4.0:Information of module
bbx24 in Simulated Shade
In comparison with 9m.KCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.357e-05
GO:0010053 root epidermal cell differentiation BP 1.950e-05
GO:0090627 plant epidermal cell differentiation BP 2.465e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010193 response to ozone BP 4.440e-05
GO:0005984 disaccharide metabolic process BP 7.768e-04
GO:0009668 plastid membrane organization BP 7.768e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
bbx24 in Simulated Shade		 Log2 signal ratio
9m.KCl
1 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 0.335 0.005
2 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 0.279 -0.230
3 259064_at AT3G07490 AGD11, ARF-GAP domain 11, AtCML3, CML3, calmodulin-like 3 0.251 -0.281
4 246993_at AT5G67450 AZF1, zinc-finger protein 1, ZF1, zinc-finger protein 1 0.239 -0.075
5 250778_at AT5G05500 MOP10 0.202 -0.177
6 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] 0.195 -0.107
7 259964_at AT1G53680 ATGSTU28, glutathione S-transferase TAU 28, GSTU28, glutathione S-transferase TAU 28 0.194 -0.104
8 258362_at AT3G14280 unknown 0.194 -0.023
9 253931_at AT4G26770 [Phosphatidate cytidylyltransferase family protein] 0.191 -0.134
10 264415_at AT1G43160 RAP2.6, related to AP2 6 0.175 -0.384
11 258178_at AT3G21680 unknown 0.174 -0.025
12 263614_at AT2G25240 AtCCP3, CCP3, conserved in ciliated species and in the land plants 3 0.172 -0.188
13 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.170 -0.140
14 252187_at AT3G50850 [Putative methyltransferase family protein] 0.169 -0.084
15 264551_at AT1G09460 [Carbohydrate-binding X8 domain superfamily protein] 0.151 0.063
16 256913_at AT3G23870 unknown 0.149 -0.085
17 254467_at AT4G20450 [Leucine-rich repeat protein kinase family protein] 0.144 -0.257
18 254173_at AT4G24580 REN1, ROP1 ENHANCER 1 0.136 0.012
19 248203_at AT5G54230 AtMYB49, myb domain protein 49, MYB49, myb domain protein 49 0.133 -0.135
20 247581_at AT5G61350 [Protein kinase superfamily protein] 0.131 -0.116
21 260558_at AT2G43600 [Chitinase family protein] 0.131 -0.017
22 259291_at AT3G11550 CASP2, Casparian strip membrane domain protein 2 0.130 -0.029
23 263546_at AT2G21550 [Bifunctional dihydrofolate reductase/thymidylate synthase] 0.122 -0.008
24 251107_at AT5G01610 unknown 0.121 -0.060
25 261647_at AT1G27740 RSL4, root hair defective 6-like 4 0.121 -0.144
26 260956_at AT1G06040 BBX24, B-box domain protein 24, STO, SALT TOLERANCE -0.827 0.010
27 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 -0.222 0.102
28 245449_at AT4G16870 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.202 0.006
29 247718_at AT5G59310 LTP4, lipid transfer protein 4 -0.199 -0.002
30 251005_at AT5G02590 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.156 0.013
31 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] -0.111 0.207
32 250174_at AT5G14380 AGP6, arabinogalactan protein 6 -0.100 0.010
33 261936_at AT1G22600 [Late embryogenesis abundant protein (LEA) family protein] -0.098 0.001
34 266677_at AT2G29820 [Galactose oxidase/kelch repeat superfamily protein] -0.096 0.032
35 255034_at AT4G09540 [copia-like retrotransposon family, has a 1.7e-43 P-value blast match to GB:AAC64917 gag-pol polyprotein (Ty1_Copia-element) (Glycine max)] -0.091 -0.012
36 258318_at AT3G22680 RDM1, RNA-DIRECTED DNA METHYLATION 1 -0.087 -0.020
37 246274_at AT4G36620 GATA19, GATA transcription factor 19, HANL2, hanaba taranu like 2 -0.086 -0.045
38 250014_at AT5G17990 pat1, PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1, TRP1, tryptophan biosynthesis 1 -0.083 0.113
39 264360_at AT1G03310 AtBE2, ATISA2, ARABIDOPSIS THALIANA ISOAMYLASE 2, BE2, BRANCHING ENZYME 2, DBE1, debranching enzyme 1, ISA2 -0.083 0.001
40 246897_at AT5G25560 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.080 0.059
41 253869_at AT4G27510 unknown -0.069 -0.038
42 258996_at AT3G01800 [Ribosome recycling factor] -0.069 0.017
43 261737_at AT1G47885 [Ribonuclease inhibitor] -0.069 -0.014
44 262653_at AT1G14130 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.068 0.104
45 256969_at AT3G21080 [ABC transporter-related] -0.068 0.032
46 253544_at AT4G31280 unknown -0.068 -0.009
47 264737_at AT1G62210 unknown -0.066 0.004
48 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 -0.065 -0.022
49 260021_at AT1G30010 nMAT1, nuclear maturase 1 -0.065 -0.002
50 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.065 0.042