4.0:Analysis result:Information of module

    Top 100 most enriched GO terms

GOID/Term	Ontology	p-value	Genes
GO:0090304 nucleic acid metabolic process	BP	1.094e-07	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 AT3G59040 GUN4 BPG2 SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0016070 RNA metabolic process	BP	2.759e-07	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G56850 AT5G49470 ATCUL4 AT5G44080 NF-YC12 AHK2 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 AT3G59040 GUN4 BPG2 SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G10930 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 ATMAP70-3 ANAC034 AtPUB12 AT2G16940 AT2G38300 ATGPA1
GO:0006139 nucleobase-containing compound metabolic...	BP	1.773e-05	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 AT3G59040 GUN4 BPG2 SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0016071 mRNA metabolic process	BP	2.148e-05	ATU2AF65A AT1G31920 HEN4 AT5G62840 AT5G56850 RARE1 BPG2 AT3G48200 SLOMO EMB1989 AT4G10930 EMB2369 AT2G33440 GDPDL2 AT3G25840 CRM3 CDC48C CPSF73-I AT1G18485 CBRLK1 STIPL1 AtMTR4 RNE AT1G03910 AT2G16940
GO:0009657 plastid organization	BP	4.600e-05	MDA1 DG1 HCF106 CAA33 PMI15 VAR3 AT5G13770 PMDH2 AT3G59040 AT3G49140 AT3G48200 PDE312 PGR3 EMB2369 AGY1 PRK AtCHUP1 ABI3 EMB1865 ATHPR1 ATECB2 FUG1 ATSCO1 AT1G65230 RNE ATSIG6 AtTLP18.3 ATGPA1
GO:0009658 chloroplast organization	BP	4.891e-05	MDA1 DG1 CAA33 PMI15 VAR3 AT5G13770 PMDH2 AT3G59040 AT3G48200 PGR3 EMB2369 AGY1 PRK AtCHUP1 EMB1865 ATECB2 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0006396 RNA processing	BP	6.962e-05	FAR1 AT4G15820 ATU2AF65A EMB2782 HEN4 ATCUL4 AT5G14500 AT5G11720 GAUT3 EMB1989 TPR9 ATPRP40B IDM1 ATCFM3A CRM3 CDC48C CPSF73-I STIPL1 CRWN2 AtMTR4 ATCAF2 RNE CHR35 AT1G22660 CHR3 ATRAD50 AT2G16940 ATGPA1
GO:0006281 DNA repair	BP	7.392e-05	FAR1 ATRAD18 ATCUL4 ATREV1 HAC11 ATATM ATMLH1 AT3G02400 DML2 SPA4 AtMTR4 DML1 ATRAD50 ATMAP70-3 PFU2 ATCOP1
GO:0046483 heterocycle metabolic process	BP	8.974e-05	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G23330 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 AT3G59040 GUN4 BPG2 ATDFD SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 DGD1 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AT2G21210 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0034641 cellular nitrogen compound metabolic pro...	