4.0:Information of module
W(Liq) L-AOPP+IPyA
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0008033 tRNA processing BP 4.485e-03
GO:0006400 tRNA modification BP 9.157e-03
GO:0071731 response to nitric oxide BP 9.157e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0005984 disaccharide metabolic process BP 3.077e-04
GO:0009311 oligosaccharide metabolic process BP 4.135e-04
GO:0043170 macromolecule metabolic process BP 8.613e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
W(Liq) L-AOPP+IPyA		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 258736_at AT3G05900 [neurofilament protein-related] 0.203 -1.036
2 261618_at AT1G33110 [MATE efflux family protein] 0.120 0.270
3 258727_at AT3G11930 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.101 0.133
4 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.096 0.019
5 256517_at AT1G66170 MMD1, MALE MEIOCYTE DEATH 1 0.095 0.009
6 251713_at AT3G56080 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.095 -0.182
7 258574_at AT3G04250 [F-box associated ubiquitination effector family protein] 0.090 0.070
8 249416_at AT5G39570 unknown 0.088 0.061
9 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.088 0.077
10 262269_at AT1G42393 unknown 0.086 0.080
11 264729_at AT1G22990 HIPP22, heavy metal associated isoprenylated plant protein 22 0.086 0.262
12 251767_at AT3G55930 [Pre-mRNA-splicing factor 3] 0.086 0.103
13 252750_at AT3G43420 unknown 0.085 0.125
14 256566_at AT3G19530 unknown 0.084 0.078
15 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.083 0.567
16 246830_at AT5G26360 [TCP-1/cpn60 chaperonin family protein] 0.083 -0.126
17 266215_at AT2G06850 EXGT-A1, endoxyloglucan transferase A1, EXT, ENDOXYLOGLUCAN TRANSFERASE, XTH4, xyloglucan endotransglucosylase/hydrolase 4 0.083 -0.919
18 260501_at AT2G41770 unknown 0.081 -0.048
19 254032_at AT4G25940 [ENTH/ANTH/VHS superfamily protein] 0.081 0.228
20 253656_at AT4G30090 unknown 0.080 0.074
21 261246_at AT1G20080 ATSYTB, NTMC2T1.2, NTMC2TYPE1.2, SYT2, synaptotagmin 2, SYTB 0.080 0.044
22 262418_at AT1G50320 ATHX, thioredoxin X, ATX, THIOREDOXIN X, THX, thioredoxin X 0.080 0.009
23 266283_at AT2G29210 [splicing factor PWI domain-containing protein] 0.079 -0.000
24 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 0.079 -0.137
25 257794_at AT3G27050 unknown 0.078 -0.108
26 248500_at AT5G50410 unknown 0.077 -0.112
27 264554_at AT1G09510 [NAD(P)-binding Rossmann-fold superfamily protein] 0.075 0.414
28 258954_at AT3G01400 [ARM repeat superfamily protein] 0.075 0.087
29 257128_at AT3G20080 CYP705A15, cytochrome P450, family 705, subfamily A, polypeptide 15 0.073 0.150
30 267455_at AT2G33760 [Pentatricopeptide repeat (PPR) superfamily protein] 0.073 -0.053
31 250567_at AT5G08090 unknown 0.072 0.078
32 259486_at AT1G15710 [prephenate dehydrogenase family protein] 0.072 -0.121
33 256365_at AT1G66530 [Arginyl-tRNA synthetase, class Ic] 0.071 -0.200
34 246400_at AT1G57540 unknown 0.071 0.051
35 257703_at AT3G12640 [RNA binding (RRM/RBD/RNP motifs) family protein] 0.071 0.152
36 257675_at AT3G20310 ATERF-7, ATERF7, ERF7, ethylene response factor 7 0.070 0.124
37 251030_at AT5G02130 NDP1 0.069 0.110
38 254151_at AT4G24390 AFB4, auxin signaling F-box 4 0.067 -0.031
39 260128_at AT1G36310 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.067 -0.121
