pif4pif5 mut dark |
GOID/Term | Ontology | p-value | Genes |
---|---|---|---|
GO:0010017 red or far-red light signaling pathway | BP | 7.210e-04 | FAR1 ATHB-2 PIF5 FBI1 |
GO:0071489 cellular response to red or far red ligh... | BP | 7.210e-04 | FAR1 ATHB-2 PIF5 FBI1 |
GO:0006464 cellular protein modification process | BP | 1.132e-03 | FAR1 KINESIN-12A AT5G19880 AtCRLK2 AT5G63905 AT5G61350 AT5G59270 AT5G58410 SRT1 ATCPSF160 AT5G49780 XRI AT5G22450 AT5G03320 LECRKA4.3 ATHLECRK ATMND1 AT4G28670 AT4G25390 AT4G24480 AT4G20450 AT4G13160 UBI10 CRK41 CCT CPK33 RST1 ATRAPTOR1B CDC48C FBI1 PUB43 AT1G67880 AtPERK13 ABCA1 AT1G50410 HYP7 I9H AT2G16250 ANAC003 CPK19 AHK3 LRR ARSK1 |
GO:0036211 protein modification process | BP | 1.132e-03 | FAR1 KINESIN-12A AT5G19880 AtCRLK2 AT5G63905 AT5G61350 AT5G59270 AT5G58410 SRT1 ATCPSF160 AT5G49780 XRI AT5G22450 AT5G03320 LECRKA4.3 ATHLECRK ATMND1 AT4G28670 AT4G25390 AT4G24480 AT4G20450 AT4G13160 UBI10 CRK41 CCT CPK33 RST1 ATRAPTOR1B CDC48C FBI1 PUB43 AT1G67880 AtPERK13 ABCA1 AT1G50410 HYP7 I9H AT2G16250 ANAC003 CPK19 AHK3 LRR ARSK1 |
GO:0006486 protein glycosylation | BP | 1.565e-03 | AT5G58410 AT5G22450 CCT RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H |
GO:0009101 glycoprotein biosynthetic process | BP | 1.565e-03 | AT5G58410 AT5G22450 CCT RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H |
GO:0043413 macromolecule glycosylation | BP | 1.565e-03 | AT5G58410 AT5G22450 CCT RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H |
GO:0009100 glycoprotein metabolic process | BP | 1.634e-03 | AT5G58410 AT5G22450 CCT RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H |
GO:0070085 glycosylation | BP | 1.777e-03 | AT5G58410 AT5G22450 CCT RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H |
GO:0010413 glucuronoxylan metabolic process | BP | 2.809e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0045492 xylan biosynthetic process | BP | 2.952e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0009555 pollen development | BP | 3.202e-03 | KINESIN-12A BBX29 XRI ATMND1 ATGSL01 KINESIN-12B I9H DAA1 ATGSL08 |
GO:0071478 cellular response to radiation | BP | 3.221e-03 | FAR1 ATHB-2 PIF5 FBI1 |
GO:0071482 cellular response to light stimulus | BP | 3.221e-03 | FAR1 ATHB-2 PIF5 FBI1 |
GO:0045491 xylan metabolic process | BP | 3.413e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0043412 macromolecule modification | BP | 3.585e-03 | FAR1 KINESIN-12A AT5G19880 AtCRLK2 AT5G24840 AT5G63905 AT5G61350 AT5G59270 AT5G58410 SRT1 ATCPSF160 AT5G49780 XRI AT5G22450 AT5G03320 LECRKA4.3 ATHLECRK ATMND1 AT4G28670 AT4G25390 AT4G24480 AT4G20450 AT4G13160 UBI10 CRK41 CCT CPK33 RST1 ATRAPTOR1B CDC48C FBI1 PUB43 AT1G67880 AtPERK13 ABCA1 AT1G50410 HYP7 I9H AT2G16250 ANAC003 CPK19 AHK3 LRR ARSK1 |
GO:0044038 cell wall macromolecule biosynthetic pro... | BP | 3.927e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0070589 cellular component macromolecule biosynt... | BP | 3.927e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0070592 cell wall polysaccharide biosynthetic pr... | BP | 3.927e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0040034 regulation of development, heterochronic | BP | 4.867e-03 | BHLH134 CCT ZFP5 |