BP	1.207e-04	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G23330 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 AT3G59040 GUN4 ATGCN2 BPG2 ATDFD SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 DGD1 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AT2G21210 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0006807 nitrogen compound metabolic process	BP	1.854e-04	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G53850 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G23330 AT5G14500 AT5G13980 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 AT3G59040 GUN4 ATGCN2 BPG2 ATDFD SIG3 ATATM AT3G48200 PDE312 AT3G46960 SHM1 GAUT3 SLOMO PGR3 NINJA CER2 EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 DGD1 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 AT1G26640 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AT2G42690 AT2G21210 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0006725 cellular aromatic compound metabolic pro...	BP	2.900e-04	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 ADL1E AT3G59040 GUN4 BPG2 ATDFD SIG3 ATATM AT3G48200 PDE312 AT3G46960 SHM1 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 DGD1 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AT2G21210 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0033554 cellular response to stress	BP	3.854e-04	FAR1 AT5G63710 ATRAD18 ATCUL4 ATREV1 AT5G44080 ATCLC-A AHK2 HAC11 PMDH2 ADL1E UGP3 ATATM SHM1 EX1 ATMLH1 PRK AT3G19370 AT3G02400 PDLZ2 DML2 DGD1 ATHPR1 CER8 SPA4 AtMTR4 ATPPC2 AT2G21560 DML1 AT2G42690 ATRAD50 ATMAP70-3 PFU2 ATBAG6 ATCOP1
GO:1901360 organic cyclic compound metabolic proces...	BP	4.164e-04	ATCG00800 ATCAO FAR1 AT4G15820 CHR23 AT5G20170 ATU2AF65A ATHMA1 AT1G31920 EMB2782 AT5G35170 DG1 ATDDM1 HEN4 AT5G62840 ATRAD18 ARF4 AT5G59700 AT5G56850 MGO1 AT5G49470 ATCUL4 ATREV1 AT5G44080 NF-YC12 AHK2 AT5G23330 AT5G14500 RARE1 AT5G11720 HAC11 PMDH2 ATCCD1 ADL1E AT3G59040 GUN4 BPG2 ATDFD SIG3 ATATM AT3G48200 PDE312 AT3G46960 SHM1 GAUT3 SLOMO PGR3 NINJA EMB1989 B160 AT4G18820 AT4G18060 AT4G10930 ATMLH1 EMB2369 AT4G00990 PRK AT2G33440 AT1G20370 GDPDL2 ZYP1 AT1G55090 AT1G50920 TPR9 AtCHUP1 ABI3 AT3G25840 ATPRP40B IDM1 EMB1865 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 DGD1 CDC48C CPSF73-I AT1G72550 ATHPR1 AT1G62310 SPA4 AT1G18485 ATECB2 CBRLK1 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 AT2G13440 AT1G65230 RNE CHR35 ATSIG6 DML1 AT2G21210 AtTLP18.3 AT1G22660 AT1G03910 CHR3 ATRAD50 AT2G32170 ATMAP70-3 ANAC034 AtPUB12 PFU2 AT2G16940 AT2G38300 AT2G14800 ATGPA1 ATCOP1
GO:0009902 chloroplast relocation	BP	4.269e-04	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0019750 chloroplast localization	BP	4.269e-04	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0051644 plastid localization	BP	4.269e-04	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0051667 establishment of plastid localization	BP	4.269e-04	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0045132 meiotic chromosome segregation	BP	4.883e-04	CHR23 ATRAD18 AT5G59700 ATATM AT3G46960 GAUT3 ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0051656 establishment of organelle localization	BP	5.213e-04	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0010467 gene expression	BP	6.048e-04	ATCG00800 ATCAO FAR1 CLPR4 AT4G15820 CHR23 AT5G20170 ATU2AF65A EMB2782 AT5G35170 DG1 ATDDM1 HEN4 ATRAD18 ARF4 SNX2a AT5G49470 ATCUL4 AT5G44080 NF-YC12 AHK2 AT5G14500 AT5G11720 HAC11 PMDH2 MAP2B GUN4 SIG3 ATATM PDE312 AT3G46960 GAUT3 NINJA EMB1989 B160 ATMLH1 EMB2369 AT4G00990 TPR9 AtCHUP1 ABI3 ATPRP40B IDM1 ATCFM3A AT3G02400 CRM3 PDLZ2 DML2 CDC48C CPSF73-I AT1G72550 AT1G62310 ACD FUG1 STIPL1 ATSCO1 CRWN2 RPOD1 AtMTR4 ATCAF2 RNE CHR35 AT2G40430 ATSIG6 DML1 AT1G22660 AT1G03910 CHR3 ATRAD50 ATMAP70-3 ANAC034 AtPUB12 AT2G16940 AT2G38300 ATGPA1
GO:0006996 organelle organization	BP	6.238e-04	FAR1 MDA1 CHR23 EMB2782 DG1 ATDDM1 ATRAD18 AT5G59700 MGO1 ATK3 HCF106 CAA33 ATCUL4 ATREV1 PMI15 AT5G22820 VAR3 AT5G13980 AT5G13770 PMDH2 EMB2817 AT3G59040 ATVPS33 AT3G49140 ATATM AT3G48200 PDE312 AT3G46960 AT3G45850 GAUT3 PGR3 AT4G18060 ATMLH1 EMB2369 AGY1 PRK AT1G20370 ZYP1 AtCHUP1 AT3G15120 ABI3 IDM1 EMB1865 CDC48C MAP65-8 CPSF73-I ATHPR1 ATECB2 FUG1 ATSCO1 CRWN2 ATMAP70-4 AtMTR4 AT1G65230 RNE CHR35 ATSIG6 DML1 AtTLP18.3 AT2G20330 CHR3 ATRAD50 ATMAP70-3 GC4 AT2G14800 ATGPA1
GO:0006302 double-strand break repair	BP	7.651e-04	FAR1 ATRAD18 ATATM ATMLH1 AT3G02400 AtMTR4 ATRAD50 ATMAP70-3
GO:0007059 chromosome segregation	BP	8.371e-04	CHR23 EMB2782 ATRAD18 AT5G59700 ATCUL4 ATATM AT3G46960 GAUT3 ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0006974 cellular response to DNA damage stimulus	BP	8.585e-04	FAR1 ATRAD18 ATCUL4 ATREV1 HAC11 ATATM ATMLH1 AT3G02400 DML2 SPA4 AtMTR4 DML1 ATRAD50 ATMAP70-3 PFU2 ATCOP1
GO:0051716 cellular response to stimulus	BP	1.386e-03	FAR1 EMB2782 AT5G63710 ATRAD18 SNX2a MGO1 AT5G49470 ATCUL4 AT5G46270 ATREV1 AT5G44080 ATCLC-A AHK2 HAC11 PMDH2 ADL1E GUN4 BPG2 UGP3 SIG3 ATATM SHM1 GAUT3 EX1 NINJA AT4G23740 ATMLH1 PRK TPR9 ATGLR3.3 ABI3 IDM1 AT3G19370 CIPK1 AT3G02400 PDLZ2 DML2 DGD1 CDC48C ATHPR1 AT1G63750 CER8 SPA4 CRWN2 RPOD1 AtMTR4 ATPPC2 AT2G21560 CHR35 ATSIG6 DML1 AT2G42690 CHR3 ATRAD50 ATMAP70-3 PFU2 ATBAG6 ATMPK12 ATGPA1 AT2G02780 ATCOP1
GO:0071478 cellular response to radiation	BP	1.409e-03	FAR1 SIG3 ATHPR1 RPOD1 ATSIG6 AT2G42690 ATGPA1
GO:0071482 cellular response to light stimulus	BP	1.409e-03	FAR1 SIG3 ATHPR1 RPOD1 ATSIG6 AT2G42690 ATGPA1
GO:0007062 sister chromatid cohesion	BP	1.775e-03	CHR23 EMB2782 ATRAD18 AT5G59700 ATCUL4 ATATM AT3G46960 GAUT3 ATMLH1 ATMAP70-3
GO:0009314 response to radiation	BP	1.928e-03	FAR1 CHR23 ATHMA1 ATRAD18 MGO1 AT5G47800 ATCUL4 ATREV1 PMI15 HAC11 PMDH2 SIG3 ATATM SHM1 GAUT3 AT4G33500 AGY1 PRK ATGLR3.3 TIC AT3G02400 CDC48C ATHPR1 SPA4 ATECB2 CBRLK1 RPOD1 AtMTR4 ATSIG6 AT2G42690 AtTLP18.3 AT2G20330 CHR3 ATRAD50 ATBAG6 ATGPA1 ATCOP1
