pif5 low R/FR |
GOID/Term | Ontology | p-value | Genes |
---|---|---|---|
GO:0010411 xyloglucan metabolic process | BP | 2.410e-03 | ATXT2 ATXYL1 ATXTH17 |
GO:0016126 sterol biosynthetic process | BP | 2.618e-03 | AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 FLA7 GATL8 CYP710A2 |
GO:0006066 alcohol metabolic process | BP | 3.095e-03 | AT5G21105 ABA1 AT5G51950 LRR1 CPH AT5G01260 AT3G48460 FLA2 GDPDL5 LTA2 AtSS2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 HY3 CYP710A2 |
GO:0016125 sterol metabolic process | BP | 3.709e-03 | AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 FLA7 GATL8 CYP710A2 |
GO:0010087 phloem or xylem histogenesis | BP | 4.326e-03 | ANAC083 AtMYB49 PIF6 CKRC1 ATRABG3B |
GO:0010017 red or far-red light signaling pathway | BP | 4.470e-03 | PIF6 PIF5 FBI1 HY3 |
GO:0046165 alcohol biosynthetic process | BP | 4.822e-03 | AT5G21105 ABA1 LRR1 CPH AT5G01260 AT3G48460 FLA2 LTA2 AtSS2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2 |
GO:0010817 regulation of hormone levels | BP | 4.986e-03 | JK218 LRR1 CPH PIF5 FLA2 ATXT2 GAMMA-TIP2 ACT2 LTA2 PIP1;3 AT1G76520 CKRC1 ATCKX5 HSL1 CHI2 FLA7 |
GO:0010089 xylem development | BP | 5.203e-03 | ANAC083 AtMYB49 PIF6 ATRABG3B |
GO:0006694 steroid biosynthetic process | BP | 5.482e-03 | AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2 |
GO:0065008 regulation of biological quality | BP | 5.511e-03 | ATPAP26 JK218 ATPDI2 ATCNGC4 ATBAG1 APRL7 LRR1 RIC4 CPH PIF5 BGAL2 ACO1 CAT2 AT4G33040 ATPDI7 ATNPR4 FLA2 ATXT2 GAMMA-TIP2 ACT2 LTA2 PIP1;3 AT1G76520 CKRC1 ATCKX5 HSL1 CHI2 FLA7 HY3 AT2G25890 |
GO:0071489 cellular response to red or far red ligh... | BP | 6.013e-03 | PIF6 PIF5 FBI1 HY3 |
GO:0019725 cellular homeostasis | BP | 1.018e-02 | ATPDI2 ATCNGC4 ATBAG1 APRL7 PIF5 BGAL2 CAT2 AT4G33040 ATPDI7 GAMMA-TIP2 HY3 |
GO:0009825 multidimensional cell growth | BP | 1.057e-02 | JK218 ATXT2 GAMMA-TIP2 ACT2 ATEXP5 HSL1 |
GO:0008202 steroid metabolic process | BP | 1.105e-02 | AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2 |
GO:0032940 secretion by cell | BP | 1.132e-02 | SEC10 RIC4 ATEXO70G1 AT1G09330 |
GO:0016049 cell growth | BP | 1.148e-02 | JK218 ATBAG1 RIC4 CYC2BAT ATHB-16 ATCESA2 ATCPK5 AGD12 FLA2 ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AT1G12500 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020 AT2G25800 |
GO:0046903 secretion | BP | 1.265e-02 | SEC10 RIC4 ATEXO70G1 AT1G09330 |
GO:0071478 cellular response to radiation | BP | 1.274e-02 | JK218 PIF6 PIF5 FBI1 HY3 |
GO:0071482 cellular response to light stimulus | BP | 1.274e-02 | JK218 PIF6 PIF5 FBI1 HY3 |
GO:0016129 phytosteroid biosynthetic process | BP | 1.301e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7 |
GO:0016132 brassinosteroid biosynthetic process | BP | 1.301e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7 |
GO:0006084 acetyl-CoA metabolic process | BP | 1.304e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 FLA7 |
GO:0009606 tropism | BP | 1.304e-02 | JK218 PIF5 FBI1 CKRC1 ARG1 HY3 |