GO:0010410 hemicellulose metabolic process | BP | 5.353e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0006897 endocytosis | BP | 6.325e-03 | ERMO1 AT4G09940 ATPP2-A3 |
GO:1901137 carbohydrate derivative biosynthetic pro... | BP | 7.913e-03 | AT5G58410 AtNUDT11 AT5G22450 AST68 AHA7 PIF5 CCT AT3G17770 RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H AHA10 |
GO:0010016 shoot system morphogenesis | BP | 8.141e-03 | ATHB-2 BLH2 PIF5 ZPR3 TPR2 RST1 ATRAPTOR1B AT2G16250 LRR |
GO:0000278 mitotic cell cycle | BP | 8.944e-03 | FAR1 KINESIN-12A AT5G58410 ATMND1 TPR2 KINESIN-12B ATRAPTOR1B CDC48C HYP7 ABCC5 |
GO:0042546 cell wall biogenesis | BP | 9.434e-03 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H FUT7 ATFUT6 TBL30 AT2G01460 |
GO:0007049 cell cycle | BP | 9.771e-03 | FAR1 KINESIN-12A AT5G58410 XRI ATMND1 ATGSL01 TPR2 KINESIN-12B RST1 AT3G03130 ATRAPTOR1B CDC48C HYP7 ATGSL08 ABCC5 |
GO:0046434 organophosphate catabolic process | BP | 9.949e-03 | AtNUDT11 AT3G43220 5PTASE13 |
GO:0006487 protein N-linked glycosylation | BP | 1.020e-02 | CCT ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 |
GO:0055046 microgametogenesis | BP | 1.101e-02 | KINESIN-12A KINESIN-12B DAA1 |
GO:0000911 cytokinesis by cell plate formation | BP | 1.201e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0032506 cytokinetic process | BP | 1.201e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:1902410 mitotic cytokinetic process | BP | 1.201e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0007623 circadian rhythm | BP | 1.246e-02 | FAR1 PIF5 ATGSL01 FBI1 AHK3 |
GO:0048511 rhythmic process | BP | 1.246e-02 | FAR1 PIF5 ATGSL01 FBI1 AHK3 |
GO:0007602 phototransduction | BP | 1.378e-02 | PIF5 FBI1 |
GO:0009585 red, far-red light phototransduction | BP | 1.378e-02 | PIF5 FBI1 |
GO:0000281 mitotic cytokinesis | BP | 1.406e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0045893 positive regulation of transcription, DN... | BP | 1.425e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0051254 positive regulation of RNA metabolic pro... | BP | 1.425e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:1902680 positive regulation of RNA biosynthetic ... | BP | 1.425e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:1903508 positive regulation of nucleic acid-temp... | BP | 1.425e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0010383 cell wall polysaccharide metabolic proce... | BP | 1.465e-02 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H TBL30 AT2G01460 |
GO:0071214 cellular response to abiotic stimulus | BP | 1.504e-02 | FAR1 ATHB-2 PIF5 AT3G17770 FBI1 |
GO:0061640 cytoskeleton-dependent cytokinesis | BP | 1.517e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0045935 positive regulation of nucleobase-contai... | BP | 1.621e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0071554 cell wall organization or biogenesis | BP | 1.630e-02 | AT5G47530 ATEXO70C2 AT3G43220 AT4G18395 ATGSL01 RST1 AT1G50410 I9H FUT7 ATFUT6 AT1G16360 5PTASE13 ZFP5 TBL30 ATRAB-H1D ATGSL08 LCR10 AT2G01460 |
