4.0:Information of module
cat2-2; harvested 8h continiously maintained in high CO2;
In comparison with vtc2 (I) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0043473 pigmentation BP 1.303e-07
GO:0043476 pigment accumulation BP 1.303e-07
GO:0043478 pigment accumulation in response to UV l... BP 1.303e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006397 mRNA processing BP 5.274e-03
GO:0000398 mRNA splicing, via spliceosome BP 2.034e-02
GO:0000375 RNA splicing, via transesterification re... BP 2.383e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;		 Log2 signal ratio
vtc2 (I)
1 251772_at AT3G55920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 1.035 0.046
2 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 0.211 0.130
3 266946_at AT2G18890 [Protein kinase superfamily protein] 0.154 -0.186
4 262359_at AT1G73066 [Leucine-rich repeat family protein] 0.147 0.008
5 263073_at AT2G17500 [Auxin efflux carrier family protein] 0.147 0.071
6 260921_at AT1G21540 [AMP-dependent synthetase and ligase family protein] 0.146 -0.022
7 255005_at AT4G09990 GXM2, glucuronoxylan methyltransferase 2 0.144 -0.064
8 261289_at AT1G37000 [Beta-galactosidase related protein] 0.141 -0.057
9 256025_at AT1G58370 ATXYN1, ARABIDOPSIS THALIANA XYLANASE 1, RXF12 0.129 -0.021
10 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.128 -0.095
11 261647_at AT1G27740 RSL4, root hair defective 6-like 4 0.123 -0.042
12 266263_at AT2G27570 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.120 -0.070
13 255371_at AT4G04110 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.120 -0.015
14 252160_at AT3G50570 [hydroxyproline-rich glycoprotein family protein] 0.118 -0.119
15 247879_at AT5G57770 unknown 0.118 0.009
16 252365_at AT3G48350 CEP3, cysteine endopeptidase 3 0.118 -0.008
17 253034_at AT4G38230 ATCPK26, ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26, CPK26, calcium-dependent protein kinase 26 0.116 -0.001
18 256867_at AT3G26390 unknown 0.115 0.024
19 255150_at AT4G08160 [glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein] 0.115 -0.067
20 267013_at AT2G39180 ATCRR2, CCR2, CRINKLY4 related 2 0.113 -0.153
21 250878_at AT5G04050 [RNA-directed DNA polymerase (reverse transcriptase)] 0.112 0.027
22 253174_at AT4G35090 CAT2, catalase 2 -0.499 -0.087
23 267411_at AT2G34930 [disease resistance family protein / LRR family protein] -0.334 -0.123
24 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.306 0.190
25 251743_at AT3G55890 [Yippee family putative zinc-binding protein] -0.268 0.112
26 262788_at AT1G10690 unknown -0.192 0.221
27 264766_at AT1G61420 [S-locus lectin protein kinase family protein] -0.128 0.114
28 245156_at AT5G12480 CPK7, calmodulin-domain protein kinase 7 -0.122 -0.035
29 254886_at AT4G11760 LCR17, low-molecular-weight cysteine-rich 17 -0.112 -0.064
30 247809_at AT5G58280 [AP2/B3-like transcriptional factor family protein] -0.103 -0.044
31 246321_at AT1G16640 [AP2/B3-like transcriptional factor family protein] -0.098 -0.031
32 250335_at AT5G11650 [alpha/beta-Hydrolases superfamily protein] -0.094 -0.171
33 245666_at AT1G28280 [VQ motif-containing protein] -0.090 0.073
34 246179_at AT5G28440 unknown -0.078 -0.025
35 255434_at AT4G03180 unknown -0.077 -0.029
36 257419_at AT1G30800 [Fasciclin-like arabinogalactan family protein] -0.072 -0.080
37 261070_at AT1G07390 AtRLP1, receptor like protein 1, RLP1, receptor like protein 1 -0.072 -0.037
38 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 -0.066 0.088
39 252608_at AT3G45090 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.048 0.057
40 248091_at AT5G55120 galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases -0.048 -0.134
41 258493_at AT3G02555 unknown -0.045 -0.078