4.0:Information of module
Truncated AC2 T1
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009165 nucleotide biosynthetic process BP 1.216e-03
GO:1901293 nucleoside phosphate biosynthetic proces... BP 1.216e-03
GO:0040011 locomotion BP 1.944e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010087 phloem or xylem histogenesis BP 7.374e-03
GO:0016998 cell wall macromolecule catabolic proces... BP 8.007e-03
GO:0010305 leaf vascular tissue pattern formation BP 1.518e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Truncated AC2 T1		 Log2 signal ratio
Red/FR Light45min
1 253309_at AT4G33790 CER4, ECERIFERUM 4, FAR3, FATTY ACID REDUCTASE 3, G7 0.198 0.009
2 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 0.169 -0.004
3 246001_at AT5G20790 unknown 0.163 -0.002
4 261385_at AT1G05450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.159 0.020
5 263883_at AT2G21830 [Cysteine/Histidine-rich C1 domain family protein] 0.151 0.004
6 252580_at AT3G45490 unknown 0.150 0.015
7 262154_at AT1G52700 [alpha/beta-Hydrolases superfamily protein] 0.145 -0.050
8 247649_at AT5G60030 unknown 0.137 -0.002
9 262391_at AT1G49530 GGPS6, geranylgeranyl pyrophosphate synthase 6 0.127 -0.038
10 252871_at AT4G40000 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.125 -0.016
11 245792_at AT1G32100 ATPRR1, PRR1, pinoresinol reductase 1 0.125 -0.002
12 265854_at AT2G42370 unknown 0.124 -0.009
13 247437_at AT5G62490 ATHVA22B, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22B, HVA22 homologue B 0.118 -0.016
14 265379_at AT2G18340 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] 0.116 -0.021
15 245617_at AT4G14490 [SMAD/FHA domain-containing protein ] 0.114 0.032
16 246141_at AT5G19920 [Transducin/WD40 repeat-like superfamily protein] 0.114 0.032
17 258260_at AT3G26850 [histone-lysine N-methyltransferases] 0.110 -0.009
18 257724_at AT3G18510 unknown 0.110 -0.013
19 261967_at AT1G36440 unknown 0.106 -0.002
20 253084_at AT4G36260 SRS2, SHI RELATED SEQUENCE 2, STY2, STYLISH 2 0.105 0.016
21 251734_at AT3G56270 unknown 0.104 0.012
22 251430_at AT3G60110 [DNA-binding bromodomain-containing protein] 0.103 -0.036
23 263627_at AT2G04675 unknown 0.099 -0.008
24 245204_at AT5G12270 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.098 0.030
25 256307_at AT1G30350 [Pectin lyase-like superfamily protein] 0.098 0.001
26 256773_at AT3G13630 unknown 0.097 -0.022
27 246725_at AT5G29040 [pseudogene] 0.096 0.021
28 260388_at AT1G74070 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.095 0.014
29 265211_at AT2G36640 ATECP63, embryonic cell protein 63, ECP63, embryonic cell protein 63 0.095 0.023
30 265931_at AT2G18520 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.095 -0.004
31 255817_at AT2G33330 PDLP3, plasmodesmata-located protein 3 0.093 0.010
32 253019_at AT4G38010 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.093 0.025
33 255409_at AT4G03090 AtNDX, NDX, Nodulin Homeobox 0.090 -0.023
34 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.090 0.063
35 253153_at AT4G35700 DAZ3, DUO1-activated zinc finger 3 0.089 -0.048
36 266665_at AT2G29790 [Maternally expressed gene (MEG) family protein] 0.088 0.010
37 253658_at AT4G30120 ATHMA3, A. THALIANA HEAVY METAL ATPASE 3, HMA3, heavy metal atpase 3 0.088 -0.043
38 265667_at AT2G27470 NF-YB11, nuclear factor Y, subunit B11 0.087 0.017
39 267586_at AT2G41950 unknown 0.086 -0.036
40 266930_at AT2G45930 unknown 0.085 -0.035
41 256659_at AT3G12020 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.085 0.015
42 250283_at AT5G13270 RARE1, REQUIRED FOR ACCD RNA EDITING 1 0.085 -0.028
43 246608_at AT5G35380 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.084 0.028
44 267555_at AT2G32765 ATSUMO5, SUM5, SUMO 5, SUMO5, small ubiquitinrelated modifier 5 0.082 -0.005
45 262429_at AT1G47520 [copia-like retrotransposon family, has a 3.3e-256 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 0.082 0.011
