4.0:Analysis result:Information of module
| rdr6-11 ein5-1 ski2-3 |
Top 100 most enriched GO terms
| GOID/Term | Ontology | p-value | Genes |
|---|---|---|---|
| GO:0006354 DNA-templated transcription, elongation | BP | 6.599e-26 | AT2G18400 ADK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0015979 photosynthesis | BP | 2.020e-25 | PSAD-2 OE23 PSAO GAPA-2 CP24 AB180 AB140 RBCS1A LHCB4.3 PSRP2 FAD6 PDE334 LHCB4.1 RBCS3B NdhN PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSBJ PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0019684 photosynthesis, light reaction | BP | 1.249e-23 | PSAD-2 OE23 PSAO GAPA-2 CP24 AB180 AB140 LHCB4.3 PSRP2 FAD6 PDE334 LHCB4.1 NdhN PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE PETA PSAJ PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0006091 generation of precursor metabolites and ... | BP | 8.296e-20 | PSAD-2 OE23 PSAO GAPA-2 CP24 AB180 AB140 ACO2 LHCB4.3 ATPMM PSRP2 FAD6 PDE334 LHCB4.1 NdhN PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0098542 defense response to other organism | BP | 1.294e-11 | ACO4 OE23 PGDH ATCLH1 AIN1 AT1G74640 AT2G04400 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. FMA CYP71B15 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 NdhN ATPA ATPB NDHA |
| GO:0009765 photosynthesis, light harvesting | BP | 6.678e-11 | PSAO CP24 AB180 AB140 LHCB4.3 LHCB4.1 PSBI PSBD PSAB PSBH |
| GO:0050832 defense response to fungus | BP | 7.829e-11 | ACO4 OE23 ATCLH1 CYP71A13 HEL ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. CYP71B15 ATPCA TRP3 ATGSTF2 AT4G16260 PDE334 ATH3 NdhN ATPB |
| GO:0006952 defense response | BP | 1.364e-10 | ACO4 OE23 PGDH ATCLH1 AT1G23130 AIN1 AT1G63750 MLP28 AT1G74640 AT2G04400 PDF1.3 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. FMA AT3G26450 CYP71B15 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 ATNADP-ME2 AtTGG1 AT5G38850 ATH3 AT5G43740 LCR77 PDF1.2c ATERF-2 AT5G47260 NdhN ATPA ATPB NDHA |
| GO:0044237 cellular metabolic process | BP | 1.616e-10 | PSAD-2 AT1G04800 ACO4 OE23 PSAO GAPA-2 APK2A DECOY CP24 ATCCR1 PGDH CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AB180 AB140 AtTRM9 ARF20 RGE1 AT1G54220 AIN1 GES ACO2 RPF3 AtLIG6 RBCS1A AT1G68260 AT1G74640 ATLUP1 EMB1047 AT1G80640 XERICO AT2G04400 AT2G13720 AT2G13960 AT2G18400 CYCB1;4 ARR13 AT103-1A CYP71A13 NF-YA4 GTE01 AT2G35795 AT2G37240 ADK NATA1 LHCB4.3 ATCKX1 AT2G43590 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP AAE7 RFC3 ATCAD4 CYCP2;1 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AtXTH31 AT3G49070 ATPCA RDR6 PSRP2 CP33 TRP3 PSRP5 EDA33 ATGSTF2 AT4G08990 IAGLU AT4G23670 AT4G24350 ATFSD1 AT4G27300 AT4G29090 FAD6 PDE334 PLAT1 LHCB4.1 ARR21 TPPI ATNADP-ME2 SSP5 AT5G12090 GASA4 AT5G16240 AT5G23650 AtTGG1 RBCS3B Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 ATERF-2 AT5G47260 EMB2812 CPI1 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSBJ PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0006955 immune response | BP | 1.956e-10 | ACO4 OE23 PGDH ATCLH1 AIN1 AT1G74640 AT2G04400 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 FMA CYP71B15 ATPCA RDR6 TRP3 AT4G16260 PDE334 ATNADP-ME2 LCR77 ATERF-2 NdhN ATPB |
| GO:0045087 innate immune response | BP | 1.956e-10 | ACO4 OE23 PGDH ATCLH1 AIN1 AT1G74640 AT2G04400 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 FMA CYP71B15 ATPCA RDR6 TRP3 AT4G16260 PDE334 ATNADP-ME2 LCR77 ATERF-2 NdhN ATPB |
| GO:0009607 response to biotic stimulus | BP | 7.840e-10 | ACO4 OE23 PGDH ATCLH1 AIN1 GES AT1G74640 AT2G04400 CYP71A13 SIB2 HEL AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP FMA CYP71B15 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 NdhN ATPA ATPB NDHA |
