4.0:Information of module
IAA 2h
In comparison with Col upon hypoxia 6 hrs help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 7.007e-19
GO:0010583 response to cyclopentenone BP 5.343e-16
GO:0065007 biological regulation BP 2.946e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0005976 polysaccharide metabolic process BP 1.458e-11
GO:0071554 cell wall organization or biogenesis BP 3.698e-11
GO:0008202 steroid metabolic process BP 3.031e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IAA 2h		 Log2 signal ratio
Col upon hypoxia 6 hrs
1 266611_at AT2G14960 GH3.1 1.083 0.029
2 250709_at AT5G06080 LBD33, LOB domain-containing protein 33 1.054 -0.011
3 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 1.009 -0.043
4 245076_at AT2G23170 GH3.3 0.997 0.489
5 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.897 0.049
6 257386_at AT2G42440 ASL15, ASYMMETRIC LEAVES 2-like 15, LBD17, LOB domain-containing protein 17 0.888 0.048
7 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 0.879 0.049
8 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 0.870 0.142
9 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 0.863 0.139
10 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.834 -0.043
11 247179_at AT5G65320 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.833 -0.093
12 249992_at AT5G18560 PUCHI 0.829 -0.011
13 250091_at AT5G17340 [Putative membrane lipoprotein] 0.816 0.015
14 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.810 -0.004
15 252103_at AT3G51410 unknown 0.793 0.046
16 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.788 -0.045
17 252279_at AT3G49700 ACS9, 1-aminocyclopropane-1-carboxylate synthase 9, AtACS9, ETO3, ETHYLENE OVERPRODUCING 3 0.786 0.032
18 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.767 0.004
19 253047_at AT4G37295 unknown 0.716 0.126
20 259027_at AT3G09280 unknown 0.693 0.307
21 263363_at AT2G03850 [Late embryogenesis abundant protein (LEA) family protein] 0.662 0.014
22 253910_at AT4G27290 [S-locus lectin protein kinase family protein] 0.661 0.314
23 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 0.654 -0.001
24 263436_at AT2G28690 unknown 0.651 0.193
25 262001_at AT1G33790 [jacalin lectin family protein] 0.646 0.203
26 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.644 0.065
27 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.636 0.838
28 253180_at AT4G35210 unknown 0.630 -0.021
29 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.612 0.218
30 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.603 0.048
31 246576_at AT1G31650 ATROPGEF14, ROPGEF14, ROP (rho of plants) guanine nucleotide exchange factor 14 0.595 0.097
32 253908_at AT4G27260 GH3.5, WES1 0.590 0.120
33 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 0.589 -0.110
34 259735_at AT1G64405 unknown 0.589 0.039
35 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.571 0.008
36 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.568 -0.029
37 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.562 0.022
38 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 0.562 0.242
39 266637_at AT2G35600 ATBRXL1, ARABIDOPSIS THALIANA BREVIS RADIX LIKE 1, BRXL1, BREVIS RADIX-like 1 0.560 0.149
40 265769_at AT2G48090 unknown 0.552 -0.283
41 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.546 -0.030
42 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 0.544 0.911
43 264537_at AT1G55610 BRL1, BRI1 like 0.543 -0.111
44 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.518 0.533
45 262760_at AT1G10770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.509 0.302
46 247474_at AT5G62280 unknown 0.501 0.012
47 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.497 -0.031
48 245416_at AT4G17350 unknown 0.481 0.000
49 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.475 -0.182
50 252312_at AT3G49380 iqd15, IQ-domain 15 0.466 -0.010
51 258253_at AT3G26760 [NAD(P)-binding Rossmann-fold superfamily protein] 0.466 0.002
52 258878_at AT3G03170 unknown 0.459 -0.190
53 247643_at AT5G60450 ARF4, auxin response factor 4 0.447 0.005
54 266507_at AT2G47860 SETH6 0.440 -0.085
55 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.429 0.220
56 248456_at AT5G51380 [RNI-like superfamily protein] 0.423 0.031
57 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.415 0.380
58 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.413 0.407