GO:0006259 DNA metabolic process	BP	2.005e-03	FAR1 CHR23 ATDDM1 ATRAD18 AT5G59700 MGO1 ATCUL4 ATREV1 HAC11 ATATM GAUT3 AT4G18820 ATMLH1 ZYP1 IDM1 AT3G02400 DML2 SPA4 AtMTR4 CHR35 DML1 CHR3 ATRAD50 ATMAP70-3 PFU2 AT2G14800 ATCOP1
GO:0008380 RNA splicing	BP	2.317e-03	AT4G15820 ATU2AF65A AT5G14500 AT5G11720 EMB1989 TPR9 ATPRP40B ATCFM3A CDC48C STIPL1 AtMTR4 ATCAF2 AT2G16940
GO:0090351 seedling development	BP	2.356e-03	SNX2a MGO1 ATCUL4 AHK2 GAUT3 ATMLH1 ATSCO1 ATSIG6 CHR3 ATRAD50 ATGPA1
GO:0051321 meiotic cell cycle	BP	2.486e-03	CHR23 ATRAD18 AT5G59700 ATATM AT3G46960 GAUT3 ATMLH1 ATGSL01 ZYP1 ATGSL04 ATGSL03 ATMAP70-3 AT2G14800
GO:0016556 mRNA modification	BP	2.558e-03	AT1G31920 AT5G62840 AT5G56850 RARE1 BPG2 AT3G48200 EMB2369 GDPDL2 AT1G18485 CBRLK1 RNE
GO:0006397 mRNA processing	BP	2.706e-03	ATU2AF65A HEN4 CRM3 CDC48C CPSF73-I STIPL1 AtMTR4 RNE AT2G16940
GO:0042752 regulation of circadian rhythm	BP	2.883e-03	FAR1 TIC STIPL1 ATCOP1
GO:0051604 protein maturation	BP	2.883e-03	SNX2a MAP2B ACD AT1G03910
GO:1903046 meiotic cell cycle process	BP	3.060e-03	CHR23 ATRAD18 AT5G59700 ATATM AT3G46960 GAUT3 ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0051640 organelle localization	BP	3.548e-03	PMI15 PMDH2 AT3G48200 PGR3 PRK AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6
GO:0000375 RNA splicing, via transesterification re...	BP	3.592e-03	ATU2AF65A ATCFM3A CDC48C STIPL1 AtMTR4 ATCAF2 AT2G16940
GO:0000377 RNA splicing, via transesterification re...	BP	3.592e-03	ATU2AF65A ATCFM3A CDC48C STIPL1 AtMTR4 ATCAF2 AT2G16940
GO:0071214 cellular response to abiotic stimulus	BP	3.726e-03	FAR1 SIG3 PDLZ2 ATHPR1 RPOD1 ATSIG6 AT2G42690 ATGPA1
GO:0009416 response to light stimulus	BP	3.926e-03	FAR1 CHR23 ATHMA1 MGO1 AT5G47800 ATCUL4 ATREV1 PMI15 HAC11 PMDH2 SIG3 SHM1 GAUT3 AT4G33500 AGY1 PRK ATGLR3.3 TIC CDC48C ATHPR1 SPA4 ATECB2 CBRLK1 RPOD1 AtMTR4 ATSIG6 AT2G42690 AtTLP18.3 AT2G20330 CHR3 ATRAD50 ATBAG6 ATGPA1 ATCOP1
GO:0016109 tetraterpenoid biosynthetic process	BP	4.998e-03	PMDH2 ATCCD1 GUN4 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0016117 carotenoid biosynthetic process	BP	4.998e-03	PMDH2 ATCCD1 GUN4 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0031047 gene silencing by RNA	BP	5.227e-03	CHR23 EMB2782 ATDDM1 ATRAD18 AT3G46960 GAUT3 ATMLH1 TPR9 IDM1 CDC48C CPSF73-I CRWN2 AtMTR4 CHR35 CHR3 ATRAD50 ATMAP70-3
GO:0019374 galactolipid metabolic process	BP	5.279e-03	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0019375 galactolipid biosynthetic process	BP	5.279e-03	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0016108 tetraterpenoid metabolic process	BP	5.823e-03	PMDH2 ATCCD1 GUN4 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0016116 carotenoid metabolic process	BP	5.823e-03	PMDH2 ATCCD1 GUN4 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0009636 response to toxic substance	BP	7.067e-03	ATHMA1 AHK2 CLB6