46 261463_at AT1G07740 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.082 0.012
47 264403_at AT2G25150 [HXXXD-type acyl-transferase family protein] 0.081 0.039
48 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 -0.179 0.006
49 245568_at AT4G14650 unknown -0.167 0.031
50 265334_at AT2G18370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.163 0.026
51 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b -0.142 -0.008
52 266007_at AT2G37380 MAKR3, MEMBRANE-ASSOCIATED KINASE REGULATOR 3 -0.141 0.002
53 257398_at AT2G01990 unknown -0.141 -0.004
54 254773_at AT4G13410 ATCSLA15, CSLA15, CELLULOSE SYNTHASE LIKE A15 -0.139 -0.000
55 260962_at AT1G44980 ATPME7, A. THALIANA PECTIN METHYLESTERASE 7, PME7, pectin methylesterase 7 -0.138 0.004
56 263747_at AT2G21470 ATSAE2, SUMO-ACTIVATING ENZYME 2, EMB2764, EMBRYO DEFECTIVE 2764, SAE2, SUMO-activating enzyme 2 -0.137 0.011
57 247359_at AT5G63560 FACT, FATTY ALCOHOL:CAFFEOYL-CoA CAFFEOYL TRANSFERASE -0.135 0.007
58 265592_at AT2G20110 [Tesmin/TSO1-like CXC domain-containing protein] -0.130 -0.008
59 266912_at AT2G45900 TRM13, TON1 Recruiting Motif 13 -0.129 -0.003
60 248206_at AT5G54350 unknown -0.128 -0.019
61 248350_at AT5G52160 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.128 -0.024
62 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.127 0.006
63 259972_at AT1G76420 ANAC031, Arabidopsis NAC domain containing protein 31, CUC3, CUP SHAPED COTYLEDON3, NAC368 -0.126 -0.056
64 255371_at AT4G04110 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.121 -0.017
65 263896_at AT2G21930 [F-box associated ubiquitination effector family protein] -0.121 -0.005
66 245838_at AT1G58410 [Disease resistance protein (CC-NBS-LRR class) family] -0.121 -0.017
67 252920_at AT4G39000 AtGH9B17, glycosyl hydrolase 9B17, GH9B17, glycosyl hydrolase 9B17 -0.120 -0.009
68 246519_at AT5G15780 [Pollen Ole e 1 allergen and extensin family protein] -0.120 0.034
69 248052_at AT5G55800 [Cysteine/Histidine-rich C1 domain family protein] -0.119 -0.006
70 250450_at AT5G10280 ATMYB64, ATMYB92, myb domain protein 92, MYB92, myb domain protein 92 -0.117 0.024
71 261542_at AT1G63560 [Receptor-like protein kinase-related family protein] -0.116 0.019
72 255238_at AT4G05570 unknown -0.115 0.008
73 255695_at AT4G00080 UNE11, unfertilized embryo sac 11 -0.114 -0.091
74 266211_at AT2G06820 unknown -0.114 -0.073
75 248567_at AT5G49750 [Leucine-rich repeat (LRR) family protein] -0.110 0.017
76 261706_at AT1G32680 unknown -0.110 -0.020
77 249041_at AT5G44330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.110 -0.014
78 257480_at AT1G15640 unknown -0.110 -0.028
79 251627_at AT3G57270 BG1, beta-1,3-glucanase 1 -0.109 0.039
80 267521_at AT2G30480 unknown -0.108 -0.021
81 266374_at AT2G14640 [gypsy-like retrotransposon family, has a 2.5e-119 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] -0.108 0.030
82 265158_at AT1G31040 [PLATZ transcription factor family protein] -0.108 -0.016
83 254336_at AT4G22050 [Eukaryotic aspartyl protease family protein] -0.107 -0.014
84 256535_at AT1G33280 ANAC015, NAC domain containing protein 15, BRN1, BEARSKIN 1, NAC015, NAC domain containing protein 15 -0.104 -0.003
85 266710_at AT2G46850 [Protein kinase superfamily protein] -0.104 -0.011
86 255697_at AT4G00130 [DNA-binding storekeeper protein-related transcriptional regulator] -0.103 -0.018
87 249897_at AT5G22550 unknown -0.102 -0.022
88 253618_at AT4G30420 UMAMIT34, Usually multiple acids move in and out Transporters 34 -0.102 -0.001
89 263853_at AT2G04440 [MutT/nudix family protein] -0.102 -0.028
90 255574_at AT4G01420 CBL5, calcineurin B-like protein 5 -0.102 -0.028
91 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.102 0.030
92 245576_at AT4G14770 ATTCX2, TESMIN/TSO1-LIKE CXC 2, TCX2, TESMIN/TSO1-like CXC 2 -0.101 -0.008
93 251825_at AT3G55100 ABCG17, ATP-binding cassette G17 -0.101 -0.046