59 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.410 0.118
60 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 0.410 -0.028
61 258907_at AT3G06370 ATNHX4, NHX4, sodium hydrogen exchanger 4 0.409 0.208
62 262971_at AT1G75640 [Leucine-rich receptor-like protein kinase family protein] 0.407 -0.124
63 263736_at AT1G60000 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.401 0.071
64 247904_at AT5G57390 AIL5, AINTEGUMENTA-like 5, CHO1, CHOTTO 1, EMK, EMBRYOMAKER, PLT5, PLETHORA 5 0.399 0.099
65 258718_at AT3G09760 [RING/U-box superfamily protein] 0.390 -0.294
66 251358_at AT3G61160 [Protein kinase superfamily protein] 0.389 -0.112
67 263737_at AT1G60010 unknown 0.386 0.051
68 256981_at AT3G13380 BRL3, BRI1-like 3 0.386 0.020
69 266663_at AT2G25790 SKM1, STERILITY-REGULATING KINASE MEMBER 1 0.383 -0.199
70 250803_at AT5G04980 [DNAse I-like superfamily protein] 0.381 0.273
71 259858_at AT1G68400 [leucine-rich repeat transmembrane protein kinase family protein] 0.378 -0.023
72 251925_at AT3G54000 unknown 0.375 -0.138
73 251160_at AT3G63240 [DNAse I-like superfamily protein] 0.372 0.159
74 264040_at AT2G03730 ACR5, ACT domain repeat 5 0.369 0.136
75 259018_at AT3G07390 AIR12, Auxin-Induced in Root cultures 12 0.368 -0.078
76 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.364 -0.044
77 253419_at AT4G32780 [phosphoinositide binding] 0.358 -0.055
78 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 0.348 -0.288
79 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.346 0.603
80 259268_at AT3G01070 AtENODL16, ENODL16, early nodulin-like protein 16 0.343 0.069
81 259421_at AT1G13910 [Leucine-rich repeat (LRR) family protein] 0.341 -0.046
82 264900_at AT1G23080 ATPIN7, ARABIDOPSIS PIN-FORMED 7, PIN7, PIN-FORMED 7 0.337 -0.220
83 257922_at AT3G23150 ETR2, ethylene response 2 0.336 0.320
84 260058_at AT1G78100 AUF1, auxin up-regulated f-box protein 1 0.326 -0.030
85 253008_at AT4G38210 ATEXP20, ATEXPA20, expansin A20, ATHEXP ALPHA 1.23, EXP20, EXPANSIN 20, EXPA20, expansin A20 0.323 -0.035
86 247070_at AT5G66815 unknown -1.105 0.623
87 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -1.002 -0.735
88 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] -0.784 -0.485
89 266066_at AT2G18800 ATXTH21, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21, XTH21, xyloglucan endotransglucosylase/hydrolase 21 -0.733 -0.146
90 253309_at AT4G33790 CER4, ECERIFERUM 4, FAR3, FATTY ACID REDUCTASE 3, G7 -0.689 -0.275
91 255608_at AT4G01140 unknown -0.675 -0.308
92 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 -0.659 -0.212
93 249768_at AT5G24100 [Leucine-rich repeat protein kinase family protein] -0.653 -0.027
94 255877_at AT2G40460 [Major facilitator superfamily protein] -0.650 -0.704
95 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 -0.638 0.104
96 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 -0.613 -0.003
97 245546_at AT4G15290 ATCSLB05, ATCSLB5, CELLULOSE SYNTHASE LIKE 5, CSLB05 -0.607 -0.456
98 254606_at AT4G19030 AT-NLM1, ATNLM1, NOD26-LIKE MAJOR INTRINSIC PROTEIN 1, NIP1;1, NOD26-LIKE INTRINSIC PROTEIN 1;1, NLM1, NOD26-like major intrinsic protein 1 -0.592 -0.219
99 266900_at AT2G34610 unknown -0.580 -0.858
100 255450_at AT4G02850 [phenazine biosynthesis PhzC/PhzF family protein] -0.544 0.080
101 254090_at AT4G25010 AtSWEET14, SWEET14 -0.530 -0.060
102 246429_at AT5G17450 HIPP21, heavy metal associated isoprenylated plant protein 21 -0.528 0.032
103 256515_at AT1G66020 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.519 -0.227
104 256762_at AT3G25655 IDL1, inflorescence deficient in abscission (IDA)-like 1 -0.517 -0.279
105 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 -0.513 -0.317
106 260067_at AT1G73780 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.498 -0.256
107 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.497 -0.259
108 263841_at AT2G36870 AtXTH32, XTH32, xyloglucan endotransglucosylase/hydrolase 32 -0.495 -0.128
109 250165_at AT5G15290 CASP5, Casparian strip membrane domain protein 5 -0.482 -0.570
110 253957_at AT4G26320 AGP13, arabinogalactan protein 13 -0.479 -0.099
111 247945_at AT5G57150 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.477 -0.173
112 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.467 -0.216
113 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.467 0.138
