4.0:Information of module
xyl-grown cell culture- 1h 1mM Suc
In comparison with ga1-3 SCL3OE help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009853 photorespiration BP 1.388e-03
GO:0043094 cellular metabolic compound salvage BP 3.066e-03
GO:0022900 electron transport chain BP 1.202e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 1.988e-25
GO:0015979 photosynthesis BP 1.939e-15
GO:0006091 generation of precursor metabolites and ... BP 4.086e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
xyl-grown cell culture- 1h 1mM Suc		 Log2 signal ratio
ga1-3 SCL3OE
1 255530_at AT4G02140 unknown 0.207 0.056
2 245165_at AT2G33180 unknown 0.193 0.118
3 250772_at AT5G05420 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] 0.192 0.025
4 256395_at AT3G06120 MUTE, MUTE 0.179 0.083
5 252083_at AT3G51960 ATBZIP24, basic leucine zipper 24, BZIP24, basic leucine zipper 24 0.154 -0.018
6 257057_at AT3G15310 unknown 0.147 0.047
7 252477_at AT3G46680 [UDP-Glycosyltransferase superfamily protein] 0.117 0.010
8 252706_at AT3G43770 [Disease resistance protein (TIR-NBS-LRR class) family] 0.110 -0.002
9 253974_at AT4G26540 [Leucine-rich repeat receptor-like protein kinase family protein] 0.105 0.086
10 255583_at AT4G01510 ARV2 0.103 -0.089
11 256339_at AT1G72080 unknown 0.101 0.005
12 252322_at AT3G48550 unknown 0.101 -0.046
13 266916_at AT2G45860 unknown 0.101 0.178
14 246209_at AT4G36870 BLH2, BEL1-like homeodomain 2, SAW1, SAWTOOTH 1 0.097 -0.084
15 248354_at AT5G52330 [TRAF-like superfamily protein] 0.095 0.014
16 249289_at AT5G41040 ASFT, aliphatic suberin feruloyl-transferase, HHT, hydroxycinnamoyl- CoA:ω-hydroxyacid O-hydroxycinnamoyltransferase, RWP1, REDUCED LEVELS OF WALL-BOUND PHENOLICS 1 0.094 0.184
17 245024_at ATCG00120 ATPA, ATP synthase subunit alpha -0.601 0.500
18 244966_at ATCG00600 PETG -0.439 -0.015
19 244983_at ATCG00790 RPL16, ribosomal protein L16 -0.365 0.245
20 244970_at ATCG00660 RPL20, ribosomal protein L20 -0.359 0.373
21 263605_at AT2G16485 NERD, Needed for RDR2-independent DNA methylation -0.322 0.267
22 244974_at ATCG00700 PSBN, photosystem II reaction center protein N -0.321 0.197
23 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.308 0.113
24 245006_at ATCG00340 PSAB -0.285 0.271
25 244981_at ATCG00770 RPS8, ribosomal protein S8 -0.285 0.213
26 245026_at ATCG00140 ATPH -0.263 0.103
27 245019_at ATCG00530 YCF10 -0.251 0.402
28 244982_at ATCG00780 RPL14, ribosomal protein L14 -0.224 0.253
29 245003_at ATCG00280 PSBC, photosystem II reaction center protein C -0.220 0.209
30 245020_at ATCG00540 PETA, photosynthetic electron transfer A -0.220 0.251
31 244998_at ATCG00180 RPOC1 -0.219 0.337