4.0:Information of module
atmyc2 cop1 Seedling BL
In comparison with seedlings-week-old RECA1-overexpressing transgenic help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0008152 metabolic process BP 3.892e-10
GO:0071704 organic substance metabolic process BP 4.322e-08
GO:0009611 response to wounding BP 1.047e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0005976 polysaccharide metabolic process BP 5.933e-10
GO:0044264 cellular polysaccharide metabolic proces... BP 2.643e-08
GO:0010383 cell wall polysaccharide metabolic proce... BP 3.564e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
atmyc2 cop1 Seedling BL		 Log2 signal ratio
seedlings-week-old RECA1-overexpressing transgenic
1 254101_at AT4G25000 AMY1, alpha-amylase-like, ATAMY1 0.897 0.025
2 254189_at AT4G24000 ATCSLG2, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G2, CSLG2, cellulose synthase like G2 0.723 -0.026
3 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.591 0.035
4 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.578 0.436
5 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 0.547 0.507
6 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 0.492 0.167
7 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.473 0.042
8 249622_at AT5G37550 unknown 0.463 -0.051
9 260031_at AT1G68790 CRWN3, CROWDED NUCLEI 3, LINC3, LITTLE NUCLEI3 0.460 -0.043
10 252170_at AT3G50480 HR4, homolog of RPW8 4 0.446 0.492
11 254251_at AT4G23300 CRK22, cysteine-rich RLK (RECEPTOR-like protein kinase) 22 0.426 0.012
12 246943_at AT5G25440 [Protein kinase superfamily protein] 0.419 0.377
13 264301_at AT1G78780 [pathogenesis-related family protein] 0.405 0.054
14 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C 0.389 0.003
15 246909_at AT5G25770 [alpha/beta-Hydrolases superfamily protein] 0.379 0.047
16 258975_at AT3G01970 ATWRKY45, WRKY DNA-BINDING PROTEIN 45, WRKY45, WRKY DNA-binding protein 45 0.376 0.463
17 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.374 0.104
18 260656_at AT1G19380 unknown 0.371 0.283
19 257624_at AT3G26220 CYP71B3, cytochrome P450, family 71, subfamily B, polypeptide 3 0.364 0.501
20 252068_at AT3G51440 [Calcium-dependent phosphotriesterase superfamily protein] 0.357 0.262
21 262940_at AT1G79520 [Cation efflux family protein] 0.357 -0.018
22 263536_at AT2G25000 ATWRKY60, WRKY60, WRKY DNA-binding protein 60 0.344 0.305
23 256425_at AT1G33560 ADR1, ACTIVATED DISEASE RESISTANCE 1 0.343 0.146
24 252563_at AT3G45970 ATEXLA1, expansin-like A1, ATEXPL1, ATHEXP BETA 2.1, EXLA1, expansin-like A1, EXPL1, EXPANSIN L1 0.341 0.089
25 254917_at AT4G11350 unknown 0.338 0.086
26 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.325 0.169
27 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.323 0.372
28 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] 0.322 0.266
29 264717_at AT1G70140 ATFH8, formin 8, FH8, formin 8 0.320 0.247
30 252618_at AT3G45140 ATLOX2, ARABIODOPSIS THALIANA LIPOXYGENASE 2, LOX2, lipoxygenase 2 0.314 -0.001
31 255429_at AT4G03410 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] 0.311 -0.006
32 267169_at AT2G37540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.311 0.104
33 250255_at AT5G13730 SIG4, sigma factor 4, SIGD 0.310 -0.179
34 256714_at AT2G34080 [Cysteine proteinases superfamily protein] 0.306 0.016
35 262096_at AT1G56010 anac021, Arabidopsis NAC domain containing protein 21, ANAC022, Arabidopsis NAC domain containing protein 22, NAC1, NAC domain containing protein 1 0.304 0.134
36 259696_at AT1G63150 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.302 -0.038
37 254594_at AT4G18930 [RNA ligase/cyclic nucleotide phosphodiesterase family protein] 0.293 0.099
38 257081_at AT3G30460 [RING/U-box superfamily protein] 0.284 -0.163
39 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.931 -0.379
40 248790_at AT5G47450 ATTIP2;3, ARABIDOPSIS THALIANA TONOPLAST INTRINSIC PROTEIN 2;3, DELTA-TIP3, DELTA-TONOPLAST INTRINSIC PROTEIN 3, TIP2;3, tonoplast intrinsic protein 2;3 -0.895 -0.456
41 253155_at AT4G35720 unknown -0.752 -0.134
42 262373_at AT1G73120 unknown -0.751 -0.081
43 254377_at AT4G21650 [Subtilase family protein] -0.678 -0.326
44 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.643 -0.040
45 262446_at AT1G49310 unknown -0.620 0.067
46 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 -0.620 -0.025
47 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.614 -0.214
48 261825_at AT1G11545 XTH8, xyloglucan endotransglucosylase/hydrolase 8 -0.533 -0.123
49 263002_at AT1G54200 unknown -0.520 -0.163
50 258552_at AT3G07010 [Pectin lyase-like superfamily protein] -0.513 -0.099
51 252317_at AT3G48720 DCF, DEFICIENT IN CUTIN FERULATE -0.487 -0.126
52 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor -0.477 -0.133
53 251968_at AT3G53100 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.449 -0.156
54 250958_at AT5G03260 LAC11, laccase 11 -0.435 -0.187
55 247951_at AT5G57240 ORP4C, OSBP(oxysterol binding protein)-related protein 4C -0.431 0.127
56 263264_at AT2G38810 HTA8, histone H2A 8 -0.423 -0.173
57 257151_at AT3G27200 [Cupredoxin superfamily protein] -0.409 -0.136
58 263276_at AT2G14100 CYP705A13, cytochrome P450, family 705, subfamily A, polypeptide 13 -0.409 -0.137
59 262388_at AT1G49320 unknown -0.389 -0.258
60 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 -0.389 0.455
61 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.388 -0.231
62 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 -0.382 0.097
63 254490_at AT4G20320 [CTP synthase family protein] -0.377 -0.259
64 267006_at AT2G34190 [Xanthine/uracil permease family protein] -0.372 -0.234
65 248646_at AT5G49100 unknown -0.362 -0.245
66 266007_at AT2G37380 MAKR3, MEMBRANE-ASSOCIATED KINASE REGULATOR 3 -0.358 -0.164
67 265250_at AT2G01950 BRL2, BRI1-like 2, VH1, VASCULAR HIGHWAY 1 -0.354 -0.197
68 258376_at AT3G17680 [Kinase interacting (KIP1-like) family protein] -0.353 -0.259
69 246425_at AT5G17420 ATCESA7, CESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRX3, IRREGULAR XYLEM 3, MUR10, MURUS 10 -0.345 -0.047
70 251806_at AT3G55370 OBP3, OBF-binding protein 3 -0.343 0.061
71 265265_at AT2G42900 [Plant basic secretory protein (BSP) family protein] -0.333 -0.179
72 245309_at AT4G15140 unknown -0.329 -0.042
73 250481_at AT5G10310 unknown -0.320 0.093
74 252594_at AT3G45680 [Major facilitator superfamily protein] -0.315 -0.104
75 254043_at AT4G25990 CIL -0.310 0.059