4.0:Analysis result:Information of module
Col whole leaf 1dpi

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0009240
isopentenyl diphosphate biosynthetic pro...
BP1.635e-05Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ABC4
GO:0019288
isopentenyl diphosphate biosynthetic pro...
BP1.635e-05Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ABC4
GO:0046490
isopentenyl diphosphate metabolic proces...
BP1.635e-05Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ABC4
GO:0006090
pyruvate metabolic process
BP6.852e-05Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 MAC3A ABC4
GO:0008654
phospholipid biosynthetic process
BP7.352e-05Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ATCXXS1 ABC4
GO:0006720
isoprenoid metabolic process
BP1.383e-04Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 ABA4 NDF4 PDE326 AT1G14270 PES1 ABC4
GO:0006644
phospholipid metabolic process
BP1.950e-04Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ATCXXS1 ABC4
GO:0034470
ncRNA processing
BP2.577e-04ATG4 ATPRFB PCB2 AT3G63510 AT3G51140 AT4G02530 AT3G13180 AT1G51310
GO:0016108
tetraterpenoid metabolic process
BP3.905e-04ATG4 PCB2 AT4G02530 ABA4 PDE326
GO:0016116
carotenoid metabolic process
BP3.905e-04ATG4 PCB2 AT4G02530 ABA4 PDE326
GO:0008299
isoprenoid biosynthetic process
BP4.197e-04Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 ABA4 NDF4 PDE326 AT1G14270 ABC4
GO:0019682
glyceraldehyde-3-phosphate metabolic pro...
BP4.258e-04Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ABC4
GO:0006081
cellular aldehyde metabolic process
BP4.545e-04Cpn60beta4 ATG4 PCB2 AT3G63510 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ABC4
GO:0034660
ncRNA metabolic process
BP1.349e-03ATG4 ATPRFB PCB2 AT3G63510 AT3G51140 AT4G02530 AT3G13180 AT1G51310
GO:0008610
lipid biosynthetic process
BP1.753e-03Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 ABA4 NDF4 PDE326 AT1G14270 ATCXXS1 AT2G21860 PES1 ABC4
GO:0009073
aromatic amino acid family biosynthetic ...
BP2.197e-03ATG4 PCB2 AT3G51140 AT4G26370
GO:0010016
shoot system morphogenesis
BP2.458e-03ATG4 ATPRFB PCB2 AT4G34090 AT4G26370 AtVGT1 ABC4 LSH3
GO:0016109
tetraterpenoid biosynthetic process
BP2.960e-03ATG4 PCB2 AT4G02530 PDE326
GO:0016117
carotenoid biosynthetic process
BP2.960e-03ATG4 PCB2 AT4G02530 PDE326
GO:0006364
rRNA processing
BP3.340e-03ATG4 ATPRFB PCB2 AT3G51140 AT4G02530 AT3G13180
GO:0016072
rRNA metabolic process
BP3.340e-03ATG4 ATPRFB PCB2 AT3G51140 AT4G02530 AT3G13180
GO:0032787
monocarboxylic acid metabolic process
BP3.686e-03Cpn60beta4 ATG4 PCB2 AT3G63510 AT4G34090 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 MAC3A ABC4
GO:0042440
pigment metabolic process
BP3.714e-03ATG4 PCB2 ELP6 AtRbcX1 AT4G02530 PDE326 ARR7
GO:0006721
terpenoid metabolic process
BP4.664e-03ATG4 PCB2 AT4G02530 ABA4 PDE326 PES1
GO:0015995
chlorophyll biosynthetic process
BP4.995e-03ATG4 PCB2 AT4G02530 PDE326
GO:0044085
cellular component biogenesis
BP5.717e-03ATG4 ATPRFB PCB2 AT3G51140 AtXTH31 AT4G26370 HTA4 AT4G02530 AT3G13180 CCRL6 AT1G14270 ABC4 OTP51 AT2G27740 AT2G03200
GO:0006399
tRNA metabolic process
BP6.020e-03AT3G63510 AT3G51140 AT3G13180 AT1G51310
GO:0044255
cellular lipid metabolic process
BP6.166e-03Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 ATCXXS1 PES1 ABC4
GO:0009911
positive regulation of flower developmen...
BP6.308e-03AtVGT1 FT
GO:0090407
organophosphate biosynthetic process
BP6.438e-03Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ATCXXS1 ABC4
GO:0048518
positive regulation of biological proces...
BP6.886e-03Cpn60beta4 ATG4 ATPRFB PCB2 AT5G04080 AT4G26370 ELP6 AT4G02530 AtVGT1 TAC1 FT
GO:0006629
lipid metabolic process
BP6.947e-03Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 ATCXXS1 AT2G21860 PES1 AT1G62290 ABC4
GO:0046283
anthocyanin-containing compound metaboli...
