4.0:Analysis result:Information of module
sfr3 cold

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0006354
DNA-templated transcription, elongation
BP2.094e-05YCF5 PETG PSBB PSBT RPL14 NDHJ ATPF RPS19 AT5G46160 NRPA1 EMB2289 GTB1 SCY1
GO:0042127
regulation of cell proliferation
BP5.814e-03ATTCP24 SMP2 RIP5 AT3G45830 DDL ELF8 AT2G27285
GO:0016998
cell wall macromolecule catabolic proces...
BP7.519e-03AtXTH31 ATCTL2 LYM1
GO:0016572
histone phosphorylation
BP9.425e-03AT5G17160 AT5G37010 AT3G17680 AtHaspin ELF8
GO:0008284
positive regulation of cell proliferatio...
BP1.217e-02SMP2 AT3G45830 DDL ELF8 AT2G27285
GO:0009225
nucleotide-sugar metabolic process
BP1.263e-02ATUSP UXS5 AT4G20460 AT1G70820
GO:0043562
cellular response to nitrogen levels
BP2.784e-02PYD2 ALN ATHB-15
GO:0071496
cellular response to external stimulus
BP2.855e-02NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATGLR3.4 ATHB-15
GO:0008283
cell proliferation
BP3.149e-02ATTCP24 SMP2 RIP5 OLI2 AT5G37010 AT3G45830 DDL AtHaspin ELF8 AT2G27285
GO:0031327
negative regulation of cellular biosynth...
BP3.278e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8
GO:0006012
galactose metabolic process
BP3.435e-02AtGolS2 AT4G20460 GAL1
GO:0043247
telomere maintenance in response to DNA ...
BP3.435e-02AT5G08450 ATUBA2 AT3G45830
GO:0009890
negative regulation of biosynthetic proc...
BP3.453e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8
GO:0009641
shade avoidance
BP3.579e-02AT1G80360 BBX22
GO:0032204
regulation of telomere maintenance
BP3.787e-02AT5G08450 ATUBA2 AT3G45830
GO:0032844
regulation of homeostatic process
BP4.157e-02AT5G08450 ATUBA2 AT3G45830
GO:0042762
regulation of sulfur metabolic process
BP4.218e-02OLD5 AT1G80360
GO:0070972
protein localization to endoplasmic reti...
BP4.218e-02AT3G49100 AT1G75760
GO:0051052
regulation of DNA metabolic process
BP4.422e-02AT4G14200 AT5G08450 AT5G37010 ATUBA2 DMS3 AT3G45830 AtHaspin
GO:0010252
auxin homeostasis
BP4.895e-02DFL1 ATSNX1
GO:0000723
telomere maintenance
BP4.949e-02AT5G08450 ATUBA2 AT3G45830
GO:0032200
telomere organization
BP4.949e-02AT5G08450 ATUBA2 AT3G45830
GO:0060249
anatomical structure homeostasis
BP4.949e-02AT5G08450 ATUBA2 AT3G45830
GO:0010410
hemicellulose metabolic process
BP5.492e-02AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1 AtMUR3
GO:0031669
cellular response to nutrient levels
BP5.573e-02NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15
GO:0009789
positive regulation of abscisic acid-act...
BP5.608e-02SNRK2-3 ATPLDDELTA
GO:0046488
phosphatidylinositol metabolic process
BP5.717e-02BST1 AT5G40500 AT5G17670 AT5G06480 AT1G68070 ATCXXS1
GO:0010558
negative regulation of macromolecule bio...
BP5.746e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:2000113
negative regulation of cellular macromol...
BP5.746e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:0006598
polyamine catabolic process
BP5.809e-02FPS1 ATMYB4 ATVLN2
GO:0051172
negative regulation of nitrogen compound...
BP5.882e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8
GO:0031668
cellular response to extracellular stimu...
BP6.176e-02NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATHB-15
GO:0006566
threonine metabolic process
BP6.356e-02AT1G72810 ASA2
GO:1901421
positive regulation of response to alcoh...
BP6.356e-02SNRK2-3 ATPLDDELTA
GO:0042752
regulation of circadian rhythm
BP6.735e-02AtTCP11 AtTIR1 ARR4
GO:0048646
anatomical structure formation involved ...