| GO:0043207 response to external biotic stimulus | BP | 7.840e-10 | ACO4 OE23 PGDH ATCLH1 AIN1 GES AT1G74640 AT2G04400 CYP71A13 SIB2 HEL AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP FMA CYP71B15 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 NdhN ATPA ATPB NDHA |
| GO:0051707 response to other organism | BP | 7.840e-10 | ACO4 OE23 PGDH ATCLH1 AIN1 GES AT1G74640 AT2G04400 CYP71A13 SIB2 HEL AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP FMA CYP71B15 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 NdhN ATPA ATPB NDHA |
| GO:0050896 response to stimulus | BP | 2.355e-09 | ACO4 OE23 PRIN2 AT1G11270 CP24 ATCCR1 PGDH ATCLH1 DRT112 AT1G23130 KDR ARF20 AT1G54220 AIN1 GES ACO2 AT1G63750 AtLIG6 RBCS1A AT-EXP1 MLP28 AtCPB AT1G74640 GASA6 ATEXT1 XERICO AT2G04400 AT2G21340 PDF1.3 ARR13 AT103-1A CYP71A13 ATGRP23 NF-YA4 AT2G38380 NATA1 LHCB4.3 AT2G41090 SIB2 ATPMM ATMPK12 HEL AT3G09250 AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. AT3G16670 ATEBP ATCAD4 AT3G23550 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 ATPCA RDR6 DIN11 TRP3 AT3G54800 ATGSTF2 AT4G02940 AT4G16260 AT4G23670 AT4G24350 ATFSD1 FAD6 PDE334 AT4G32530 PLAT1 LHCB4.1 ARR21 ATNADP-ME2 GASA4 DGR2 AtTGG1 RBCS3B RBCS1B AT5G38850 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 AT5G43740 LCR77 PDF1.2c ATERF-2 AT5G47260 CPI1 DYAD PDC2 ATOXS3 NdhN Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. CLEL AGL31 RLK ATPA NDHJ ATPB RBCL PETB NDHA |
| GO:0002376 immune system process | BP | 2.911e-09 | ACO4 OE23 PGDH ATCLH1 AIN1 AT1G74640 AT2G04400 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 FMA CYP71B15 ATPCA RDR6 TRP3 AT4G16260 PDE334 ATNADP-ME2 LCR77 ATERF-2 NdhN ATPB |
| GO:0009628 response to abiotic stimulus | BP | 3.855e-09 | OE23 PRIN2 AT1G11270 CP24 ATCCR1 DRT112 KDR AIN1 GES ACO2 RBCS1A AT-EXP1 AtCPB GASA6 XERICO NF-YA4 AT2G38380 LHCB4.3 AT2G41090 ATPMM HEL AT3G09440 ATEBP ATCAD4 AOC2 AT3G26450 CYP71B15 ATPCA DIN11 TRP3 ATGSTF2 AT4G02940 AT4G16260 AT4G23670 ATFSD1 FAD6 PDE334 AT4G32530 LHCB4.1 ATNADP-ME2 DGR2 RBCS3B RBCS1B ATH3 CPI1 PDC2 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. CLEL AGL31 ATPA ATPB |
| GO:0006950 response to stress | BP | 4.788e-09 | ACO4 OE23 AT1G11270 CP24 ATCCR1 PGDH ATCLH1 AT1G23130 AIN1 GES ACO2 AT1G63750 AtLIG6 RBCS1A MLP28 AtCPB AT1G74640 ATEXT1 XERICO AT2G04400 PDF1.3 AT103-1A CYP71A13 NF-YA4 AT2G38380 SIB2 ATPMM HEL AT3G09250 AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. AT3G16670 ATEBP FMA AOC2 AT3G26450 CYP71B15 ATPCA RDR6 DIN11 TRP3 ATGSTF2 AT4G16260 AT4G23670 AT4G24350 ATFSD1 PDE334 AT4G32530 PLAT1 ATNADP-ME2 AtTGG1 AT5G38850 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 AT5G43740 LCR77 PDF1.2c ATERF-2 AT5G47260 PDC2 ATOXS3 NdhN AGL31 ATPA NDHJ ATPB NDHA |
| GO:0009620 response to fungus | BP | 5.358e-09 | ACO4 OE23 ATCLH1 GES CYP71A13 HEL ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. CYP71B15 ATPCA TRP3 ATGSTF2 AT4G16260 PDE334 ATH3 NdhN ATPB |
| GO:0010207 photosystem II assembly | BP | 5.733e-09 | OE23 PSAO GAPA-2 PDE334 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH NDHA |
| GO:0009753 response to jasmonic acid | BP | 1.121e-08 | ACO4 OE23 ATCLH1 GES AT1G74640 ATEXT1 AT103-1A CYP71A13 NF-YA4 NATA1 ATEBP FMA CYP71B15 TRP3 PDE334 LCR77 ATERF-2 |
| GO:0070271 protein complex biogenesis | BP | 1.149e-08 | OE23 PSAO GAPA-2 HTA10 AIN1 RBCS1A AtCPB PDE334 ATNADP-ME2 RBCS3B ATH3 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0009814 defense response, incompatible interacti... | BP | 1.609e-08 | ACO4 OE23 ATCLH1 AT1G74640 AT2G04400 CYP71A13 SIB2 HEL ATHCHIB AT3G15356 FMA CYP71B15 TRP3 AT4G16260 PDE334 LCR77 NdhN ATPB |
| GO:0009617 response to bacterium | BP | 2.720e-08 | ACO4 OE23 PGDH ATCLH1 GES AT1G74640 AT2G04400 CYP71A13 HEL FMA CYP71B15 ATPCA TRP3 ATGSTF2 AT4G23670 PDE334 ATERF-2 ATPA NDHA |
| GO:0009767 photosynthetic electron transport chain | BP | 3.280e-08 | OE23 GAPA-2 PSRP2 FAD6 PSBA PSBD PSBC PETA PSBB PETB NDHA |