BP7.447e-03ELP6 AtRbcX1 ARR7
GO:0006098
pentose-phosphate shunt
BP9.347e-03ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0051156
glucose 6-phosphate metabolic process
BP9.347e-03ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:2000243
positive regulation of reproductive proc...
BP9.529e-03AtVGT1 FT
GO:0006739
NADP metabolic process
BP9.626e-03ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0046496
nicotinamide nucleotide metabolic proces...
BP1.111e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0019362
pyridine nucleotide metabolic process
BP1.142e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0042254
ribosome biogenesis
BP1.173e-02ATG4 ATPRFB PCB2 AT3G51140 AT4G02530 AT3G13180
GO:0022613
ribonucleoprotein complex biogenesis
BP1.199e-02ATG4 ATPRFB PCB2 AT3G51140 AT4G02530 AT3G13180
GO:0072524
pyridine-containing compound metabolic p...
BP1.274e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0006779
porphyrin-containing compound biosynthet...
BP1.279e-02ATG4 PCB2 AT4G02530 PDE326
GO:0051188
cofactor biosynthetic process
BP1.308e-02ATG4 PCB2 AT4G02530 PDE326 ABC4
GO:0016114
terpenoid biosynthetic process
BP1.415e-02ATG4 PCB2 AT4G02530 ABA4 PDE326
GO:0033014
tetrapyrrole biosynthetic process
BP1.418e-02ATG4 PCB2 AT4G02530 PDE326
GO:0019684
photosynthesis, light reaction
BP1.490e-02ATPRFB AT4G02530 NDF4 AT1G14270 ABC4 OTP51
GO:0019752
carboxylic acid metabolic process
BP1.502e-02Cpn60beta4 ATG4 PCB2 AT3G63510 AT3G51140 AT4G34090 AT4G26370 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 MAC3A ABC4
GO:0042793
transcription from plastid promoter
BP1.534e-02ATG4 ATPRFB AT4G26370
GO:0046148
pigment biosynthetic process
BP1.815e-02ATG4 PCB2 AtRbcX1 AT4G02530 PDE326
GO:0009893
positive regulation of metabolic process
BP1.879e-02Cpn60beta4 ATG4 ATPRFB PCB2 AT5G04080 AT4G26370 AT4G02530 TAC1
GO:0031537
regulation of anthocyanin metabolic proc...
BP1.926e-02ELP6 ARR7
GO:0006733
oxidoreduction coenzyme metabolic proces...
BP1.993e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4
GO:0006732
coenzyme metabolic process
BP2.052e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4 ABC4
GO:0008033
tRNA processing
BP2.088e-02AT3G63510 AT1G51310
GO:0015994
chlorophyll metabolic process
BP2.126e-02ATG4 PCB2 AT4G02530 PDE326
GO:1901135
carbohydrate derivative metabolic proces...
BP2.140e-02Cpn60beta4 EMB2754 ATG4 PCB2 AT4G34090 AT4G02530 AT3G01620 NDF4 PDE326 AT1G14270 ABC4
GO:0009072
aromatic amino acid family metabolic pro...
BP2.188e-02ATG4 PCB2 AT3G51140 AT4G26370
GO:0009812
flavonoid metabolic process
BP2.188e-02AT5G04080 ELP6 AtRbcX1 ARR7
GO:0022411
cellular component disassembly
BP2.256e-02ATPRFB ATLOX1
GO:0043436
oxoacid metabolic process
BP2.291e-02Cpn60beta4 ATG4 PCB2 AT3G63510 AT3G51140 AT4G34090 AT4G26370 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 MAC3A ABC4
GO:0006082
organic acid metabolic process
BP2.311e-02Cpn60beta4 ATG4 PCB2 AT3G63510 AT3G51140 AT4G34090 AT4G26370 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 MAC3A ABC4
GO:0044711
single-organism biosynthetic process
BP2.408e-02Cpn60beta4 ATG4 ATPRFB PCB2 AT3G51140 AT4G34090 AT4G26370 AtRbcX1 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 ATCXXS1 MAC3A AT2G21860 PES1 BGLU46 ABC4 AT2G27740 AT2G03200
GO:0048582
positive regulation of post-embryonic de...
BP2.430e-02AtVGT1 FT
GO:0009965
leaf morphogenesis
BP2.447e-02ATG4 ATPRFB PCB2 AT4G34090
GO:0006487
protein N-linked glycosylation
BP2.608e-02EMB2754 AT3G01620
GO:0006623
protein targeting to vacuole
BP2.792e-02EMB2754 AT3G47550
GO:0072665
protein localization to vacuole
BP2.792e-02EMB2754 AT3G47550
GO:0072666
establishment of protein localization to...
