4.0:Analysis result:Information of module
pif5 low R/FR

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0010411
xyloglucan metabolic process
BP2.410e-03ATXT2 ATXYL1 ATXTH17
GO:0016126
sterol biosynthetic process
BP2.618e-03AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 FLA7 GATL8 CYP710A2
GO:0006066
alcohol metabolic process
BP3.095e-03AT5G21105 ABA1 AT5G51950 LRR1 CPH AT5G01260 AT3G48460 FLA2 GDPDL5 LTA2 AtSS2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 HY3 CYP710A2
GO:0016125
sterol metabolic process
BP3.709e-03AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 FLA7 GATL8 CYP710A2
GO:0010087
phloem or xylem histogenesis
BP4.326e-03ANAC083 AtMYB49 PIF6 CKRC1 ATRABG3B
GO:0010017
red or far-red light signaling pathway
BP4.470e-03PIF6 PIF5 FBI1 HY3
GO:0046165
alcohol biosynthetic process
BP4.822e-03AT5G21105 ABA1 LRR1 CPH AT5G01260 AT3G48460 FLA2 LTA2 AtSS2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2
GO:0010817
regulation of hormone levels
BP4.986e-03JK218 LRR1 CPH PIF5 FLA2 ATXT2 GAMMA-TIP2 ACT2 LTA2 PIP1;3 AT1G76520 CKRC1 ATCKX5 HSL1 CHI2 FLA7
GO:0010089
xylem development
BP5.203e-03ANAC083 AtMYB49 PIF6 ATRABG3B
GO:0006694
steroid biosynthetic process
BP5.482e-03AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2
GO:0065008
regulation of biological quality
BP5.511e-03ATPAP26 JK218 ATPDI2 ATCNGC4 ATBAG1 APRL7 LRR1 RIC4 CPH PIF5 BGAL2 ACO1 CAT2 AT4G33040 ATPDI7 ATNPR4 FLA2 ATXT2 GAMMA-TIP2 ACT2 LTA2 PIP1;3 AT1G76520 CKRC1 ATCKX5 HSL1 CHI2 FLA7 HY3 AT2G25890
GO:0071489
cellular response to red or far red ligh...
BP6.013e-03PIF6 PIF5 FBI1 HY3
GO:0019725
cellular homeostasis
BP1.018e-02ATPDI2 ATCNGC4 ATBAG1 APRL7 PIF5 BGAL2 CAT2 AT4G33040 ATPDI7 GAMMA-TIP2 HY3
GO:0009825
multidimensional cell growth
BP1.057e-02JK218 ATXT2 GAMMA-TIP2 ACT2 ATEXP5 HSL1
GO:0008202
steroid metabolic process
BP1.105e-02AT5G21105 LRR1 CPH FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7 GATL8 CYP710A2
GO:0032940
secretion by cell
BP1.132e-02SEC10 RIC4 ATEXO70G1 AT1G09330
GO:0016049
cell growth
BP1.148e-02JK218 ATBAG1 RIC4 CYC2BAT ATHB-16 ATCESA2 ATCPK5 AGD12 FLA2 ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AT1G12500 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020 AT2G25800
GO:0046903
secretion
BP1.265e-02SEC10 RIC4 ATEXO70G1 AT1G09330
GO:0071478
cellular response to radiation
BP1.274e-02JK218 PIF6 PIF5 FBI1 HY3
GO:0071482
cellular response to light stimulus
BP1.274e-02JK218 PIF6 PIF5 FBI1 HY3
GO:0016129
phytosteroid biosynthetic process
BP1.301e-02LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7
GO:0016132
brassinosteroid biosynthetic process
BP1.301e-02LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7
GO:0006084
acetyl-CoA metabolic process
BP1.304e-02LRR1 CPH FLA2 LTA2 PIP1;3 FLA7
GO:0009606
tropism
BP1.304e-02JK218 PIF5 FBI1 CKRC1 ARG1 HY3
GO:0016051
carbohydrate biosynthetic process
BP1.351e-02AtBAM3 JK218 ATPDI2 GAUT4 TUB8 AT3G48460 ATCESA2 TUB9 ATXT2 CARB ACT11 PAC1 QQS GAMMA-TIP2 ACT2 LSF1 AT1G72220 RGL HSL1 GAI GATL8 RGA BAM6 ARAD1
GO:0002684
positive regulation of immune system pro...