| GO:0071704 organic substance metabolic process | BP | 3.431e-08 | PSAD-2 AT1G04800 ACO4 OE23 PSAO PRIN2 GAPA-2 APK2A DECOY CP24 ATCCR1 PGDH CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AtTRM9 ARF20 RGE1 AT1G54010 AT1G54220 AIN1 GES ACO2 RPF3 AtLIG6 RBCS1A AT1G68260 AT1G74640 ATLUP1 EMB1047 AT1G80640 AT2G03310 XERICO AT2G04400 AT2G13720 AT2G13960 AT2G18400 CYCB1;4 ARR13 AT103-1A CYP71A13 NF-YA4 GTE01 AT2G35795 AT2G37240 ADK NATA1 LHCB4.3 ATCKX1 AT2G43590 AtGH9B9 AtGH9B11 AtGH9B12 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP AAE7 RFC3 ATCAD4 CYCP2;1 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AtXTH31 AT3G49070 RDR6 PSRP2 CP33 TRP3 PSRP5 EDA33 AT4G08990 IAGLU AT4G16640 AT4G23670 AT4G24350 AT4G27300 AT4G29090 FAD6 PDE334 PLAT1 LHCB4.1 ARR21 TPPI ATNADP-ME2 SSP5 AT5G12090 GASA4 AT5G16240 AT5G23650 AtTGG1 RBCS3B RBCS1B Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). AT5G42930 ATH3 ATERF-2 AT5G47260 EMB2812 CPI1 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0042742 defense response to bacterium | BP | 3.725e-08 | ACO4 OE23 PGDH ATCLH1 AT2G04400 CYP71A13 HEL CYP71B15 ATPCA TRP3 ATGSTF2 AT4G23670 PDE334 ATERF-2 ATPA NDHA |
| GO:0022900 electron transport chain | BP | 4.081e-08 | OE23 GAPA-2 PSRP2 FAD6 PSBA PSBD PSBC PETA PSBB PETB NDHD NDHE NDHA |
| GO:0009987 cellular process | BP | 5.612e-08 | PSAD-2 AT1G04800 ACO4 OE23 PSAO GAPA-2 APK2A DECOY CP24 ATCCR1 PGDH CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AB180 AB140 AtTRM9 ARF20 RGE1 HTA10 AT1G54220 AIN1 GES ACO2 RPF3 AT1G63750 AT1G65550 ATSUC7 AtLIG6 RBCS1A AT1G68260 AT-EXP1 AtCPB AT1G74640 GASA6 ATLUP1 EMB1047 AT1G80640 XERICO AT2G04400 AT2G13720 AT2G13960 ATSUC8 AT2G18400 AT2G21340 CYCB1;4 ARR13 ATEXO70H5 AT103-1A CYP71A13 NF-YA4 GTE01 AT2G35795 AT2G37240 ADK NATA1 LHCB4.3 ATEXP8 AT2G41090 ATCKX1 AT2G43150 AT2G43590 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP AAE7 RFC3 ATCAD4 CYCP2;1 AT3G23550 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 AT3G28780 HIRA AtXTH31 AT3G49070 ATPCA RDR6 DIN11 PSRP2 CP33 TRP3 AT3G54800 PSRP5 EDA33 ATGSTF2 AT4G08990 IAGLU AT4G23670 AT4G24350 ATFSD1 AT4G27300 AT4G29090 FAD6 PDE334 AT4G32530 PLAT1 LHCB4.1 ATSUC9 ARR21 TPPI ATNADP-ME2 SSP5 AT5G12090 GASA4 AT5G16240 AT5G23650 AtENODL13 AT5G25420 AtTGG1 RBCS3B AT5G38850 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 ATERF-2 AT5G47260 EMB2812 CPI1 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. CLEL AGL31 AT5G65860 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSBJ PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA YCF1.2 |
| GO:0009605 response to external stimulus | BP | 6.752e-08 | ACO4 OE23 PGDH ATCLH1 DRT112 AIN1 GES AT1G74640 AT2G04400 CYP71A13 AT2G41090 SIB2 HEL AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP FMA CYP71B15 ATPCA RDR6 DIN11 TRP3 ATGSTF2 AT4G16260 AT4G23670 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 CPI1 NdhN CLEL ATPA NDHJ ATPB NDHA |
| GO:0009725 response to hormone | BP | 8.689e-08 | ACO4 OE23 ATCLH1 ARF20 AIN1 GES ACO2 AT-EXP1 AT1G74640 GASA6 ATEXT1 XERICO ARR13 AT103-1A CYP71A13 ATGRP23 NF-YA4 NATA1 ATMPK12 HEL ATHCHIB ATEBP AT3G23550 FMA CYP71B15 DIN11 TRP3 PDE334 ARR21 GASA4 AtTGG1 ATH3 LCR77 ATERF-2 RBCL |
| GO:0080134 regulation of response to stress | BP | 1.233e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 SIB2 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 AGL31 |
| GO:0009719 response to endogenous stimulus | BP | 1.396e-07 | ACO4 OE23 ATCLH1 ARF20 AIN1 GES ACO2 AT-EXP1 AT1G74640 GASA6 ATEXT1 XERICO ARR13 AT103-1A CYP71A13 ATGRP23 NF-YA4 NATA1 ATMPK12 HEL ATHCHIB Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP AT3G23550 FMA CYP71B15 DIN11 TRP3 PDE334 ARR21 GASA4 AtTGG1 ATH3 LCR77 ATERF-2 RBCL |