114 251116_at AT3G63470 scpl40, serine carboxypeptidase-like 40 -0.450 -0.221
115 260806_at AT1G78260 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.447 -0.216
116 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.437 -0.131
117 258938_at AT3G10080 [RmlC-like cupins superfamily protein] -0.434 -0.171
118 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] -0.426 -0.127
119 247406_at AT5G62920 ARR6, response regulator 6 -0.422 -0.149
120 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 -0.421 0.105
121 250872_at AT5G03960 IQD12, IQ-domain 12 -0.417 -0.040
122 245965_at AT5G19730 [Pectin lyase-like superfamily protein] -0.412 0.017
123 256275_at AT3G12110 ACT11, actin-11 -0.410 -0.079
124 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] -0.409 0.032
125 264501_at AT1G09390 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.400 -0.204
126 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.382 0.020
127 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.370 -0.154
128 261926_at AT1G22530 PATL2, PATELLIN 2 -0.366 -0.238
129 264842_at AT1G03700 [Uncharacterised protein family (UPF0497)] -0.361 -0.044
130 259351_at AT3G05150 [Major facilitator superfamily protein] -0.356 0.004
131 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.348 0.029
132 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] -0.346 0.109
133 252341_at AT3G48940 [Remorin family protein] -0.343 -0.236
134 255957_at AT1G22160 unknown -0.343 -0.469
135 258013_at AT3G19320 [Leucine-rich repeat (LRR) family protein] -0.337 0.330
136 265134_at AT1G51260 LPAT3, lysophosphatidyl acyltransferase 3 -0.332 -0.044
137 247189_at AT5G65390 AGP7, arabinogalactan protein 7 -0.328 -0.069
138 265246_at AT2G43050 ATPMEPCRD -0.327 -0.038
139 262569_at AT1G15180 [MATE efflux family protein] -0.322 0.055
140 251858_at AT3G54820 PIP2;5, plasma membrane intrinsic protein 2;5, PIP2D, PLASMA MEMBRANE INTRINSIC PROTEIN 2D -0.316 -0.068
141 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.316 -0.207
142 248408_at AT5G51520 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.310 -0.383
143 254294_at AT4G23070 ATRBL7, RHOMBOID-like protein 7, RBL7, RHOMBOID-like protein 7 -0.309 -0.152
144 264209_at AT1G22740 ATRABG3B, RAB7, RAB75, RABG3B, RAB GTPase homolog G3B -0.305 -0.131
145 258528_at AT3G06770 [Pectin lyase-like superfamily protein] -0.304 -0.051
146 250437_at AT5G10430 AGP4, arabinogalactan protein 4, ATAGP4 -0.303 -0.075
147 245568_at AT4G14650 unknown -0.302 0.012
148 265066_at AT1G03870 FLA9, FASCICLIN-like arabinoogalactan 9 -0.300 -0.146
149 249018_at AT5G44770 [Cysteine/Histidine-rich C1 domain family protein] -0.294 -0.068
150 252236_at AT3G49930 [C2H2 and C2HC zinc fingers superfamily protein] -0.291 -0.299
151 262704_at AT1G16530 ASL9, ASYMMETRIC LEAVES 2-like 9, LBD3, LOB DOMAIN-CONTAINING PROTEIN 3 -0.289 0.007
152 246535_at AT5G15900 TBL19, TRICHOME BIREFRINGENCE-LIKE 19 -0.289 -0.098
153 246900_at AT5G25620 AtYUC6, YUC6, YUCCA6 -0.286 -0.029
154 263207_at AT1G10550 XET, XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33, XTH33, xyloglucan:xyloglucosyl transferase 33 -0.286 -0.098
155 248407_at AT5G51500 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.286 -0.212
156 251143_at AT5G01220 SQD2, sulfoquinovosyldiacylglycerol 2 -0.286 -0.256
157 256968_at AT3G21070 ATNADK-1, NAD KINASE 1, NADK1, NAD kinase 1 -0.284 -0.246
158 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 -0.280 -0.142
159 247533_at AT5G61570 [Protein kinase superfamily protein] -0.280 -0.097
160 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 -0.279 0.119
161 245176_at AT2G47440 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.279 -0.076
162 263176_at AT1G05530 UGT2, UDP-GLUCOSYL TRANSFERASE 2, UGT75B2, UDP-glucosyl transferase 75B2 -0.277 -0.065
163 261594_at AT1G33240 AT-GTL1, GT2-LIKE 1, ATGTL1, GTL1, GT-2-like 1 -0.276 0.010
164 252886_at AT4G39350 ATCESA2, ATH-A, CESA2, cellulose synthase A2 -0.272 -0.030
165 248778_at AT5G47940 unknown -0.268 -0.143
166 267003_at AT2G34340 unknown -0.267 -0.188
167 262575_at AT1G15210 ABCG35, ATP-binding cassette G35, ATPDR7, PLEIOTROPIC DRUG RESISTANCE 7, PDR7, pleiotropic drug resistance 7 -0.265 -0.035
168 247707_at AT5G59450 [GRAS family transcription factor] -0.264 -0.218
169 256154_at AT3G08490 unknown -0.262 -0.191