GO:0009583 detection of light stimulus | BP | 1.636e-02 | PIF5 FBI1 |
GO:0072348 sulfur compound transport | BP | 1.636e-02 | AST12 AST68 |
GO:0051173 positive regulation of nitrogen compound... | BP | 1.662e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0043687 post-translational protein modification | BP | 1.673e-02 | XRI ATMND1 CDC48C HYP7 |
GO:0044036 cell wall macromolecule metabolic proces... | BP | 1.698e-02 | AT5G47530 AT3G43220 RST1 AT1G50410 I9H ZFP5 TBL30 AT2G01460 |
GO:0055080 cation homeostasis | BP | 1.874e-02 | AST68 PIF5 HCC2 AHA10 ABCC5 |
GO:0048878 chemical homeostasis | BP | 1.886e-02 | AST68 PIF5 HCC2 AHA10 5PTASE13 ABCC5 |
GO:0055067 monovalent inorganic cation homeostasis | BP | 1.912e-02 | AHA10 ABCC5 |
GO:1901135 carbohydrate derivative metabolic proces... | BP | 1.921e-02 | AT5G58410 AtNUDT11 G6PD6 AT5G22450 AST68 AHA7 PIF5 CCT AT3G17770 RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H AHA10 SDH1-2 |
GO:0048532 anatomical structure arrangement | BP | 1.941e-02 | AT5G58410 AT5G48800 ZPR3 TPR2 RST1 ATRAPTOR1B ATGSL08 |
GO:0010628 positive regulation of gene expression | BP | 2.119e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0010557 positive regulation of macromolecule bio... | BP | 2.169e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0010212 response to ionizing radiation | BP | 2.191e-02 | FAR1 XRI ATMND1 ATGSL08 |
GO:0009639 response to red or far red light | BP | 2.216e-02 | FAR1 ATHB-2 AT5G58410 BHLH134 PIF5 RST1 CDC48C FBI1 |
GO:0044262 cellular carbohydrate metabolic process | BP | 2.332e-02 | AT5G47530 EXGT-A4 AT3G43220 ATGSL01 AT3G17770 RST1 AT1G50410 I9H 5PTASE13 TBL30 ATGSL08 BGAL13 AT2G01460 |
GO:0000910 cytokinesis | BP | 2.390e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0048507 meristem development | BP | 2.409e-02 | AT5G58410 AT5G48800 BHLH134 ZPR3 TPR2 RST1 ATRAPTOR1B ZFP5 ATGSL08 AHK3 |
GO:0033692 cellular polysaccharide biosynthetic pro... | BP | 2.433e-02 | AT5G47530 AT3G43220 ATGSL01 RST1 AT1G50410 I9H TBL30 ATGSL08 AT2G01460 |
GO:0048229 gametophyte development | BP | 2.459e-02 | KINESIN-12A BBX29 XRI NRPC2 ATMND1 ATGSL01 KINESIN-12B I9H DAA1 ATGSL08 |
GO:0031328 positive regulation of cellular biosynth... | BP | 2.488e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0010072 primary shoot apical meristem specificat... | BP | 2.512e-02 | TPR2 RST1 ATRAPTOR1B |
GO:0009582 detection of abiotic stimulus | BP | 2.519e-02 | PIF5 FBI1 |
GO:0010604 positive regulation of macromolecule met... | BP | 2.840e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0048506 regulation of timing of meristematic pha... | BP | 2.847e-02 | BHLH134 ZFP5 |
GO:0048510 regulation of timing of transition from ... | BP | 2.847e-02 | BHLH134 ZFP5 |
GO:0050801 ion homeostasis | BP | 2.887e-02 | AST68 PIF5 HCC2 AHA10 ABCC5 |
GO:0009150 purine ribonucleotide metabolic process | BP | 2.929e-02 | AtNUDT11 AHA7 AHA10 SDH1-2 |
GO:0042278 purine nucleoside metabolic process | BP | 2.929e-02 | AtNUDT11 AHA7 AHA10 SDH1-2 |
GO:0046128 purine ribonucleoside metabolic process | BP | 2.929e-02 | AtNUDT11 AHA7 AHA10 SDH1-2 |