| GO:0006461 protein complex assembly | BP | 1.720e-07 | OE23 PSAO GAPA-2 HTA10 AIN1 AtCPB PDE334 ATNADP-ME2 ATH3 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0044272 sulfur compound biosynthetic process | BP | 2.226e-07 | OE23 PSAO CP24 DRT112 AT1G54220 ACO2 AT1G68260 CYP71A13 AT3G26450 CYP71B15 ATMDAR4 AT4G23670 FAD6 PDE334 GASA4 NDHD NDHE |
| GO:0002682 regulation of immune system process | BP | 2.245e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 |
| GO:0045088 regulation of innate immune response | BP | 2.245e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 |
| GO:0050776 regulation of immune response | BP | 2.245e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 |
| GO:0065003 macromolecular complex assembly | BP | 2.691e-07 | OE23 PSAO GAPA-2 HTA10 AIN1 AtCPB PDE334 ATNADP-ME2 ATH3 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0044085 cellular component biogenesis | BP | 3.430e-07 | OE23 PSAO GAPA-2 AT1G29070 HTA10 AIN1 RBCS1A AtCPB LHCB4.3 AT2G45720 RFC3 AT3G28780 AtXTH31 CP33 PDE334 LHCB4.1 ATNADP-ME2 RBCS3B ATH3 CPI1 NdhN Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. PSBA PSBK PSBI ATPA PSBD PSBC NDHJ PETA PSBB PSBN PSBH PETB YCF5 NDHA |
| GO:0031347 regulation of defense response | BP | 3.631e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 SIB2 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 |
| GO:0006790 sulfur compound metabolic process | BP | 5.025e-07 | OE23 PSAO CP24 DRT112 AT1G54220 ACO2 AT1G68260 CYP71A13 AT3G26450 CYP71B15 ATMDAR4 AT4G23670 FAD6 PDE334 GASA4 AtTGG1 CPI1 NDHD NDHE |
| GO:0010363 regulation of plant-type hypersensitive ... | BP | 5.615e-07 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0071822 protein complex subunit organization | BP | 7.498e-07 | OE23 PSAO GAPA-2 HTA10 AIN1 AtCPB PDE334 ATNADP-ME2 ATH3 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0043623 cellular protein complex assembly | BP | 7.705e-07 | OE23 PSAO GAPA-2 AIN1 AtCPB PDE334 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0009626 plant-type hypersensitive response | BP | 1.008e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0034050 host programmed cell death induced by sy... | BP | 1.008e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0044260 cellular macromolecule metabolic process | BP | 1.092e-06 | PSAD-2 AT1G04800 OE23 PSAO GAPA-2 APK2A DECOY CP24 CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AtTRM9 ARF20 RGE1 AIN1 RPF3 AtLIG6 AT1G74640 EMB1047 AT1G80640 AT2G13720 AT2G13960 AT2G18400 CYCB1;4 ARR13 NF-YA4 GTE01 AT2G35795 ADK LHCB4.3 ATCKX1 AT2G43590 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP RFC3 CYCP2;1 FMA RPL12 HIRA AtXTH31 AT3G49070 RDR6 PSRP5 EDA33 AT4G08990 AT4G27300 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 SSP5 AT5G12090 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 ATERF-2 AT5G47260 EMB2812 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AGL31 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0080135 regulation of cellular response to stres... | BP | 1.159e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0006612 protein targeting to membrane | BP | 1.330e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0043067 regulation of programmed cell death | BP | 1.330e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0043436 oxoacid metabolic process | BP | 1.349e-06 | ACO4 OE23 PSAO GAPA-2 CP24 PGDH DRT112 Cpn60beta4 AT1G54220 GES ACO2 AT1G68260 XERICO AT2G04400 AT103-1A CYP71A13 ADK NATA1 ATPMM AAE7 RFC3 AOC2 AT3G26450 CYP71B15 ATMDAR4 PSRP2 CP33 TRP3 IAGLU AT4G23670 FAD6 PDE334 PLAT1 ATNADP-ME2 GASA4 AT5G16240 AtTGG1 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. RPS14 NDHD NDHE |