GO:0016051 carbohydrate biosynthetic process | BP | 1.351e-02 | AtBAM3 JK218 ATPDI2 GAUT4 TUB8 AT3G48460 ATCESA2 TUB9 ATXT2 CARB ACT11 PAC1 QQS GAMMA-TIP2 ACT2 LSF1 AT1G72220 RGL HSL1 GAI GATL8 RGA BAM6 ARAD1 |
GO:0002684 positive regulation of immune system pro... | BP | 1.383e-02 | ATNPR4 AT4G19530 BOP2 |
GO:0050778 positive regulation of immune response | BP | 1.383e-02 | ATNPR4 AT4G19530 BOP2 |
GO:0009832 plant-type cell wall biogenesis | BP | 1.434e-02 | JK218 RIC4 ATCESA2 AT1G12500 HSL1 ATXYL1 FLA7 AT2G25800 |
GO:0016128 phytosteroid metabolic process | BP | 1.544e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7 |
GO:0016131 brassinosteroid metabolic process | BP | 1.544e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7 |
GO:0006637 acyl-CoA metabolic process | BP | 1.694e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 FLA7 |
GO:0035383 thioester metabolic process | BP | 1.694e-02 | LRR1 CPH FLA2 LTA2 PIP1;3 FLA7 |
GO:0007018 microtubule-based movement | BP | 1.723e-02 | TUB8 KAC1 AT3G45850 TUB9 |
GO:0009888 tissue development | BP | 1.811e-02 | ANAC083 JK218 AtMYB49 ATBAG1 AFB5 SPL2 RIC4 CYC2BAT PIF6 CDC2 ATHB-16 ATCPK5 AT4G28780 FLA2 ATSPS4F ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 CKRC1 HSL1 HYP7 FLA7 ABCG5 ATRABG3B HY3 BOP2 |
GO:0009312 oligosaccharide biosynthetic process | BP | 1.895e-02 | AtBAM3 RGL GAI RGA |
GO:0042546 cell wall biogenesis | BP | 2.171e-02 | JK218 RIC4 ATCESA2 GALS3 ATVPS9A AT1G12500 AT1G72220 HSL1 ATXYL1 ATFUT9 FLA7 AT2G25800 |
GO:0080147 root hair cell development | BP | 2.180e-02 | JK218 ATBAG1 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 |
GO:0045454 cell redox homeostasis | BP | 2.327e-02 | ATPDI2 APRL7 CAT2 AT4G33040 ATPDI7 |
GO:0006887 exocytosis | BP | 2.400e-02 | SEC10 RIC4 ATEXO70G1 |
GO:0042592 homeostatic process | BP | 2.420e-02 | ATPAP26 ATPDI2 ATCNGC4 ATBAG1 APRL7 PIF5 BGAL2 ACO1 CAT2 AT4G33040 ATPDI7 GAMMA-TIP2 HY3 |
GO:0000272 polysaccharide catabolic process | BP | 2.476e-02 | AtBAM3 LSF1 ATXYL1 BAM6 |
GO:0005975 carbohydrate metabolic process | BP | 2.507e-02 | AtBAM3 JK218 ATPDI2 GAUT4 TUB8 AT5G01260 BGAL2 AT3G48460 ATCESA2 ACO1 CAT2 TUB9 ATSPS4F ATXT2 CARB AtcwINV3 ACT11 PAC1 QQS GDPDL5 AT3G21960 UVH3 GAMMA-TIP2 ACT2 ATVPS9A RAP2.2 LSF1 AT1G12500 AT1G72220 RGL HSL1 ATXYL1 GAI PGK ATXTH17 BGLU6 GATL8 RGA BAM6 ARAD1 AT2G25800 |
GO:0046685 response to arsenic-containing substance | BP | 2.703e-02 | RAP2.2 PGK HY3 |
GO:0009966 regulation of signal transduction | BP | 2.849e-02 | PIF5 AT3G44330 ATNPR4 RGL GAI RGA |
GO:0023051 regulation of signaling | BP | 3.003e-02 | PIF5 AT3G44330 ATNPR4 RGL GAI RGA |
GO:0006970 response to osmotic stress | BP | 3.069e-02 | ANAC083 HHP1 ATPAP26 ATRD22 ABA1 AtMYB49 ATBAG1 TUB8 ATBZIP24 ACO1 FLA2 ABCG11 PAC1 GAMMA-TIP2 ACT2 PIP1;3 RGL AT1G63010 GAI AT1G61890 RGA ANNAT4 |
GO:0016556 mRNA modification | BP | 3.154e-02 | AT4G28780 AT4G19530 AT4G12830 AT3G10840 |
GO:0007602 phototransduction | BP | 3.166e-02 | PIF5 FBI1 |
GO:0009583 detection of light stimulus | BP | 3.166e-02 | PIF5 FBI1 |