BP7.109e-02AT4G14200 AtTIR1 ATEXPB3 ATEXP8 LRS1 LYM1 AtRLP10 AtHaspin
GO:0006357
regulation of transcription from RNA pol...
BP7.134e-02CCT GTB1
GO:0006949
syncytium formation
BP7.134e-02ATEXPB3 ATEXP8
GO:0010089
xylem development
BP7.221e-02ACL5 ATRABG3B ATHB-15
GO:0031667
response to nutrient levels
BP7.529e-02NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15
GO:0006071
glycerol metabolic process
BP7.941e-02AtGDPD6 AT2G27360
GO:0009226
nucleotide-sugar biosynthetic process
BP7.941e-02ATUSP AT1G70820
GO:0009306
protein secretion
BP7.941e-02EMB2289 SCY1
GO:0009828
plant-type cell wall loosening
BP7.941e-02ATEXPB3 ATEXP8
GO:0010020
chloroplast fission
BP7.941e-02ARC6 FTSZ2-2
GO:0072525
pyridine-containing compound biosyntheti...
BP7.941e-02OLD5 ATSOS4
GO:0009991
response to extracellular stimulus
BP8.272e-02NDHJ PYD2 AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 AT1G70820 ATHB-15
GO:0045892
negative regulation of transcription, DN...
BP8.331e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:1902679
negative regulation of RNA biosynthetic ...
BP8.331e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:1903507
negative regulation of nucleic acid-temp...
BP8.331e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:0006857
oligopeptide transport
BP8.478e-02GTR1 ATMYB4 ATNUDX25 AT1G22570
GO:0015833
peptide transport
BP8.478e-02GTR1 ATMYB4 ATNUDX25 AT1G22570
GO:0051253
negative regulation of RNA metabolic pro...
BP8.513e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:0006342
chromatin silencing
BP8.645e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL ELF8
GO:0045814
negative regulation of gene expression, ...
BP8.645e-02AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL ELF8
GO:0042592
homeostatic process
BP8.683e-02YCF5 AtG3Pp4 AT5G08450 ACA8 ATCNGC4 DFL1 FPS1 ATF2 ATSNX1 ATUBA2 ATCBG AT3G45830 ATCXXS1 ATGLR3.4
GO:0019400
alditol metabolic process
BP8.776e-02AtGDPD6 AT2G27360
GO:0043572
plastid fission
BP8.776e-02ARC6 FTSZ2-2
GO:0006325
chromatin organization
BP8.823e-02AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 HTB1 AT1G54260 AT2G25270 GTB1 AtRLP10 AtHaspin ELF8
GO:0010332
response to gamma radiation
BP9.314e-02AT5G08450 ATUBA2 AT3G45830
GO:0016311
dephosphorylation
BP9.351e-02TOPP4 ATTCP24 AtTCP11 BST1 AT1G43900 APG2 BBX22 ATPAP8 AT2G25870
GO:0044036
cell wall macromolecule metabolic proces...
BP9.359e-02AT5G08450 IRX14 AT3G45830 AtXTH31 ATCTL2 ATGATL1 LYM1 AtMUR3
GO:0046434
organophosphate catabolic process
BP9.634e-02BST1 ATNUDX25
GO:0048645
organ formation
BP9.739e-02AT4G14200 AtTIR1 LRS1 LYM1 AtRLP10 AtHaspin
GO:0009267
cellular response to starvation
BP9.758e-02NDHJ AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15
GO:0010413
glucuronoxylan metabolic process
BP9.761e-02AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1
GO:0000086
G2/M transition of mitotic cell cycle
BP9.873e-02AT4G14200 AT5G37010 AtHaspin
GO:0010389
regulation of G2/M transition of mitotic...
BP9.873e-02AT4G14200 AT5G37010 AtHaspin
GO:0044839
cell cycle G2/M phase transition
BP9.873e-02AT4G14200 AT5G37010 AtHaspin
GO:1902749
regulation of cell cycle G2/M phase tran...
BP9.873e-02AT4G14200 AT5G37010 AtHaspin
GO:0016568
chromatin modification
BP1.002e-01AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 AT2G25270 AtRLP10 AtHaspin ELF8
GO:0006576
cellular biogenic amine metabolic proces...