40 248715_at AT5G48290 [Heavy metal transport/detoxification superfamily protein ] -0.126 0.414
41 246154_at AT5G19940 [Plastid-lipid associated protein PAP / fibrillin family protein] -0.123 -0.278
42 247868_at AT5G57620 AtMYB36, myb domain protein 36, MYB36, myb domain protein 36 -0.122 0.082
43 253494_at AT4G31830 unknown -0.115 0.058
44 259707_at AT1G77490 TAPX, thylakoidal ascorbate peroxidase -0.110 -0.291
45 266716_at AT2G46820 CURT1B, CURVATURE THYLAKOID 1B, PSAP, PSI-P, photosystem I P subunit, PTAC8, PLASTID TRANSCRIPTIONALLY ACTIVE 8, TMP14, THYLAKOID MEMBRANE PHOSPHOPROTEIN OF 14 KDA -0.100 -0.322
46 254475_at AT4G20440 smB, small nuclear ribonucleoprotein associated protein B -0.087 -0.091
47 251944_at AT3G53510 ABCG20, ATP-binding cassette G20 -0.081 0.111
48 254460_at AT4G21210 ATRP1, PPDK regulatory protein, RP1, PPDK regulatory protein -0.081 -0.306
49 254006_at AT4G26340 [F-box/RNI-like/FBD-like domains-containing protein] -0.078 0.030
50 265783_at AT2G07455 [Athila retroelement ORF1 protein -related, temporary automated functional assignment] -0.072 0.033
51 248960_at AT5G45640 [Subtilisin-like serine endopeptidase family protein] -0.071 -0.001
52 259207_at AT3G09050 unknown -0.070 -0.639
53 250381_at AT5G11610 [Exostosin family protein] -0.067 -0.348
54 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.066 -0.636
55 249272_at AT5G41820 ATRGTA2, RAB geranylgeranyl transferase alpha subunit 2, RGTA2, RAB geranylgeranyl transferase alpha subunit 2 -0.064 -0.019
56 260802_at AT1G78400 [Pectin lyase-like superfamily protein] -0.064 0.150
57 251897_at AT3G54360 NCA1, NO CATALASE ACTIVITY 1 -0.063 0.078
58 266301_at AT2G26960 AtMYB81, myb domain protein 81, MYB81, myb domain protein 81 -0.062 -0.042
59 245963_at AT5G19710 unknown -0.061 0.101
60 250033_at AT5G18110 NCBP, novel cap-binding protein -0.061 0.240
61 252254_at AT3G49250 DMS3, DEFECTIVE IN MERISTEM SILENCING 3, IDN1, INVOLVED IN DE NOVO 1 -0.060 -0.287
62 259590_at AT1G28160 [Integrase-type DNA-binding superfamily protein] -0.059 0.075
63 263372_at AT2G20450 [Ribosomal protein L14] -0.056 -0.176
64 265057_at AT1G52140 unknown -0.054 0.200
65 247957_at AT5G57050 ABI2, ABA INSENSITIVE 2, AtABI2 -0.053 0.340
66 252136_at AT3G50770 CML41, calmodulin-like 41 -0.053 0.681
67 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 -0.053 0.655
68 264920_at AT1G60550 DHNS, ECHID, enoyl-CoA hydratase/isomerase D -0.052 -0.481
69 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.051 0.915
70 265283_at AT2G20370 AtMUR3, KAM1, KATAMARI 1, MUR3, MURUS 3, RSA3, SHORT ROOT IN SALT MEDIUM 3 -0.049 0.122
71 247572_at AT5G61220 [LYR family of Fe/S cluster biogenesis protein] -0.048 -0.105
72 257433_at AT2G21990 unknown -0.047 0.075
73 245834_at AT1G42200 [CACTA-like transposase family (Ptta/En/Spm), has a 2.3e-27 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.046 0.113
74 256786_at AT3G13740 [Ribonuclease III family protein] -0.044 -0.545
75 266570_at AT2G24090 PRPL35, plastid ribosomal protein L35 -0.044 -0.578
76 254482_at AT4G20370 TSF, TWIN SISTER OF FT -0.044 0.081
77 265279_at AT2G28460 [Cysteine/Histidine-rich C1 domain family protein] -0.043 -0.102
78 260063_at AT1G73720 SMU1, SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.043 0.005