sfr3 cold |
GOID/Term | Ontology | p-value | Genes |
---|---|---|---|
GO:0006354 DNA-templated transcription, elongation | BP | 2.094e-05 | YCF5 PETG PSBB PSBT RPL14 NDHJ ATPF RPS19 AT5G46160 NRPA1 EMB2289 GTB1 SCY1 |
GO:0042127 regulation of cell proliferation | BP | 5.814e-03 | ATTCP24 SMP2 RIP5 AT3G45830 DDL ELF8 AT2G27285 |
GO:0016998 cell wall macromolecule catabolic proces... | BP | 7.519e-03 | AtXTH31 ATCTL2 LYM1 |
GO:0016572 histone phosphorylation | BP | 9.425e-03 | AT5G17160 AT5G37010 AT3G17680 AtHaspin ELF8 |
GO:0008284 positive regulation of cell proliferatio... | BP | 1.217e-02 | SMP2 AT3G45830 DDL ELF8 AT2G27285 |
GO:0009225 nucleotide-sugar metabolic process | BP | 1.263e-02 | ATUSP UXS5 AT4G20460 AT1G70820 |
GO:0043562 cellular response to nitrogen levels | BP | 2.784e-02 | PYD2 ALN ATHB-15 |
GO:0071496 cellular response to external stimulus | BP | 2.855e-02 | NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATGLR3.4 ATHB-15 |
GO:0008283 cell proliferation | BP | 3.149e-02 | ATTCP24 SMP2 RIP5 OLI2 AT5G37010 AT3G45830 DDL AtHaspin ELF8 AT2G27285 |
GO:0031327 negative regulation of cellular biosynth... | BP | 3.278e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8 |
GO:0006012 galactose metabolic process | BP | 3.435e-02 | AtGolS2 AT4G20460 GAL1 |
GO:0043247 telomere maintenance in response to DNA ... | BP | 3.435e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0009890 negative regulation of biosynthetic proc... | BP | 3.453e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8 |
GO:0009641 shade avoidance | BP | 3.579e-02 | AT1G80360 BBX22 |
GO:0032204 regulation of telomere maintenance | BP | 3.787e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0032844 regulation of homeostatic process | BP | 4.157e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0042762 regulation of sulfur metabolic process | BP | 4.218e-02 | OLD5 AT1G80360 |
GO:0070972 protein localization to endoplasmic reti... | BP | 4.218e-02 | AT3G49100 AT1G75760 |
GO:0051052 regulation of DNA metabolic process | BP | 4.422e-02 | AT4G14200 AT5G08450 AT5G37010 ATUBA2 DMS3 AT3G45830 AtHaspin |
GO:0010252 auxin homeostasis | BP | 4.895e-02 | DFL1 ATSNX1 |
GO:0000723 telomere maintenance | BP | 4.949e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0032200 telomere organization | BP | 4.949e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0060249 anatomical structure homeostasis | BP | 4.949e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0010410 hemicellulose metabolic process | BP | 5.492e-02 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 AtMUR3 |
GO:0031669 cellular response to nutrient levels | BP | 5.573e-02 | NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15 |
GO:0009789 positive regulation of abscisic acid-act... | BP | 5.608e-02 | SNRK2-3 ATPLDDELTA |
GO:0046488 phosphatidylinositol metabolic process | BP | 5.717e-02 | BST1 AT5G40500 AT5G17670 AT5G06480 AT1G68070 ATCXXS1 |
GO:0010558 negative regulation of macromolecule bio... | BP | 5.746e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:2000113 negative regulation of cellular macromol... | BP | 5.746e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:0006598 polyamine catabolic process | BP | 5.809e-02 | FPS1 ATMYB4 ATVLN2 |
GO:0051172 negative regulation of nitrogen compound... | BP | 5.882e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8 |
GO:0031668 cellular response to extracellular stimu... | BP | 6.176e-02 | NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATHB-15 |
GO:0006566 threonine metabolic process | BP | 6.356e-02 | AT1G72810 ASA2 |
GO:1901421 positive regulation of response to alcoh... | BP | 6.356e-02 | SNRK2-3 ATPLDDELTA |