BP1.003e-01FPS1 ATMYB4 AT1G80360 ATVLN2 ATGATL1 AGP16 ASA2
GO:0045492
xylan biosynthetic process
BP1.012e-01AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1
GO:0010051
xylem and phloem pattern formation
BP1.016e-01AT4G14200 IRX14 ATGATL1 ATHB-15
GO:0045934
negative regulation of nucleobase-contai...
BP1.027e-01AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 ELF8
GO:0006995
cellular response to nitrogen starvation
BP1.052e-01ALN ATHB-15
GO:0042886
amide transport
BP1.060e-01GTR1 ATMYB4 ATNUDX25 AT1G22570
GO:0006304
DNA modification
BP1.069e-01AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8
GO:0006305
DNA alkylation
BP1.069e-01AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8
GO:0006306
DNA methylation
BP1.069e-01AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8
GO:0044728
DNA methylation or demethylation
BP1.069e-01AT5G37010 DMS3 AT4G12740 DDL AtHaspin ELF8
GO:0033554
cellular response to stress
BP1.070e-01NDHJ ATTCP24 AtTCP11 AT5G08450 DDB2 ATSERAT1;1 OLI2 ATCNGC4 SUV2 RPS4 FSD3 AT5G09830 ATUBA2 AtTIR1 AT3G57280 DMS3 AT3G45830 AT4G23000 AT4G12740 ALN AT1G18090 ATPPCK2 LAC7 ATGATL1 AT1G70820 BBX22 ARR4 ATGLR3.4 ATHB-15 ATBAG6
GO:0031324
negative regulation of cellular metaboli...
BP1.076e-01AT4G14200 AT5G37010 ATUBA2 DMS3 AT3G49100 AT3G45830 ATMYB4 AT4G23000 PHYE DDL ATPPCK2 AT1G80360 ELF8
GO:0045491
xylan metabolic process
BP1.086e-01AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1
GO:0051276
chromosome organization
BP1.115e-01AT4G14200 AT5G08450 SMP2 AT5G17160 AT5G37010 ATUBA2 DMS3 AT3G45830 PHYE DDL AT3G17680 LYM1 HTB1 AT1G54260 AT2G25270 GTB1 AtRLP10 AtHaspin ELF8
GO:0042594
response to starvation
BP1.118e-01NDHJ AtTIR1 AT4G23000 ALN ATPPCK2 LAC7 ATHB-15
GO:1901987
regulation of cell cycle phase transitio...
BP1.163e-01AT4G14200 AT5G37010 AtHaspin
GO:1901990
regulation of mitotic cell cycle phase t...
BP1.163e-01AT4G14200 AT5G37010 AtHaspin
GO:0009965
leaf morphogenesis
BP1.170e-01CSK AT4G14200 ATTCP24 AtTCP11 AT5G62840 OLI2 AtRLP10 ATHB-15
GO:0051567
histone H3-K9 methylation
BP1.202e-01AT4G14200 AT5G37010 ATUBA2 DMS3 AtHaspin ELF8
GO:0061647
histone H3-K9 modification
BP1.202e-01AT4G14200 AT5G37010 ATUBA2 DMS3 AtHaspin ELF8
GO:0009308
amine metabolic process
BP1.225e-01FPS1 ATCKX6 ATMYB4 AT1G80360 ATVLN2 ATGATL1 AGP16 ASA2
GO:0006974
cellular response to DNA damage stimulus
BP1.226e-01AT5G08450 DDB2 SUV2 AT5G09830 ATUBA2 DMS3 AT3G45830 AT4G12740 AT1G18090
GO:0009967
positive regulation of signal transducti...
BP1.234e-01SNRK2-3 ATPLDDELTA
GO:0023056
positive regulation of signaling
BP1.234e-01SNRK2-3 ATPLDDELTA
GO:0016569
covalent chromatin modification
BP1.243e-01AT4G14200 AT5G17160 AT5G37010 ATUBA2 DMS3 PHYE DDL AT3G17680 LYM1 AtRLP10 AtHaspin ELF8
GO:0031048
chromatin silencing by small RNA
BP1.246e-01AT4G14200 AT5G37010 AT3G45830 ELF8
GO:0044038
cell wall macromolecule biosynthetic pro...
BP1.282e-01AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1
GO:0070589
cellular component macromolecule biosynt...
BP1.282e-01AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1
GO:0070592
cell wall polysaccharide biosynthetic pr...
BP1.282e-01AT5G08450 IRX14 AT3G45830 ATCTL2 ATGATL1