_at AT5G50800 AtSWEET13, SWEET13 0.347 -0.030
48 247061_at AT5G66780 unknown 0.347 0.033
49 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] 0.342 0.041
50 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 0.341 -0.053
51 253494_at AT4G31830 unknown 0.336 0.032
52 258695_at AT3G09640 APX1B, ASCORBATE PEROXIDASE 1B, APX2, ascorbate peroxidase 2 0.333 0.082
53 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 -0.848 0.000
54 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] -0.722 -0.454
55 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.716 -0.060
56 254687_at AT4G13770 CYP83A1, cytochrome P450, family 83, subfamily A, polypeptide 1, REF2, REDUCED EPIDERMAL FLUORESCENCE 2 -0.635 -0.037
57 267137_at AT2G23410 ACPT, cis-prenyltransferase, AtcPT3, CPT, cis-prenyltransferase, cPT3, cis-prenyltransferase 3 -0.582 0.013
58 253044_at AT4G37290 unknown -0.566 0.059
59 245076_at AT2G23170 GH3.3 -0.553 -0.076
60 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.547 0.024
61 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.546 -0.004
62 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 -0.542 0.077
63 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.498 -0.035
64 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.464 -0.072
65 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.455 -0.002
66 267085_at AT2G32620 ATCSLB02, cellulose synthase-like B, ATCSLB2, CELLULOSE SYNTHASE LIKE B2, CSLB02, CELLULOSE SYNTHASE LIKE B2, CSLB02, cellulose synthase-like B -0.452 -0.183
67 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.444 -0.115
68 262162_at AT1G78020 unknown -0.428 -0.011
69 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.410 0.319
70 254125_at AT4G24670 TAR2, tryptophan aminotransferase related 2 -0.395 -0.016
71 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 -0.379 -0.097
72 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 -0.372 -0.060
73 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.370 -0.060
74 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] -0.360 -0.005
75 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 -0.353 -0.304
76 263515_at AT2G21640 unknown -0.342 -0.056
77 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.326 0.043
78 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.311 -0.034
79 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.290 0.029
80 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.274 -0.057
81 251293_at AT3G61930 unknown -0.263 -0.224
82 253305_at AT4G33666 unknown -0.250 0.053
83 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 -0.249 0.037
84 245017_at ATCG00510 PSAI, photsystem I subunit I -0.248 0.076
85 267483_at AT2G02810 ATUTR1, UDP-GALACTOSE TRANSPORTER 1, UTR1, UDP-galactose transporter 1 -0.247 0.020
86 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.233 -0.026
87 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.232 -0.046
88 262373_at AT1G73120 unknown -0.231 -0.103
89 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.230 -0.056
90 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.230 -0.055
91 260745_at AT1G78370 ATGSTU20, glutathione S-transferase TAU 20, GSTU20, glutathione S-transferase TAU 20 -0.222 0.003
92 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.222 -0.026
93 253729_at AT4G29360 [O-Glycosyl hydrolases family 17 protein] -0.221 0.076
94 267389_at AT2G44460 BGLU28, beta glucosidase 28 -0.217 0.287
95 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 -0.215 -0.013
96 264013_at AT2G21070 FIO1, FIONA1 -0.206 -0.052
97 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -0.205 0.005
98 263683_at AT1G26870 ANAC009, Arabidopsis NAC domain containing protein 9, FEZ, FEZ -0.203 0.002
99 258938_at AT3G10080 [RmlC-like cupins superfamily protein] -0.202 0.021
100 256359_at AT1G66460 [Protein kinase superfamily protein] -0.200 0.069
101 251182_at AT3G62600 ATERDJ3B, ERDJ3B -0.199 -0.012
102 245293_at AT4G16660 [heat shock protein 70 (Hsp 70) family protein] -0.196 -0.042
103 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.193 0.075
104 253227_at AT4G35030 [Protein kinase superfamily protein] -0.192 -0.016