4.0:Information of module
Col0 roots 2hr KNO3 nitrogen
In comparison with Brz220 12 h  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0090304 nucleic acid metabolic process BP 2.110e-03
GO:0043170 macromolecule metabolic process BP 4.758e-03
GO:0044260 cellular macromolecule metabolic process BP 5.224e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0035670 plant-type ovary development BP 1.597e-04
GO:0048481 ovule development BP 1.597e-04
GO:0048440 carpel development BP 1.890e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col0 roots 2hr KNO3 nitrogen		 Log2 signal ratio
Brz220 12 h
1 261842_at AT1G16160 WAKL5, wall associated kinase-like 5 0.263 0.145
2 246110_at AT5G20140 AtHBP5, HBP5, haem-binding protein 5 0.232 0.022
3 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] 0.229 0.070
4 264911_at AT1G60690 [NAD(P)-linked oxidoreductase superfamily protein] 0.227 -0.018
5 251844_at AT3G54630 unknown 0.194 -0.021
6 260506_at AT1G47210 CYCA3;2, cyclin-dependent protein kinase 3;2 0.184 0.059
7 256896_at AT3G24630 TRM34, TON1 Recruiting Motif 34 0.177 0.000
8 258461_at AT3G17340 [ARM repeat superfamily protein] 0.169 0.109
9 250595_at AT5G07770 AtFH16, FH16, formin homolog 16 0.168 -0.126
10 257980_at AT3G20760 [Nse4, component of Smc5/6 DNA repair complex] 0.144 0.095
11 253674_at AT4G29540 AtLpxA, LpxA 0.143 0.137
12 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 -0.254 -0.013
13 261803_at AT1G30500 NF-YA7, nuclear factor Y, subunit A7 -0.237 -0.101
14 261261_at AT1G26730 [EXS (ERD1/XPR1/SYG1) family protein] -0.200 0.002
15 246459_at AT5G16900 [Leucine-rich repeat protein kinase family protein] -0.182 -0.067
16 251245_at AT3G62090 PIF6, PHYTOCHROME-INTERACTING FACTOR 6, PIL2, phytochrome interacting factor 3-like 2 -0.173 -0.049
17 261708_at AT1G32740 [SBP (S-ribonuclease binding protein) family protein] -0.167 0.040
18 254715_at AT4G13550 [triglyceride lipases] -0.161 0.069
19 266767_at AT2G46910 [Plastid-lipid associated protein PAP / fibrillin family protein] -0.157 -0.029
20 247783_at AT5G58800 [Quinone reductase family protein] -0.138 -0.070
21 250953_at AT5G03415 ATDPB, DPB -0.130 0.006