4.0:Information of module
Col0 roots 2hr KNO3 nitrogen
In comparison with 2hr continuous KNO3 and MSX PeR cell help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0090304 nucleic acid metabolic process BP 2.110e-03
GO:0043170 macromolecule metabolic process BP 4.758e-03
GO:0044260 cellular macromolecule metabolic process BP 5.224e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0035670 plant-type ovary development BP 1.597e-04
GO:0048481 ovule development BP 1.597e-04
GO:0048440 carpel development BP 1.890e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col0 roots 2hr KNO3 nitrogen		 Log2 signal ratio
2hr continuous KNO3 and MSX PeR cell
1 261842_at AT1G16160 WAKL5, wall associated kinase-like 5 0.263 0.304
2 246110_at AT5G20140 AtHBP5, HBP5, haem-binding protein 5 0.232 -0.069
3 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] 0.229 -0.006
4 264911_at AT1G60690 [NAD(P)-linked oxidoreductase superfamily protein] 0.227 0.065
5 251844_at AT3G54630 unknown 0.194 -0.075
6 260506_at AT1G47210 CYCA3;2, cyclin-dependent protein kinase 3;2 0.184 0.085
7 256896_at AT3G24630 TRM34, TON1 Recruiting Motif 34 0.177 0.115
8 258461_at AT3G17340 [ARM repeat superfamily protein] 0.169 0.047
9 250595_at AT5G07770 AtFH16, FH16, formin homolog 16 0.168 0.113
10 257980_at AT3G20760 [Nse4, component of Smc5/6 DNA repair complex] 0.144 0.057
11 253674_at AT4G29540 AtLpxA, LpxA 0.143 0.005
12 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 -0.254 0.054
13 261803_at AT1G30500 NF-YA7, nuclear factor Y, subunit A7 -0.237 -0.170
14 261261_at AT1G26730 [EXS (ERD1/XPR1/SYG1) family protein] -0.200 -0.003
15 246459_at AT5G16900 [Leucine-rich repeat protein kinase family protein] -0.182 0.122
16 251245_at AT3G62090 PIF6, PHYTOCHROME-INTERACTING FACTOR 6, PIL2, phytochrome interacting factor 3-like 2 -0.173 0.005
17 261708_at AT1G32740 [SBP (S-ribonuclease binding protein) family protein] -0.167 -0.163
18 254715_at AT4G13550 [triglyceride lipases] -0.161 -0.046
19 266767_at AT2G46910 [Plastid-lipid associated protein PAP / fibrillin family protein] -0.157 0.014
20 247783_at AT5G58800 [Quinone reductase family protein] -0.138 -0.132
21 250953_at AT5G03415 ATDPB, DPB -0.130 -0.138