GO:0071322 cellular response to carbohydrate stimul... | BP | 2.929e-02 | AT5G58410 RST1 5PTASE13 AHK3 |
GO:0031325 positive regulation of cellular metaboli... | BP | 3.158e-02 | BZIP17 FAR1 XRI ATERF-5 PIF5 ATMND1 CDC48C HYP7 AT1G04380 |
GO:0046838 phosphorylated carbohydrate dephosphoryl... | BP | 3.192e-02 | AT3G43220 5PTASE13 |
GO:0046855 inositol phosphate dephosphorylation | BP | 3.192e-02 | AT3G43220 5PTASE13 |
GO:0071545 inositol phosphate catabolic process | BP | 3.192e-02 | AT3G43220 5PTASE13 |
GO:0030003 cellular cation homeostasis | BP | 3.204e-02 | AST68 PIF5 AHA10 ABCC5 |
GO:0044723 single-organism carbohydrate metabolic p... | BP | 3.221e-02 | AT5G58410 AT5G47530 G6PD6 AT5G22450 AT3G43220 ATGSL01 CCT AT3G17770 RST1 ATRAPTOR1B AT1G67880 ABCA1 AT1G50410 I9H 5PTASE13 TBL30 ATGSL08 AtGolS4 BGAL13 GAUT2 AT2G01460 |
GO:0090421 embryonic meristem initiation | BP | 3.257e-02 | TPR2 RST1 ATRAPTOR1B |
GO:0006873 cellular ion homeostasis | BP | 3.799e-02 | AST68 PIF5 AHA10 ABCC5 |
GO:0006468 protein phosphorylation | BP | 3.834e-02 | AtCRLK2 AT5G61350 AT5G59270 AT5G49780 AT5G03320 LECRKA4.3 AT4G28670 AT4G25390 AT4G24480 AT4G20450 AT4G13160 CRK41 CPK33 AtPERK13 AT2G16250 CPK19 AHK3 LRR ARSK1 |
GO:0034645 cellular macromolecule biosynthetic proc... | BP | 3.848e-02 | BZIP17 FAR1 KINESIN-12A ATHB-2 AT5G19880 BLH2 AGL101 AT5G63905 AT5G61620 AT5G58410 SRT1 BBX29 XRI AT5G47530 ATERF-5 NRPC2 AT5G22450 WRKY26 ATHLECRK PIF5 ATEIF3C-1 ZPR3 AT3G43220 ATMND1 ATGSL01 LD CCT AtbZIP58 CPK33 RST1 AT3G03130 ATRAPTOR1B CDC48C ATMYBL2 AT1G67880 ABCA1 AT1G29160 AT1G50410 HYP7 I9H ZFP5 TBL30 AT1G04380 ATGSL08 ANAC003 ANAC023 AHK3 LRR AT2G01460 |
GO:0042451 purine nucleoside biosynthetic process | BP | 3.884e-02 | AtNUDT11 AHA7 AHA10 |
GO:0046129 purine ribonucleoside biosynthetic proce... | BP | 3.884e-02 | AtNUDT11 AHA7 AHA10 |
GO:0009152 purine ribonucleotide biosynthetic proce... | BP | 4.106e-02 | AtNUDT11 AHA7 AHA10 |
GO:1903047 mitotic cell cycle process | BP | 4.186e-02 | KINESIN-12A AT5G58410 TPR2 KINESIN-12B ATRAPTOR1B ABCC5 |
GO:0010014 meristem initiation | BP | 4.325e-02 | AT5G48800 TPR2 RST1 ATRAPTOR1B ATGSL08 |
GO:0048508 embryonic meristem development | BP | 4.334e-02 | TPR2 RST1 ATRAPTOR1B |
GO:0009851 auxin biosynthetic process | BP | 4.452e-02 | AST68 PIF5 YUC8 AtYUC2 |
GO:1901659 glycosyl compound biosynthetic process | BP | 4.461e-02 | AtNUDT11 AST68 AHA7 PIF5 AHA10 |
GO:0044264 cellular polysaccharide metabolic proces... | BP | 4.583e-02 | AT5G47530 EXGT-A4 AT3G43220 ATGSL01 RST1 AT1G50410 I9H TBL30 ATGSL08 AT2G01460 |
GO:0006796 phosphate-containing compound metabolic ... | BP | 4.616e-02 | AtCRLK2 AT5G24840 AT5G63905 AT5G61350 AT5G59270 AT5G49780 XRI AtNUDT11 G6PD6 AT5G18850 AT5G03320 LECRKA4.3 AHA7 PIF5 AT3G43220 AT4G28670 AT4G25390 AT4G24480 AT4G20450 AT4G13160 CRK41 CPK33 AtPERK13 AHA10 5PTASE13 AT2G16250 CPK19 AHK3 LRR SDH1-2 ARSK1 |
GO:0009692 ethylene metabolic process | BP | 4.625e-02 | PIF5 AT4G25390 AT1G24140 AT2G32030 |
GO:0009693 ethylene biosynthetic process | BP | 4.625e-02 | PIF5 AT4G25390 AT1G24140 AT2G32030 |
GO:0043449 cellular alkene metabolic process | BP | 4.625e-02 | PIF5 AT4G25390 AT1G24140 AT2G32030 |