GO:0016567 protein ubiquitination	BP	7.140e-03	FAR1 CHR23 MGO1 ATCUL4 GAUT3 CDC48C AtMTR4 CHR3 ATRAD50 AtPUB12 AT2G41980
GO:0009451 RNA modification	BP	7.303e-03	AT1G31920 AT5G62840 AT5G56850 RARE1 BPG2 AT3G48200 EMB2369 AT1G20370 GDPDL2 AT1G50920 AT1G18485 ATECB2 CBRLK1 AT2G13440 RNE
GO:0007129 synapsis	BP	7.587e-03	ATATM ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0045143 homologous chromosome segregation	BP	7.587e-03	ATATM ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0009247 glycolipid biosynthetic process	BP	7.642e-03	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0009893 positive regulation of metabolic process	BP	8.135e-03	ATCAO FAR1 CHR23 ATDDM1 AT5G63710 ATRAD18 PMDH2 GUN4 ATATM AT3G48200 PDE312 GAUT3 AT4G33500 AT4G18060 AtCHUP1 AT3G19000 ABI3 AT3G19370 CDC48C ATSCO1 AtMTR4 AT2G21560 ATSIG6 DML1 ATCOP1
GO:0009891 positive regulation of biosynthetic proc...	BP	8.344e-03	ATCAO FAR1 CHR23 AT5G63710 ATRAD18 PMDH2 GUN4 ATATM PDE312 GAUT3 AtCHUP1 ABI3 AT3G19370 CDC48C ATSCO1 AtMTR4 AT2G21560 ATSIG6 DML1 ATCOP1
GO:0070192 chromosome organization involved in meio...	BP	8.742e-03	ATATM ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:0006351 transcription, DNA-templated	BP	9.219e-03	ATCG00800 ATCAO FAR1 CHR23 AT5G20170 AT5G35170 DG1 ATDDM1 ATRAD18 ARF4 AT5G49470 AT5G44080 NF-YC12 AHK2 HAC11 PMDH2 GUN4 SIG3 ATATM PDE312 AT3G46960 GAUT3 NINJA EMB1989 B160 AT4G00990 AtCHUP1 ABI3 IDM1 AT3G02400 PDLZ2 CDC48C CPSF73-I AT1G62310 FUG1 ATSCO1 CRWN2 RPOD1 AtMTR4 RNE CHR35 ATSIG6 DML1 CHR3 ATMAP70-3 ANAC034 AtPUB12 AT2G38300
GO:0097659 nucleic acid-templated transcription	BP	9.219e-03	ATCG00800 ATCAO FAR1 CHR23 AT5G20170 AT5G35170 DG1 ATDDM1 ATRAD18 ARF4 AT5G49470 AT5G44080 NF-YC12 AHK2 HAC11 PMDH2 GUN4 SIG3 ATATM PDE312 AT3G46960 GAUT3 NINJA EMB1989 B160 AT4G00990 AtCHUP1 ABI3 IDM1 AT3G02400 PDLZ2 CDC48C CPSF73-I AT1G62310 FUG1 ATSCO1 CRWN2 RPOD1 AtMTR4 RNE CHR35 ATSIG6 DML1 CHR3 ATMAP70-3 ANAC034 AtPUB12 AT2G38300
GO:1901698 response to nitrogen compound	BP	9.548e-03	EMB2782 ATCLC-A ADL1E PME1 PRK TPR9 ATGLR3.3 IDM1 CDC48C CRWN2 AtMTR4 CHR35 AT2G21210 CHR3 ATRAD50 AtPUB12 ATMPK12
GO:0009640 photomorphogenesis	BP	9.818e-03	FAR1 CHR23 MGO1 ATCUL4 GAUT3 CDC48C SPA4 AtMTR4 CHR3 ATRAD50 ATCOP1
GO:0032774 RNA biosynthetic process	BP	9.852e-03	ATCG00800 ATCAO FAR1 CHR23 AT5G20170 AT5G35170 DG1 ATDDM1 ATRAD18 ARF4 AT5G49470 AT5G44080 NF-YC12 AHK2 HAC11 PMDH2 GUN4 SIG3 ATATM PDE312 AT3G46960 GAUT3 NINJA EMB1989 B160 AT4G00990 AtCHUP1 ABI3 IDM1 AT3G02400 PDLZ2 CDC48C CPSF73-I AT1G62310 FUG1 ATSCO1 CRWN2 RPOD1 AtMTR4 RNE CHR35 ATSIG6 DML1 CHR3 ATMAP70-3 ANAC034 AtPUB12 AT2G38300