| GO:0006082 organic acid metabolic process | BP | 1.393e-06 | ACO4 OE23 PSAO GAPA-2 CP24 PGDH DRT112 Cpn60beta4 AT1G54220 GES ACO2 AT1G68260 XERICO AT2G04400 AT103-1A CYP71A13 ADK NATA1 ATPMM AAE7 RFC3 AOC2 AT3G26450 CYP71B15 ATMDAR4 PSRP2 CP33 TRP3 IAGLU AT4G23670 FAD6 PDE334 PLAT1 ATNADP-ME2 GASA4 AT5G16240 AtTGG1 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. RPS14 NDHD NDHE |
| GO:0044281 small molecule metabolic process | BP | 1.582e-06 | ACO4 OE23 PSAO GAPA-2 CP24 PGDH DRT112 Cpn60beta4 AT1G54220 GES ACO2 AT1G68260 ATLUP1 XERICO AT2G04400 AT103-1A CYP71A13 NF-YA4 AT2G37240 ADK NATA1 ATPMM AAE7 RFC3 AOC2 AT3G26450 CYP71B15 ATMDAR4 PSRP2 CP33 TRP3 IAGLU AT4G23670 AT4G24350 FAD6 PDE334 PLAT1 ATNADP-ME2 GASA4 AT5G16240 AtTGG1 ATH3 CPI1 NdhN Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G65860 ATPA ATPF RPS14 ATPE ATPB NDHD NDHE |
| GO:0034622 cellular macromolecular complex assembly | BP | 1.649e-06 | OE23 PSAO GAPA-2 HTA10 AIN1 AtCPB PDE334 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0009867 jasmonic acid mediated signaling pathway | BP | 1.740e-06 | ACO4 OE23 ATCLH1 GES AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATERF-2 |
| GO:0071395 cellular response to jasmonic acid stimu... | BP | 1.740e-06 | ACO4 OE23 ATCLH1 GES AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATERF-2 |
| GO:0046686 response to cadmium ion | BP | 1.785e-06 | DRT112 AT1G54220 ACO2 NF-YA4 ATPMM AT3G09440 ATHCHIB ATMDAR4 ATGSTF2 AT4G23670 ATFSD1 AT4G32530 ATNADP-ME2 ATOXS3 RBCL |
| GO:0035304 regulation of protein dephosphorylation | BP | 1.791e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 FMA FAD6 PDE334 |
| GO:1901576 organic substance biosynthetic process | BP | 1.853e-06 | AT1G04800 ACO4 OE23 PSAO CP24 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AT1G29070 ARF20 RGE1 AT1G54220 AIN1 GES ACO2 AtLIG6 AT1G68260 AT1G74640 ATLUP1 AT2G03310 AT2G04400 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 AT2G37240 ADK ATCKX1 AT2G45720 ATPMM ATWRKY43 ATEBP RFC3 ATCAD4 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AT3G49070 PSRP2 CP33 TRP3 PSRP5 EDA33 AT4G23670 AT4G29090 FAD6 PDE334 PLAT1 ARR21 TPPI ATNADP-ME2 GASA4 AT5G16240 AT5G23650 ATERF-2 AT5G47260 EMB2812 CPI1 PDC2 NdhN Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0010941 regulation of cell death | BP | 1.984e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0006807 nitrogen compound metabolic process | BP | 2.518e-06 | OE23 PSAO GAPA-2 CP24 PGDH ATCLH1 DRT112 Cpn60beta4 AtTRM9 ARF20 RGE1 AIN1 ACO2 RPF3 AtLIG6 AT1G68260 AT1G74640 AT2G04400 AT2G13720 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 ADK NATA1 LHCB4.3 ATCKX1 ATWRKY43 AT3G09250 ATEBP FMA AT3G26450 CYP71B15 HIRA RDR6 TRP3 EDA33 AT4G08990 IAGLU AT4G23670 AT4G24350 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 GASA4 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATERF-2 EMB2812 DYAD NdhN AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0035303 regulation of dephosphorylation | BP | 2.544e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 FMA FAD6 PDE334 |
| GO:0031399 regulation of protein modification proce... | BP | 2.905e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 CYCB1;4 CYCP2;1 FMA FAD6 PDE334 |
| GO:0019220 regulation of phosphate metabolic proces... | BP | 3.286e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 CYCB1;4 CYCP2;1 FMA FAD6 PDE334 |
| GO:0051174 regulation of phosphorus metabolic proce... | BP | 3.286e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 CYCB1;4 CYCP2;1 FMA FAD6 PDE334 |
| GO:0072657 protein localization to membrane | BP | 3.286e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0090150 establishment of protein localization to... | BP | 3.286e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0009069 serine family amino acid metabolic proce... | BP | 3.496e-06 | OE23 PSAO CP24 PGDH DRT112 ACO2 AT1G68260 AT3G26450 AT4G23670 FAD6 GASA4 NDHE |