GO:0009585 red, far-red light phototransduction | BP | 3.166e-02 | PIF5 FBI1 |
GO:0009785 blue light signaling pathway | BP | 3.166e-02 | JK218 FBI1 |
GO:0009806 lignan metabolic process | BP | 3.166e-02 | AT4G11190 AT1G65870 |
GO:0009807 lignan biosynthetic process | BP | 3.166e-02 | AT4G11190 AT1G65870 |
GO:0030522 intracellular receptor signaling pathway | BP | 3.166e-02 | JK218 FBI1 |
GO:0009630 gravitropism | BP | 3.208e-02 | PIF5 FBI1 CKRC1 ARG1 HY3 |
GO:0006073 cellular glucan metabolic process | BP | 3.210e-02 | AtBAM3 ATPDI2 ATCESA2 CAT2 ATXT2 QQS ACT2 LSF1 AT1G12500 ATXYL1 ATXTH17 BAM6 AT2G25800 |
GO:0044042 glucan metabolic process | BP | 3.210e-02 | AtBAM3 ATPDI2 ATCESA2 CAT2 ATXT2 QQS ACT2 LSF1 AT1G12500 ATXYL1 ATXTH17 BAM6 AT2G25800 |
GO:0010646 regulation of cell communication | BP | 3.497e-02 | PIF5 AT3G44330 ATNPR4 RGL GAI RGA |
GO:0090558 plant epidermis development | BP | 3.517e-02 | JK218 ATBAG1 AFB5 RIC4 CYC2BAT CDC2 ATCPK5 AT4G28780 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 ABCG5 HY3 |
GO:0006468 protein phosphorylation | BP | 3.633e-02 | JK218 CIPK20 AT5G41680 AT5G35960 LRR1 CYC2BAT CIPK2 AT3G56050 CDC2 CRK4 ATCPK5 SD2-5 ARK3 AT4G19530 CRCK2 AT1G51810 TMK1 AtPERK15 HSL1 AT1G11410 CIPK17 AT2G25220 AT1G27190 HY3 AT2G07020 |
GO:0009970 cellular response to sulfate starvation | BP | 3.798e-02 | CAT2 ATMGL |
GO:0050801 ion homeostasis | BP | 4.027e-02 | ATPAP26 ATCNGC4 ATBAG1 PIF5 BGAL2 ACO1 GAMMA-TIP2 HY3 |
GO:0040007 growth | BP | 4.051e-02 | JK218 ATBAG1 RIC4 CYC2BAT ATHB-16 ATCESA2 ATCPK5 AGD12 FLA2 ATSPS4F ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AT1G12500 AtPERK15 HSL1 CHI2 FLA7 AT1G09330 AT2G07020 AT2G25800 |
GO:0048469 cell maturation | BP | 4.056e-02 | JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 |
GO:0048764 trichoblast maturation | BP | 4.056e-02 | JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 |
GO:0048765 root hair cell differentiation | BP | 4.056e-02 | JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 |
GO:0048767 root hair elongation | BP | 4.331e-02 | JK218 ATBAG1 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 HSL1 |
GO:0002218 activation of innate immune response | BP | 4.473e-02 | AT4G19530 BOP2 |
GO:0002253 activation of immune response | BP | 4.473e-02 | AT4G19530 BOP2 |
GO:0005983 starch catabolic process | BP | 4.473e-02 | AtBAM3 LSF1 |
GO:0009958 positive gravitropism | BP | 4.473e-02 | CKRC1 ARG1 |
GO:0048506 regulation of timing of meristematic pha... | BP | 4.473e-02 | SPL2 ATHB-16 |
GO:0048510 regulation of timing of transition from ... | BP | 4.473e-02 | SPL2 ATHB-16 |
GO:0009629 response to gravity | BP | 4.509e-02 | PIF5 FBI1 CKRC1 ARG1 HY3 |
GO:0006833 water transport | BP | 4.538e-02 | ATBAG1 ACO1 GAMMA-TIP2 ACT2 PIP1;3 HY3 RGA |
GO:0042044 fluid transport | BP | 4.538e-02 | ATBAG1 ACO1 GAMMA-TIP2 ACT2 PIP1;3 HY3 RGA |
GO:0021700 developmental maturation | BP | 4.540e-02 | JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 |