GO:0034660 ncRNA metabolic process	BP	1.015e-02	PMDH2 AT3G59040 GUN4 PGR3 EMB2369 PRK AtCHUP1 EMB1865 AT1G72550 ATHPR1 ACD FUG1 ATSCO1 AtMTR4 AT2G13440 AT1G65230 RNE ATSIG6 AtTLP18.3 AT1G22660
GO:0032446 protein modification by small protein co...	BP	1.044e-02	FAR1 CHR23 MGO1 ATCUL4 GAUT3 CDC48C AtMTR4 CHR3 ATRAD50 AtPUB12 AT2G41980
GO:0000724 double-strand break repair via homologou...	BP	1.141e-02	FAR1 ATRAD18 ATATM ATMLH1 AtMTR4
GO:0000725 recombinational repair	BP	1.141e-02	FAR1 ATRAD18 ATATM ATMLH1 AtMTR4
GO:0009668 plastid membrane organization	BP	1.187e-02	HCF106 AT3G49140 PGR3 EMB2369 AGY1 AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6 ATGPA1
GO:0010027 thylakoid membrane organization	BP	1.187e-02	HCF106 AT3G49140 PGR3 EMB2369 AGY1 AtCHUP1 EMB1865 FUG1 ATSCO1 AT1G65230 RNE ATSIG6 ATGPA1
GO:0006074 (1->3)-beta-D-glucan metabolic process	BP	1.217e-02	ATGSL01 ATGSL04 ATGSL03
GO:0006075 (1->3)-beta-D-glucan biosynthetic proces...	BP	1.217e-02	ATGSL01 ATGSL04 ATGSL03
GO:0010100 negative regulation of photomorphogenesi...	BP	1.217e-02	ATCUL4 SPA4 ATCOP1
GO:0044802 single-organism membrane organization	BP	1.236e-02	AT5G63710 HCF106 PMDH2 ADL1E AT3G49140 PGR3 EMB2369 AGY1 PRK AtCHUP1 EMB1865 AT3G19370 FUG1 ATSCO1 AT1G65230 RNE AT2G21560 ATSIG6 ATGPA1
GO:0007126 meiotic nuclear division	BP	1.242e-02	CHR23 ATRAD18 AT5G59700 ATATM AT3G46960 GAUT3 ATMLH1 ZYP1 ATMAP70-3 AT2G14800
GO:1901699 cellular response to nitrogen compound	BP	1.322e-02	EMB2782 TPR9 ATGLR3.3 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0061024 membrane organization	BP	1.333e-02	AT5G63710 HCF106 PMDH2 ADL1E AT3G49140 PGR3 EMB2369 AGY1 PRK AtCHUP1 EMB1865 AT3G19370 FUG1 ATSCO1 AT1G65230 RNE AT2G21560 ATSIG6 ATGPA1
GO:0035196 production of miRNAs involved in gene si...	BP	1.376e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:1902589 single-organism organelle organization	BP	1.390e-02	FAR1 CHR23 EMB2782 DG1 ATDDM1 ATRAD18 AT5G59700 ATK3 ATCUL4 ATREV1 AT5G22820 AT5G13980 EMB2817 ATATM PDE312 AT3G46960 AT3G45850 GAUT3 AT4G18060 ATMLH1 ZYP1 AtCHUP1 AT3G15120 IDM1 CDC48C MAP65-8 CPSF73-I FUG1 ATSCO1 CRWN2 AtMTR4 RNE CHR35 CHR3 ATRAD50 ATMAP70-3 AT2G14800
GO:0009845 seed germination	BP	1.471e-02	MGO1 ATCUL4 AHK2 GAUT3 ATMLH1 ATSCO1 CHR3 ATRAD50 ATGPA1
GO:0051276 chromosome organization	BP	1.492e-02	FAR1 CHR23 EMB2782 ATDDM1 ATRAD18 AT5G59700 MGO1 ATCUL4 ATATM AT3G46960 GAUT3 ATMLH1 AT1G20370 ZYP1 AT3G15120 IDM1 CDC48C CPSF73-I CRWN2 AtMTR4 CHR35 DML1 CHR3 ATRAD50 ATMAP70-3 AT2G14800
GO:0010099 regulation of photomorphogenesis	BP	1.534e-02	ATCUL4 SPA4 ATCOP1