GO:0042752 regulation of circadian rhythm | BP | 6.735e-02 | AtTCP11 AtTIR1 ARR4 |
GO:0048646 anatomical structure formation involved ... | BP | 7.109e-02 | AT4G14200 AtTIR1 ATEXPB3 ATEXP8 LRS1 LYM1 AtRLP10 AtHaspin |
GO:0006357 regulation of transcription from RNA pol... | BP | 7.134e-02 | CCT GTB1 |
GO:0006949 syncytium formation | BP | 7.134e-02 | ATEXPB3 ATEXP8 |
GO:0010089 xylem development | BP | 7.221e-02 | ACL5 ATRABG3B ATHB-15 |
GO:0031667 response to nutrient levels | BP | 7.529e-02 | NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15 |
GO:0006071 glycerol metabolic process | BP | 7.941e-02 | AtGDPD6 AT2G27360 |
GO:0009226 nucleotide-sugar biosynthetic process | BP | 7.941e-02 | ATUSP AT1G70820 |
GO:0009306 protein secretion | BP | 7.941e-02 | EMB2289 SCY1 |
GO:0009828 plant-type cell wall loosening | BP | 7.941e-02 | ATEXPB3 ATEXP8 |
GO:0010020 chloroplast fission | BP | 7.941e-02 | ARC6 FTSZ2-2 |
GO:0072525 pyridine-containing compound biosyntheti... | BP | 7.941e-02 | OLD5 ATSOS4 |
GO:0009991 response to extracellular stimulus | BP | 8.272e-02 | NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATHB-15 |
GO:0045892 negative regulation of transcription, DN... | BP | 8.331e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:1902679 negative regulation of RNA biosynthetic ... | BP | 8.331e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:1903507 negative regulation of nucleic acid-temp... | BP | 8.331e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:0006857 oligopeptide transport | BP | 8.478e-02 | GTR1 ATMYB4 ATNUDX25 AT1G22570 |
GO:0015833 peptide transport | BP | 8.478e-02 | GTR1 ATMYB4 ATNUDX25 AT1G22570 |
GO:0051253 negative regulation of RNA metabolic pro... | BP | 8.513e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:0006342 chromatin silencing | BP | 8.645e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL ELF8 |
GO:0045814 negative regulation of gene expression, ... | BP | 8.645e-02 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL ELF8 |
GO:0042592 homeostatic process | BP | 8.683e-02 | YCF5 AtG3Pp4 AT5G08450 ACA8 ATCNGC4 DFL1 FPS1 ATF2 ATSNX1 ATUBA2 ATCBG AT3G45830 ATCXXS1 ATGLR3.4 |
GO:0019400 alditol metabolic process | BP | 8.776e-02 | AtGDPD6 AT2G27360 |
GO:0043572 plastid fission | BP | 8.776e-02 | ARC6 FTSZ2-2 |
GO:0006325 chromatin organization | BP | 8.823e-02 | AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 HTB1 AT1G54260 AT2G25270 GTB1 AtRLP10 AtHaspin ELF8 |
GO:0010332 response to gamma radiation | BP | 9.314e-02 | AT5G08450 ATUBA2 AT3G45830 |
GO:0016311 dephosphorylation | BP | 9.351e-02 | TOPP4 ATTCP24 AtTCP11 BST1 AT1G43900 APG2 BBX22 ATPAP8 AT2G25870 |
GO:0044036 cell wall macromolecule metabolic proces... | BP | 9.359e-02 | AT5G08450 IRX14 AT3G45830 AtXTH31 ATCTL2 ATGATL1 LYM1 AtMUR3 |
GO:0046434 organophosphate catabolic process | BP | 9.634e-02 | BST1 ATNUDX25 |
GO:0048645 organ formation | BP | 9.739e-02 | AT4G14200 AtTIR1 LRS1 LYM1 AtRLP10 AtHaspin |
GO:0009267 cellular response to starvation | BP | 9.758e-02 | NDHJ AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15 |
GO:0010413 glucuronoxylan metabolic process | BP | 9.761e-02 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |
GO:0000086 G2/M transition of mitotic cell cycle | BP | 9.873e-02 | AT4G14200 AT5G37010 AtHaspin |
GO:0010389 regulation of G2/M transition of mitotic... | BP | 9.873e-02 | AT4G14200 AT5G37010 AtHaspin |
GO:0044839 cell cycle G2/M phase transition | BP | 9.873e-02 | AT4G14200 AT5G37010 AtHaspin |
GO:1902749 regulation of cell cycle G2/M phase tran... | BP | 9.873e-02 | AT4G14200 AT5G37010 AtHaspin |