BP2.792e-02EMB2754 AT3G47550
GO:0051240
positive regulation of multicellular org...
BP3.175e-02AtVGT1 FT
GO:0051186
cofactor metabolic process
BP3.306e-02ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 ABC4
GO:0007034
vacuolar transport
BP3.374e-02EMB2754 AT3G47550
GO:0051094
positive regulation of developmental pro...
BP3.374e-02AtVGT1 FT
GO:0006636
unsaturated fatty acid biosynthetic proc...
BP3.785e-02PCB2 AT4G02530
GO:0033559
unsaturated fatty acid metabolic process
BP3.785e-02PCB2 AT4G02530
GO:0048366
leaf development
BP3.986e-02ATG4 ATPRFB PCB2 AT4G34090 ELP6
GO:0006778
porphyrin-containing compound metabolic ...
BP4.013e-02ATG4 PCB2 AT4G02530 PDE326
GO:0048731
system development
BP4.086e-02EMB2754 ATG4 ATPRFB PCB2 AT3G51140 AT4G34090 FEY AT4G26370 ELP6 ATLOX1 TMKL1 AtVGT1 LEA14 ARR7 FT ABC4 LSH3 AT2G03200
GO:0033013
tetrapyrrole metabolic process
BP4.103e-02ATG4 PCB2 AT4G02530 PDE326
GO:0009657
plastid organization
BP4.234e-02ATG4 ATPRFB AT3G51140 AT4G26370 AT4G02530 AT3G13180
GO:0009891
positive regulation of biosynthetic proc...
BP4.362e-02ATG4 ATPRFB PCB2 AT5G04080 AT4G26370 TAC1
GO:0042180
cellular ketone metabolic process
BP4.380e-02AT3G63510 PDE326 ABC4
GO:0043085
positive regulation of catalytic activit...
BP4.380e-02Cpn60beta4 AT4G02530 TAC1
GO:0044093
positive regulation of molecular functio...
BP4.380e-02Cpn60beta4 AT4G02530 TAC1
GO:0016556
mRNA modification
BP4.510e-02Cpn60beta4 AT3G63510 ABC4
GO:0019637
organophosphate metabolic process
BP4.534e-02Cpn60beta4 ATG4 PCB2 AT4G34090 AT4G02530 NDF4 PDE326 AT1G14270 ATCXXS1 ABC4
GO:0048367
shoot system development
BP4.672e-02ATG4 ATPRFB PCB2 AT4G34090 AT4G26370 ELP6 AtVGT1 ARR7 FT ABC4 LSH3
GO:0015979
photosynthesis
BP5.105e-02ATPRFB AT4G02530 NDF4 AT1G14270 ABC4 OTP51
GO:0006091
generation of precursor metabolites and ...
BP5.492e-02ATPRFB AT4G02530 NDF4 AT1G14270 MAC3A ABC4 OTP51
GO:0045935
positive regulation of nucleobase-contai...
BP6.213e-02ATG4 ATPRFB PCB2 AT4G26370 TAC1
GO:0051173
positive regulation of nitrogen compound...
BP6.213e-02ATG4 ATPRFB PCB2 AT4G26370 TAC1
GO:0010103
stomatal complex morphogenesis
BP6.223e-02AT4G26370 AtVGT1 ABC4
GO:0042127
regulation of cell proliferation
BP6.867e-02AT3G51720 ELP6
GO:0044281
small molecule metabolic process
BP6.918e-02Cpn60beta4 ATG4 PCB2 AT3G63510 AT3G51140 AT4G34090 AT4G26370 AT4G02530 ABA4 ATLOX1 NDF4 PDE326 AT1G14270 ATCXXS1 MAC3A AT2G21860 PES1 ABC4
GO:0006396
RNA processing
BP6.986e-02ATPRFB PDE326 RPF2 AT1G51310 OTP51
GO:0010557
positive regulation of macromolecule bio...
BP6.986e-02ATG4 ATPRFB PCB2 AT4G26370 TAC1
GO:0009944
polarity specification of adaxial/abaxia...
BP7.130e-02TMKL1 LSH3
GO:0031328
positive regulation of cellular biosynth...
BP7.187e-02ATG4 ATPRFB PCB2 AT4G26370 TAC1
GO:0045017
glycerolipid biosynthetic process
BP7.343e-02Cpn60beta4 ATCXXS1 PES1
GO:0065001
specification of axis polarity
BP7.396e-02TMKL1 LSH3