| GO:0010243 response to organonitrogen compound | BP | 3.709e-06 | ACO4 OE23 AIN1 XERICO CYP71A13 ATMPK12 Lectin like protein whose expression is induced upon treatment with chitin oligomers. CYP71B15 TRP3 PDE334 ATERF-2 |
| GO:0009755 hormone-mediated signaling pathway | BP | 3.793e-06 | ACO4 OE23 ATCLH1 AIN1 GES AT1G74640 GASA6 ARR13 CYP71A13 ATHCHIB ATEBP FMA CYP71B15 TRP3 PDE334 ARR21 GASA4 ATH3 ATERF-2 |
| GO:0044763 single-organism cellular process | BP | 3.906e-06 | PSAD-2 ACO4 OE23 PSAO GAPA-2 DECOY CP24 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AT1G54220 AIN1 GES ACO2 AT1G63750 AT1G65550 ATSUC7 AtLIG6 AT1G68260 AT-EXP1 AtCPB AT1G74640 GASA6 ATLUP1 XERICO AT2G04400 ATSUC8 AT2G21340 CYCB1;4 ARR13 ATEXO70H5 AT103-1A CYP71A13 NF-YA4 GTE01 AT2G37240 ADK NATA1 ATEXP8 AT2G41090 AT2G45720 ATPMM ATMPK12 AT3G09250 ATHCHIB ATEBP AAE7 RFC3 ATCAD4 CYCP2;1 AT3G23550 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 AT3G28780 ATPCA RDR6 DIN11 PSRP2 CP33 TRP3 AT3G54800 PSRP5 EDA33 ATGSTF2 IAGLU AT4G23670 AT4G24350 ATFSD1 AT4G27300 FAD6 PDE334 AT4G32530 PLAT1 ATSUC9 ARR21 TPPI ATNADP-ME2 GASA4 AT5G16240 AtENODL13 AT5G25420 AtTGG1 AT5G38850 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 ATERF-2 EMB2812 CPI1 DYAD NdhN Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. CLEL AT5G65860 RLK PSBA ATPA ATPF PSBD PSBC RPS14 NDHJ PSBG ATPE ATPB PETA PSBB PETB YCF5 NDHD NDHE NDHA YCF1.2 |
| GO:0072593 reactive oxygen species metabolic proces... | BP | 4.048e-06 | ACO4 OE23 ATCLH1 DRT112 AT1G74640 CYP71A13 FMA CYP71B15 ATMDAR4 ATPCA TRP3 ATFSD1 PDE334 |
| GO:0006725 cellular aromatic compound metabolic pro... | BP | 4.193e-06 | ACO4 OE23 PSAO GAPA-2 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AtTRM9 ARF20 RGE1 AIN1 ACO2 RPF3 AtLIG6 AT1G74640 AT2G04400 AT2G13720 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 ADK LHCB4.3 ATCKX1 ATWRKY43 AT3G09250 ATEBP ATCAD4 FMA CYP71B15 HIRA RDR6 TRP3 EDA33 AT4G08990 IAGLU AT4G24350 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATERF-2 EMB2812 DYAD NdhN AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0009723 response to ethylene | BP | 4.887e-06 | AIN1 GES ACO2 CYP71A13 NF-YA4 HEL ATHCHIB ATEBP AT3G23550 CYP71B15 DIN11 LCR77 ATERF-2 |
| GO:0010310 regulation of hydrogen peroxide metaboli... | BP | 4.896e-06 | ACO4 OE23 ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 |
| GO:0071840 cellular component organization or bioge... | BP | 4.991e-06 | ACO4 OE23 PSAO GAPA-2 DECOY CP24 PGDH ATCLH1 DRT112 AT1G29070 HTA10 AIN1 ACO2 RBCS1A AT-EXP1 AtCPB AT1G74640 EMB1047 AT2G13720 CYP71A13 LHCB4.3 ATEXP8 AT2G43150 AT2G45720 ATPMM RFC3 FMA CYP71B15 AT3G28780 AtXTH31 ATPCA CP33 TRP3 PSRP5 EDA33 PDE334 AT4G32530 LHCB4.1 ATNADP-ME2 AtENODL13 RBCS3B ATH3 CPI1 DYAD PDC2 NdhN Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. PSBA PSBK PSBI ATPA PSBD PSBC NDHJ PETA PSBB PSBN PSBH PETB YCF5 NDHA |
| GO:0000165 MAPK cascade | BP | 5.715e-06 | ACO4 OE23 ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 |
| GO:0023014 signal transduction by phosphorylation | BP | 5.715e-06 | ACO4 OE23 ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 |
| GO:0001101 response to acid chemical | BP | 6.049e-06 | ACO4 OE23 ATCLH1 AIN1 GES ACO2 AT-EXP1 AT1G74640 GASA6 ATEXT1 XERICO AT103-1A CYP71A13 ATGRP23 NF-YA4 NATA1 ATMPK12 HEL ATHCHIB ATEBP FMA CYP71B15 TRP3 ATFSD1 PDE334 GASA4 AtTGG1 LCR77 ATERF-2 RBCL |
| GO:0022607 cellular component assembly | BP | 7.080e-06 | OE23 PSAO GAPA-2 HTA10 AIN1 AtCPB AT3G28780 CP33 PDE334 ATNADP-ME2 ATH3 CPI1 NdhN PSBA PSBK PSBI PSBD PSBC NDHJ PETA PSBB PSBN PSBH YCF5 NDHA |
| GO:0006470 protein dephosphorylation | BP | 7.625e-06 | PSAD-2 PSAO GAPA-2 CP24 ATCLH1 AT1G74640 FMA FAD6 PDE334 SSP5 |