GO:0016568 chromatin modification | BP | 1.002e-01 | AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 AT2G25270 AtRLP10 AtHaspin ELF8 |
GO:0006576 cellular biogenic amine metabolic proces... | BP | 1.003e-01 | FPS1 ATMYB4 AT1G80360 ATVLN2 ATGATL1 AGP16 ASA2 |
GO:0045492 xylan biosynthetic process | BP | 1.012e-01 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |
GO:0010051 xylem and phloem pattern formation | BP | 1.016e-01 | AT4G14200 IRX14 ATGATL1 ATHB-15 |
GO:0045934 negative regulation of nucleobase-contai... | BP | 1.027e-01 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8 |
GO:0006995 cellular response to nitrogen starvation | BP | 1.052e-01 | ALN ATHB-15 |
GO:0042886 amide transport | BP | 1.060e-01 | GTR1 ATMYB4 ATNUDX25 AT1G22570 |
GO:0006304 DNA modification | BP | 1.069e-01 | AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8 |
GO:0006305 DNA alkylation | BP | 1.069e-01 | AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8 |
GO:0006306 DNA methylation | BP | 1.069e-01 | AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8 |
GO:0044728 DNA methylation or demethylation | BP | 1.069e-01 | AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8 |
GO:0033554 cellular response to stress | BP | 1.070e-01 | NDHJ ATTCP24 AtTCP11 AT5G08450 DDB2 ATSERAT1;1 OLI2 ATCNGC4 SUV2 RPS4 FSD3 AT5G09830 ATUBA2 AtTIR1 AT3G57280 DMS3 AT3G45830 AT4G23000 AT4G12740 ALN AT1G18090 ATPPCK2 LAC7 ATGATL1 AT1G70820 BBX22 ARR4 ATGLR3.4 ATHB-15 ATBAG6 |
GO:0031324 negative regulation of cellular metaboli... | BP | 1.076e-01 | AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8 |
GO:0045491 xylan metabolic process | BP | 1.086e-01 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |
GO:0051276 chromosome organization | BP | 1.115e-01 | AT4G14200 AT5G08450 SMP2 AT5G17160 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL AT3G17680 LYM1 HTB1 AT1G54260 AT2G25270 GTB1 AtRLP10 AtHaspin ELF8 |
GO:0042594 response to starvation | BP | 1.118e-01 | NDHJ AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15 |
GO:1901987 regulation of cell cycle phase transitio... | BP | 1.163e-01 | AT4G14200 AT5G37010 AtHaspin |
GO:1901990 regulation of mitotic cell cycle phase t... | BP | 1.163e-01 | AT4G14200 AT5G37010 AtHaspin |
GO:0009965 leaf morphogenesis | BP | 1.170e-01 | CSK AT4G14200 ATTCP24 AtTCP11 AT5G62840 OLI2 AtRLP10 ATHB-15 |
GO:0051567 histone H3-K9 methylation | BP | 1.202e-01 | AT4G14200 AT5G37010 ATUBA2 DMS3 AtHaspin ELF8 |
GO:0061647 histone H3-K9 modification | BP | 1.202e-01 | AT4G14200 AT5G37010 ATUBA2 DMS3 AtHaspin ELF8 |
GO:0009308 amine metabolic process | BP | 1.225e-01 | FPS1 ATCKX6 ATMYB4 AT1G80360 ATVLN2 ATGATL1 AGP16 ASA2 |
GO:0006974 cellular response to DNA damage stimulus | BP | 1.226e-01 | AT5G08450 DDB2 SUV2 AT5G09830 ATUBA2 DMS3 AT3G45830 AT4G12740 AT1G18090 |
GO:0009967 positive regulation of signal transducti... | BP | 1.234e-01 | SNRK2-3 ATPLDDELTA |
GO:0023056 positive regulation of signaling | BP | 1.234e-01 | SNRK2-3 ATPLDDELTA |
GO:0016569 covalent chromatin modification | BP | 1.243e-01 | AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 AtRLP10 AtHaspin ELF8 |
GO:0031048 chromatin silencing by small RNA | BP | 1.246e-01 | AT4G14200 AT5G37010 AT3G45830 ELF8 |
GO:0044038 cell wall macromolecule biosynthetic pro... | BP | 1.282e-01 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |
GO:0070589 cellular component macromolecule biosynt... | BP | 1.282e-01 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |
GO:0070592 cell wall polysaccharide biosynthetic pr... | BP | 1.282e-01 | AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 |