GO:0010374 stomatal complex development | BP | 5.060e-02 | AFB5 CYC2BAT CDC2 AT4G28780 ABCG5 HY3 |
GO:0009651 response to salt stress | BP | 5.106e-02 | ANAC083 HHP1 ATRD22 AtMYB49 ATBAG1 TUB8 ATBZIP24 ACO1 FLA2 ABCG11 PAC1 GAMMA-TIP2 ACT2 PIP1;3 RGL AT1G63010 GAI AT1G61890 RGA ANNAT4 |
GO:0006995 cellular response to nitrogen starvation | BP | 5.188e-02 | CDC2 CAT2 |
GO:0009628 response to abiotic stimulus | BP | 5.211e-02 | AT1G44414 AtBAM3 ANAC083 HHP1 ATPAP26 ATRD22 ABA1 AGL69 JK218 ATMBD7 AtMYB49 ATBAG1 TUB8 PIF6 SDR1 PIF5 ATBZIP24 CDC2 ATHB-16 ACO1 CAT2 AT4G25260 AT4G19530 FLA2 ATSPS4F ATXT2 ABCG11 PAC1 UVH3 GAMMA-TIP2 ACT2 AT3G17740 RAP2.2 AT3G02480 AT3G08570 AtSS2 FBI1 PIP1;3 RGL CKRC1 ARG1 AT1G63010 HSL1 ATMGL CHI2 ATOCT3 GAI AT1G61890 HY3 RGA cdf3 ANNAT4 AGP26 |
GO:0044723 single-organism carbohydrate metabolic p... | BP | 5.313e-02 | AtBAM3 JK218 ATPDI2 GAUT4 TUB8 BGAL2 AT3G48460 ATCESA2 ACO1 TUB9 ATSPS4F ATXT2 CARB ACT11 PAC1 QQS GDPDL5 UVH3 GAMMA-TIP2 ACT2 ATVPS9A RAP2.2 LSF1 AT1G72220 RGL HSL1 GAI PGK GATL8 RGA BAM6 ARAD1 |
GO:0005976 polysaccharide metabolic process | BP | 5.367e-02 | AtBAM3 JK218 ATPDI2 ATCESA2 CAT2 ATXT2 QQS GAMMA-TIP2 ACT2 LSF1 AT1G12500 AT1G72220 HSL1 ATXYL1 ATXTH17 BAM6 ARAD1 AT2G25800 |
GO:0060560 developmental growth involved in morphog... | BP | 5.476e-02 | JK218 ATBAG1 RIC4 CYC2BAT ATCPK5 FLA2 ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020 |
GO:0009694 jasmonic acid metabolic process | BP | 5.508e-02 | ATST2A PIF5 LTA2 ATCKX5 PLAT2 AT1G61890 |
GO:0042445 hormone metabolic process | BP | 5.567e-02 | LRR1 CPH PIF5 FLA2 LTA2 PIP1;3 CKRC1 ATCKX5 CHI2 FLA7 |
GO:1901617 organic hydroxy compound biosynthetic pr... | BP | 5.587e-02 | AT5G21105 ABA1 LRR1 CPH AT5G01260 AT3G48460 FLA2 LTA2 AtSS2 PIP1;3 CKRC1 ATMLO2 CHI2 FLA7 GATL8 CYP710A2 |
GO:0055080 cation homeostasis | BP | 5.694e-02 | ATCNGC4 ATBAG1 PIF5 BGAL2 ACO1 GAMMA-TIP2 HY3 |
GO:0009639 response to red or far red light | BP | 5.883e-02 | ABA1 PIF6 PIF5 AT4G25260 ACT2 FBI1 CKRC1 GAI HY3 RGA |
GO:0042446 hormone biosynthetic process | BP | 5.930e-02 | LRR1 CPH PIF5 FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7 |
GO:0009251 glucan catabolic process | BP | 5.941e-02 | AtBAM3 LSF1 |
GO:0044247 cellular polysaccharide catabolic proces... | BP | 5.941e-02 | AtBAM3 LSF1 |
GO:0071483 cellular response to blue light | BP | 5.941e-02 | JK218 FBI1 |
GO:0080050 regulation of seed development | BP | 5.941e-02 | GAI RGA |
GO:0030243 cellulose metabolic process | BP | 5.979e-02 | ATPDI2 ATCESA2 ACT2 AT1G12500 BAM6 AT2G25800 |
GO:0010054 trichoblast differentiation | BP | 6.229e-02 | JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 |
GO:0009826 unidimensional cell growth | BP | 6.242e-02 | JK218 RIC4 CYC2BAT ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020 |
GO:0030003 cellular cation homeostasis | BP | 6.473e-02 | ATCNGC4 ATBAG1 PIF5 BGAL2 GAMMA-TIP2 HY3 |
GO:0043473 pigmentation | BP | 6.669e-02 | JK218 ATXT2 GAMMA-TIP2 ACT2 HSL1 |
GO:0043476 pigment accumulation | BP | 6.669e-02 | JK218 ATXT2 GAMMA-TIP2 ACT2 HSL1 |