| GO:0043170 macromolecule metabolic process | BP | 7.808e-06 | PSAD-2 AT1G04800 OE23 PSAO PRIN2 GAPA-2 APK2A DECOY CP24 CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AtTRM9 ARF20 RGE1 AIN1 RPF3 AtLIG6 AT1G74640 EMB1047 AT1G80640 AT2G13720 AT2G13960 AT2G18400 CYCB1;4 ARR13 NF-YA4 GTE01 AT2G35795 ADK LHCB4.3 ATCKX1 AT2G43590 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP RFC3 CYCP2;1 FMA RPL12 HIRA AtXTH31 AT3G49070 RDR6 PSRP5 EDA33 AT4G08990 AT4G16640 AT4G27300 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 SSP5 AT5G12090 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATH3 ATERF-2 AT5G47260 EMB2812 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AGL31 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0009058 biosynthetic process | BP | 8.492e-06 | AT1G04800 ACO4 OE23 PSAO CP24 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AT1G29070 ARF20 RGE1 AT1G54220 AIN1 GES ACO2 AtLIG6 AT1G68260 AT1G74640 ATLUP1 AT2G03310 AT2G04400 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 AT2G37240 ADK ATCKX1 AT2G45720 ATPMM ATWRKY43 ATEBP RFC3 ATCAD4 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AT3G49070 PSRP2 CP33 TRP3 PSRP5 EDA33 AT4G23670 AT4G29090 FAD6 PDE334 PLAT1 ARR21 TPPI ATNADP-ME2 GASA4 AT5G16240 AT5G23650 ATERF-2 AT5G47260 EMB2812 CPI1 PDC2 NdhN Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0019752 carboxylic acid metabolic process | BP | 8.727e-06 | ACO4 OE23 PSAO GAPA-2 CP24 PGDH DRT112 Cpn60beta4 AT1G54220 GES ACO2 AT1G68260 XERICO AT2G04400 AT103-1A CYP71A13 ADK NATA1 ATPMM AAE7 RFC3 AOC2 AT3G26450 CYP71B15 PSRP2 CP33 TRP3 IAGLU AT4G23670 FAD6 PDE334 PLAT1 ATNADP-ME2 GASA4 AT5G16240 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. RPS14 NDHE |
| GO:0048583 regulation of response to stimulus | BP | 8.806e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 SIB2 FMA CYP71B15 ATPCA TRP3 PDE334 ATNADP-ME2 ATERF-2 AGL31 |
| GO:2000377 regulation of reactive oxygen species me... | BP | 8.910e-06 | ACO4 OE23 ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 |
| GO:0012501 programmed cell death | BP | 9.203e-06 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0044249 cellular biosynthetic process | BP | 1.042e-05 | AT1G04800 ACO4 OE23 PSAO CP24 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AT1G29070 ARF20 RGE1 AT1G54220 AIN1 GES ACO2 AtLIG6 AT1G68260 AT1G74640 ATLUP1 AT2G04400 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 ADK ATCKX1 AT2G45720 ATPMM ATWRKY43 ATEBP RFC3 ATCAD4 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AT3G49070 PSRP2 CP33 TRP3 PSRP5 EDA33 AT4G23670 AT4G29090 FAD6 PDE334 PLAT1 ARR21 TPPI GASA4 AT5G16240 AT5G23650 ATERF-2 AT5G47260 EMB2812 NdhN Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0051704 multi-organism process | BP | 1.061e-05 | ACO4 OE23 PGDH ATCLH1 AIN1 GES AT1G74640 AT2G04400 CYP71A13 GTE01 SIB2 HEL AT3G09440 ATHCHIB AT3G15356 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP FMA CYP71B15 AT3G28780 ATPCA RDR6 TRP3 ATGSTF2 AT4G16260 AT4G23670 AT4G27300 PDE334 AtTGG1 ATH3 LCR77 ATERF-2 NdhN Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ATPA ATPB NDHA |
| GO:0010033 response to organic substance | BP | 1.065e-05 | ACO4 OE23 ATCLH1 DRT112 ARF20 AIN1 GES ACO2 AT-EXP1 AT1G74640 GASA6 ATEXT1 XERICO ARR13 AT103-1A CYP71A13 ATGRP23 NF-YA4 NATA1 ATMPK12 HEL ATHCHIB Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATEBP AT3G23550 FMA AT3G26450 CYP71B15 RDR6 DIN11 TRP3 AT4G23670 PDE334 LHCB4.1 ARR21 GASA4 AtTGG1 ATH3 LCR77 ATERF-2 RBCL PETB |
