4.0:Information of module
cat2-2; harvested 8h continiously maintained in high CO2;
In comparison with pnp1-1 1wk +P help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0043473 pigmentation BP 1.303e-07
GO:0043476 pigment accumulation BP 1.303e-07
GO:0043478 pigment accumulation in response to UV l... BP 1.303e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006397 mRNA processing BP 5.274e-03
GO:0000398 mRNA splicing, via spliceosome BP 2.034e-02
GO:0000375 RNA splicing, via transesterification re... BP 2.383e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;		 Log2 signal ratio
pnp1-1 1wk +P
1 251772_at AT3G55920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 1.035 -0.004
2 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 0.211 0.110
3 266946_at AT2G18890 [Protein kinase superfamily protein] 0.154 -0.370
4 262359_at AT1G73066 [Leucine-rich repeat family protein] 0.147 -0.056
5 263073_at AT2G17500 [Auxin efflux carrier family protein] 0.147 -0.032
6 260921_at AT1G21540 [AMP-dependent synthetase and ligase family protein] 0.146 0.236
7 255005_at AT4G09990 GXM2, glucuronoxylan methyltransferase 2 0.144 -0.083
8 261289_at AT1G37000 [Beta-galactosidase related protein] 0.141 -0.134
9 256025_at AT1G58370 ATXYN1, ARABIDOPSIS THALIANA XYLANASE 1, RXF12 0.129 0.101
10 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.128 0.114
11 261647_at AT1G27740 RSL4, root hair defective 6-like 4 0.123 -0.026
12 266263_at AT2G27570 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.120 0.018
13 255371_at AT4G04110 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.120 -0.008
14 252160_at AT3G50570 [hydroxyproline-rich glycoprotein family protein] 0.118 0.062
15 247879_at AT5G57770 unknown 0.118 0.056
16 252365_at AT3G48350 CEP3, cysteine endopeptidase 3 0.118 0.152
17 253034_at AT4G38230 ATCPK26, ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26, CPK26, calcium-dependent protein kinase 26 0.116 -0.032
18 256867_at AT3G26390 unknown 0.115 0.074
19 255150_at AT4G08160 [glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein] 0.115 -0.046
20 267013_at AT2G39180 ATCRR2, CCR2, CRINKLY4 related 2 0.113 0.051
21 250878_at AT5G04050 [RNA-directed DNA polymerase (reverse transcriptase)] 0.112 0.001
22 253174_at AT4G35090 CAT2, catalase 2 -0.499 -0.021
23 267411_at AT2G34930 [disease resistance family protein / LRR family protein] -0.334 0.210
24 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.306 0.549
25 251743_at AT3G55890 [Yippee family putative zinc-binding protein] -0.268 0.072
26 262788_at AT1G10690 unknown -0.192 0.069
27 264766_at AT1G61420 [S-locus lectin protein kinase family protein] -0.128 0.018
28 245156_at AT5G12480 CPK7, calmodulin-domain protein kinase 7 -0.122 0.032
29 254886_at AT4G11760 LCR17, low-molecular-weight cysteine-rich 17 -0.112 0.102
30 247809_at AT5G58280 [AP2/B3-like transcriptional factor family protein] -0.103 0.041
31 246321_at AT1G16640 [AP2/B3-like transcriptional factor family protein] -0.098 -0.037
32 250335_at AT5G11650 [alpha/beta-Hydrolases superfamily protein] -0.094 0.115
33 245666_at AT1G28280 [VQ motif-containing protein] -0.090 0.071
34 246179_at AT5G28440 unknown -0.078 0.155
35 255434_at AT4G03180 unknown -0.077 -0.018
36 257419_at AT1G30800 [Fasciclin-like arabinogalactan family protein] -0.072 -0.080
37 261070_at AT1G07390 AtRLP1, receptor like protein 1, RLP1, receptor like protein 1 -0.072 0.161
38 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 -0.066 0.025
39 252608_at AT3G45090 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.048 0.049
40 248091_at AT5G55120 galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases -0.048 0.229
41 258493_at AT3G02555 unknown -0.045 -0.070