GO:0016246 RNA interference	BP	1.564e-02	EMB2782 ATDDM1 TPR9 IDM1 CDC48C CPSF73-I CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0016114 terpenoid biosynthetic process	BP	1.595e-02	PMDH2 ATCCD1 AT3G59580 GUN4 ABI3 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0006664 glycolipid metabolic process	BP	1.596e-02	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0046467 membrane lipid biosynthetic process	BP	1.596e-02	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0016458 gene silencing	BP	1.686e-02	CHR23 EMB2782 ATDDM1 ATRAD18 AT3G46960 GAUT3 ATMLH1 TPR9 IDM1 CDC48C CPSF73-I CRWN2 AtMTR4 CHR35 DML1 CHR3 ATRAD50 ATMAP70-3
GO:0009637 response to blue light	BP	1.728e-02	PMI15 AT4G33500 PRK ATHPR1 CBRLK1 ATSIG6 AtTLP18.3 ATGPA1
GO:0030422 production of siRNA involved in RNA inte...	BP	1.785e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0019222 regulation of metabolic process	BP	1.824e-02	ATCAO FAR1 CLPR4 CHR23 AT5G20170 EMB2782 ATDDM1 AT5G63710 ATRAD18 ARF4 AT5G49470 AT5G44080 NF-YC12 AHK2 HAC11 PMDH2 ADL1E GUN4 ATGCN2 SIG3 ATATM AT3G48200 PDE312 AT3G46960 GAUT3 AT4G33500 NINJA B160 AT4G18060 ATMLH1 AGY1 AT4G00990 PRK TPR9 AtCHUP1 AT3G19000 ABI3 IDM1 AT3G19370 AT3G02400 PDLZ2 DML2 DGD1 CDC48C CPSF73-I ATHPR1 AT1G62310 ATSCO1 CRWN2 RPOD1 AtMTR4 AT2G21560 CHR35 ATSIG6 DML1 AtTLP18.3 CHR3 ATRAD50 ATMAP70-3 ANAC034 AT2G38300 ATCOP1
GO:0035195 gene silencing by miRNA	BP	1.900e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0080090 regulation of primary metabolic process	BP	2.063e-02	ATCAO FAR1 CHR23 AT5G20170 ATDDM1 AT5G63710 ATRAD18 ARF4 AT5G49470 AT5G44080 NF-YC12 AHK2 HAC11 PMDH2 GUN4 ATGCN2 SIG3 ATATM PDE312 AT3G46960 GAUT3 NINJA B160 ATMLH1 AT4G00990 PRK AtCHUP1 ABI3 IDM1 AT3G19370 AT3G02400 PDLZ2 CDC48C CPSF73-I ATHPR1 AT1G62310 ATSCO1 CRWN2 RPOD1 AtMTR4 AT2G21560 CHR35 ATSIG6 DML1 AtTLP18.3 CHR3 ATMAP70-3 ANAC034 AT2G38300 ATCOP1
GO:1903509 liposaccharide metabolic process	BP	2.095e-02	UGP3 ATSPS4F PDLZ2 DGD1 ATPPC2 AT2G42690
GO:0010629 negative regulation of gene expression	BP	2.139e-02	CHR23 EMB2782 ATDDM1 ATRAD18 AT3G46960 GAUT3 NINJA ATMLH1 TPR9 IDM1 PDLZ2 CDC48C CPSF73-I CRWN2 AtMTR4 CHR35 DML1 CHR3 ATRAD50 ATMAP70-3
GO:0006721 terpenoid metabolic process	BP	2.144e-02	PMDH2 ATCCD1 AT3G59580 GUN4 ABI3 EMB1865 DGD1 PDE181 AT1G65230 ATSIG6 AT2G42690 AtTLP18.3
GO:0031050 dsRNA fragmentation	BP	2.145e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0043331 response to dsRNA	BP	2.145e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0070918 production of small RNA involved in gene...	BP	2.145e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50
GO:0071359 cellular response to dsRNA	BP	2.145e-02	EMB2782 TPR9 IDM1 CDC48C CRWN2 AtMTR4 CHR35 CHR3 ATRAD50