| GO:0046483 heterocycle metabolic process | BP | 1.115e-05 | OE23 PSAO GAPA-2 PGDH ATCLH1 DRT112 Cpn60beta4 AtTRM9 ARF20 RGE1 AIN1 ACO2 RPF3 AtLIG6 AT1G74640 AT2G04400 AT2G13720 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 ADK LHCB4.3 ATCKX1 ATWRKY43 AT3G09250 ATEBP FMA CYP71B15 HIRA RDR6 TRP3 EDA33 AT4G08990 AT4G24350 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATERF-2 EMB2812 DYAD NdhN AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0008152 metabolic process | BP | 1.136e-05 | PSAD-2 AT1G04800 ACO4 OE23 PSAO PRIN2 GAPA-2 APK2A DECOY CP24 ATCCR1 PGDH CRK1 ATCLH1 ASK4 DRT112 WAK5 Cpn60beta4 AT1G29070 AB180 AB140 AtTRM9 ARF20 RGE1 AT1G54010 AT1G54220 AIN1 GES AT1G62030 ACO2 RPF3 AtLIG6 RBCS1A AT1G68260 AT1G74640 ATLUP1 EMB1047 AT1G80640 AT2G03310 XERICO AT2G04400 AT2G13720 AT2G13960 AT2G18400 CYCB1;4 ARR13 AT103-1A CYP71A13 NF-YA4 GTE01 AT2G35795 AT2G37240 ADK AT2G38380 NATA1 LHCB4.3 ATCKX1 AT2G43590 AtGH9B9 AtGH9B11 AtGH9B12 AT2G45720 ATPMM ATMPK12 ATWRKY43 HEL AT3G09250 AT3G09440 ATHCHIB ATEBP AAE7 RFC3 ATCAD4 CYCP2;1 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RPL12 HIRA AtXTH31 AT3G49070 ATPCA RDR6 DIN11 PSRP2 CP33 TRP3 PSRP5 EDA33 ATGSTF2 AT4G02940 AT4G08990 IAGLU AT4G16640 AT4G23670 AT4G24350 ATFSD1 AT4G27300 AT4G29090 FAD6 PDE334 PLAT1 LHCB4.1 ARR21 TPPI ATNADP-ME2 SSP5 AT5G12090 GASA4 AT5G16240 AT5G23650 AtTGG1 RBCS3B RBCS1B Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). AT5G42930 ATH3 ATERF-2 AT5G47260 EMB2812 CPI1 DYAD AT5G53150 PDC2 NdhN ATUBC7 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AGL31 AT5G65860 RLK PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 RPS14 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSBJ PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0016053 organic acid biosynthetic process | BP | 1.138e-05 | ACO4 OE23 PSAO CP24 PGDH DRT112 GES ACO2 AT1G68260 AT2G04400 CYP71A13 ADK ATPMM AOC2 AT3G26450 CYP71B15 TRP3 AT4G23670 FAD6 PDE334 PLAT1 GASA4 AT5G16240 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. NDHE |
| GO:0046394 carboxylic acid biosynthetic process | BP | 1.138e-05 | ACO4 OE23 PSAO CP24 PGDH DRT112 GES ACO2 AT1G68260 AT2G04400 CYP71A13 ADK ATPMM AOC2 AT3G26450 CYP71B15 TRP3 AT4G23670 FAD6 PDE334 PLAT1 GASA4 AT5G16240 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. NDHE |
| GO:1901360 organic cyclic compound metabolic proces... | BP | 1.140e-05 | ACO4 OE23 PSAO GAPA-2 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AtTRM9 ARF20 RGE1 AIN1 ACO2 RPF3 AtLIG6 AT1G74640 ATLUP1 AT2G04400 AT2G13720 AT2G13960 AT2G18400 ARR13 CYP71A13 NF-YA4 GTE01 ADK LHCB4.3 ATWRKY43 AT3G09250 ATEBP ATCAD4 FMA CYP71B15 HIRA RDR6 TRP3 EDA33 AT4G08990 IAGLU AT4G24350 AT4G29090 FAD6 PDE334 LHCB4.1 ARR21 ATNADP-ME2 AT5G23650 Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). ATERF-2 EMB2812 CPI1 DYAD NdhN AGL31 AT5G65860 PSBA MATK PSBK PSBI ATPA ATPF PSBD PSBC YCF9 PSAB PSAA NDHJ PSBG ATPE ATPB RBCL PETA PSAJ CLPP1 PSBB PSBN PSBH PETB YCF5 NDHD NDHE NDHA |
| GO:0008219 cell death | BP | 1.160e-05 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 ATEBP FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0016265 death | BP | 1.160e-05 | ACO4 OE23 PGDH ATCLH1 AT1G74640 CYP71A13 ATEBP FMA CYP71B15 TRP3 PDE334 ATNADP-ME2 |
| GO:0031348 negative regulation of defense response | BP | 1.180e-05 | ACO4 OE23 ATCLH1 AT1G74640 CYP71A13 FMA CYP71B15 TRP3 PDE334 |
| GO:0044710 single-organism metabolic process | BP | 1.183e-05 | ACO4 OE23 PSAO GAPA-2 DECOY CP24 ATCCR1 PGDH ATCLH1 DRT112 Cpn60beta4 AT1G54010 AT1G54220 AIN1 GES AT1G62030 ACO2 AtLIG6 RBCS1A AT1G68260 AT1G74640 ATLUP1 AT2G03310 XERICO AT2G04400 AT103-1A CYP71A13 NF-YA4 AT2G37240 ADK AT2G38380 NATA1 ATCKX1 AT2G45720 ATPMM AT3G09250 AT3G09440 AAE7 RFC3 ATCAD4 FMA AOC2 AT3G26450 CYP71B15 ATMDAR4 RDR6 DIN11 PSRP2 CP33 TRP3 PSRP5 ATGSTF2 AT4G02940 IAGLU AT4G23670 AT4G24350 ATFSD1 FAD6 PDE334 PLAT1 TPPI ATNADP-ME2 GASA4 AT5G16240 AtTGG1 RBCS3B RBCS1B Represents a non-function pseudogene homologous to AtMSU81 (At4g30870). AT5G42930 ATH3 ATERF-2 CPI1 DYAD PDC2 NdhN Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G65860 PSBA ATPA ATPF PSBD PSBC RPS14 NDHJ PSBG ATPE ATPB RBCL PETA PSAJ PSBB PETB NDHD NDHE NDHA |