4.0:Information of module
IAA 0.5h
In comparison with aerial organ callus inducing medium 12 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 6.870e-24
GO:0009719 response to endogenous stimulus BP 2.047e-20
GO:0009725 response to hormone BP 4.708e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009812 flavonoid metabolic process BP 4.871e-04
GO:0009813 flavonoid biosynthetic process BP 8.308e-04
GO:0042445 hormone metabolic process BP 2.269e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IAA 0.5h		 Log2 signal ratio
aerial organ callus inducing medium 12 h
1 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 0.992 0.650
2 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.899 0.486
3 266611_at AT2G14960 GH3.1 0.791 0.609
4 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 0.774 0.044
5 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 0.742 0.125
6 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.682 0.057
7 248789_at AT5G47440 unknown 0.667 -0.145
8 257386_at AT2G42440 ASL15, ASYMMETRIC LEAVES 2-like 15, LBD17, LOB domain-containing protein 17 0.661 0.428
9 259027_at AT3G09280 unknown 0.648 0.060
10 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.635 0.519
11 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.603 0.185
12 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.581 0.883
13 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.581 0.288
14 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 0.578 0.464
15 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.573 0.038
16 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.567 0.668
17 250940_at AT5G03310 SAUR44, SMALL AUXIN UPREGULATED RNA 44 0.564 0.072
18 247622_at AT5G60350 unknown 0.547 0.006
19 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.547 0.454
20 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.535 0.129
21 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.515 0.260
22 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.505 0.181
23 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.505 0.302
24 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.502 0.336
25 252765_at AT3G42800 unknown 0.500 0.278
26 253908_at AT4G27260 GH3.5, WES1 0.487 0.331
27 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.486 0.479
28 252103_at AT3G51410 unknown 0.481 0.380
29 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 0.468 0.429
30 253047_at AT4G37295 unknown 0.449 0.484
31 264511_at AT1G09350 AtGolS3, galactinol synthase 3, GolS3, galactinol synthase 3 0.449 0.325
32 258907_at AT3G06370 ATNHX4, NHX4, sodium hydrogen exchanger 4 0.448 0.005
33 253910_at AT4G27290 [S-locus lectin protein kinase family protein] 0.435 0.079
34 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 0.433 0.515
35 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 0.431 -0.549
36 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.429 0.225
37 249992_at AT5G18560 PUCHI 0.428 0.184
38 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.421 0.313
39 251751_at AT3G55720 unknown 0.418 0.317
40 251940_at AT3G53450 LOG4, LONELY GUY 4 0.414 -0.066
41 247492_at AT5G61890 [Integrase-type DNA-binding superfamily protein] 0.413 0.467
42 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.400 -0.027
43 259681_at AT1G77760 GNR1, NIA1, nitrate reductase 1, NR1, NITRATE REDUCTASE 1 0.398 0.007
44 258253_at AT3G26760 [NAD(P)-binding Rossmann-fold superfamily protein] 0.383 0.158
45 248801_at AT5G47370 HAT2 0.379 0.165
46 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 0.378 -0.510
47 267250_at AT2G23060 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.373 0.116
48 247474_at AT5G62280 unknown 0.369 0.292
49 266637_at AT2G35600 ATBRXL1, ARABIDOPSIS THALIANA BREVIS RADIX LIKE 1, BRXL1, BREVIS RADIX-like 1 0.368 0.113
50 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.577 -0.025
51 266900_at AT2G34610 unknown -0.449 0.028
52 256788_at AT3G13730 CYP90D1, cytochrome P450, family 90, subfamily D, polypeptide 1 -0.377 -0.128
53 252594_at AT3G45680 [Major facilitator superfamily protein] -0.314 -0.226
54 248203_at AT5G54230 AtMYB49, myb domain protein 49, MYB49, myb domain protein 49 -0.299 -0.061
55 252236_at AT3G49930 [C2H2 and C2HC zinc fingers superfamily protein] -0.297 0.010
56 264305_at AT1G78815 LSH7, LIGHT SENSITIVE HYPOCOTYLS 7 -0.294 -0.181
57 261073_at AT1G07300 [josephin protein-related] -0.292 -0.196
58 256066_at AT1G06980 unknown -0.276 -0.017
59 255877_at AT2G40460 [Major facilitator superfamily protein] -0.274 -0.542
60 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 -0.258 -0.179
61 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 -0.252 -0.476
62 250872_at AT5G03960 IQD12, IQ-domain 12 -0.252 0.213
63 246900_at AT5G25620 AtYUC6, YUC6, YUCCA6 -0.245 -0.126
64 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.244 -0.398
65 247880_at AT5G57780 P1R1, P1R1 -0.242 -0.033
66 245560_at AT4G15480 UGT84A1 -0.233 -0.078
67 258528_at AT3G06770 [Pectin lyase-like superfamily protein] -0.225 0.009
68 256450_at AT1G75290 [NAD(P)-binding Rossmann-fold superfamily protein] -0.225 0.090
69 246231_at AT4G37080 unknown -0.223 -0.404
70 262811_at AT1G11700 unknown -0.220 -0.358
71 251113_at AT5G01370 ACI1, ALC-interacting protein 1, TRM29, TON1 Recruiting Motif 29 -0.218 -0.161
72 250882_at AT5G04000 unknown -0.216 -0.138
73 260155_at AT1G52870 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] -0.201 -0.374
74 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.195 0.145
75 254263_at AT4G23493 unknown -0.193 -0.052
76 250908_at AT5G03680 PTL, PETAL LOSS -0.192 -0.076
77 256621_at AT3G24450 [Heavy metal transport/detoxification superfamily protein ] -0.192 0.246
78 249184_at AT5G43020 [Leucine-rich repeat protein kinase family protein] -0.188 -0.200
79 252537_at AT3G45710 [Major facilitator superfamily protein] -0.188 0.057
80 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.186 -0.560
81 246969_at AT5G24880 unknown -0.185 -0.019
82 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.179 -0.340
83 264238_at AT1G54740 unknown -0.176 -0.276
84 251713_at AT3G56080 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.169 -0.644
85 246580_at AT1G31770 ABCG14, ATP-binding cassette G14 -0.169 -0.201
86 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 -0.168 0.076
87 266635_at AT2G35470 unknown -0.168 0.006
88 257483_at AT1G49620 AtKRP7, ICK5, ICN6, KRP7, KIP-RELATED PROTEIN 7 -0.166 -0.048
89 263841_at AT2G36870 AtXTH32, XTH32, xyloglucan endotransglucosylase/hydrolase 32 -0.165 -0.139
90 254431_at AT4G20840 [FAD-binding Berberine family protein] -0.164 -0.031
91 246316_at AT3G56890 [F-box associated ubiquitination effector family protein] -0.161 0.037
92 253794_at AT4G28720 YUC8, YUCCA 8 -0.161 0.284
93 248004_at AT5G56230 PRA1.G2, prenylated RAB acceptor 1.G2 -0.150 0.046
94 252628_at AT3G44960 unknown -0.148 -0.093
95 255511_at AT4G02075 PIT1, pitchoun 1 -0.146 0.050
96 247340_at AT5G63700 [zinc ion binding] -0.142 -0.162
97 254133_at AT4G24810 [Protein kinase superfamily protein] -0.142 -0.265