BP1.383e-02ATNPR4 AT4G19530 BOP2
GO:0050778
positive regulation of immune response
BP1.383e-02ATNPR4 AT4G19530 BOP2
GO:0009832
plant-type cell wall biogenesis
BP1.434e-02JK218 RIC4 ATCESA2 AT1G12500 HSL1 ATXYL1 FLA7 AT2G25800
GO:0016128
phytosteroid metabolic process
BP1.544e-02LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7
GO:0016131
brassinosteroid metabolic process
BP1.544e-02LRR1 CPH FLA2 LTA2 PIP1;3 CHI2 FLA7
GO:0006637
acyl-CoA metabolic process
BP1.694e-02LRR1 CPH FLA2 LTA2 PIP1;3 FLA7
GO:0035383
thioester metabolic process
BP1.694e-02LRR1 CPH FLA2 LTA2 PIP1;3 FLA7
GO:0007018
microtubule-based movement
BP1.723e-02TUB8 KAC1 AT3G45850 TUB9
GO:0009888
tissue development
BP1.811e-02ANAC083 JK218 AtMYB49 ATBAG1 AFB5 SPL2 RIC4 CYC2BAT PIF6 CDC2 ATHB-16 ATCPK5 AT4G28780 FLA2 ATSPS4F ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 CKRC1 HSL1 HYP7 FLA7 ABCG5 ATRABG3B HY3 BOP2
GO:0009312
oligosaccharide biosynthetic process
BP1.895e-02AtBAM3 RGL GAI RGA
GO:0042546
cell wall biogenesis
BP2.171e-02JK218 RIC4 ATCESA2 GALS3 ATVPS9A AT1G12500 AT1G72220 HSL1 ATXYL1 ATFUT9 FLA7 AT2G25800
GO:0080147
root hair cell development
BP2.180e-02JK218 ATBAG1 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1
GO:0045454
cell redox homeostasis
BP2.327e-02ATPDI2 APRL7 CAT2 AT4G33040 ATPDI7
GO:0006887
exocytosis
BP2.400e-02SEC10 RIC4 ATEXO70G1
GO:0042592
homeostatic process
BP2.420e-02ATPAP26 ATPDI2 ATCNGC4 ATBAG1 APRL7 PIF5 BGAL2 ACO1 CAT2 AT4G33040 ATPDI7 GAMMA-TIP2 HY3
GO:0000272
polysaccharide catabolic process
BP2.476e-02AtBAM3 LSF1 ATXYL1 BAM6
GO:0005975
carbohydrate metabolic process
BP2.507e-02AtBAM3 JK218 ATPDI2 GAUT4 TUB8 AT5G01260 BGAL2 AT3G48460 ATCESA2 ACO1 CAT2 TUB9 ATSPS4F ATXT2 CARB AtcwINV3 ACT11 PAC1 QQS GDPDL5 AT3G21960 UVH3 GAMMA-TIP2 ACT2 ATVPS9A RAP2.2 LSF1 AT1G12500 AT1G72220 RGL HSL1 ATXYL1 GAI PGK ATXTH17 BGLU6 GATL8 RGA BAM6 ARAD1 AT2G25800
GO:0046685
response to arsenic-containing substance
BP2.703e-02RAP2.2 PGK HY3
GO:0009966
regulation of signal transduction
BP2.849e-02PIF5 AT3G44330 ATNPR4 RGL GAI RGA
GO:0023051
regulation of signaling
BP3.003e-02PIF5 AT3G44330 ATNPR4 RGL GAI RGA
GO:0006970
response to osmotic stress
BP3.069e-02ANAC083 HHP1 ATPAP26 ATRD22 ABA1 AtMYB49 ATBAG1 TUB8 ATBZIP24 ACO1 FLA2 ABCG11 PAC1 GAMMA-TIP2 ACT2 PIP1;3 RGL AT1G63010 GAI AT1G61890 RGA ANNAT4
GO:0016556
mRNA modification
BP3.154e-02AT4G28780 AT4G19530 AT4G12830 AT3G10840
GO:0007602
phototransduction
BP3.166e-02PIF5 FBI1
GO:0009583
detection of light stimulus
BP3.166e-02PIF5 FBI1
GO:0009585
red, far-red light phototransduction
BP3.166e-02PIF5 FBI1
GO:0009785
blue light signaling pathway
BP3.166e-02JK218 FBI1
GO:0009806
lignan metabolic process
BP3.166e-02AT4G11190 AT1G65870
GO:0009807
lignan biosynthetic process
BP3.166e-02AT4G11190 AT1G65870
GO:0030522
intracellular receptor signaling pathway
BP3.166e-02JK218 FBI1
GO:0009630
gravitropism
BP3.208e-02PIF5 FBI1 CKRC1 ARG1 HY3
GO:0006073
cellular glucan metabolic process
BP3.210e-02AtBAM3 ATPDI2 ATCESA2 CAT2 ATXT2 QQS ACT2 LSF1 AT1G12500 ATXYL1 ATXTH17 BAM6 AT2G25800
GO:0044042
glucan metabolic process
BP3.210e-02AtBAM3 ATPDI2 ATCESA2 CAT2 ATXT2 QQS ACT2 LSF1 AT1G12500 ATXYL1 ATXTH17 BAM6 AT2G25800
GO:0010646
regulation of cell communication
BP3.497e-02PIF5 AT3G44330 ATNPR4 RGL GAI RGA
GO:0090558
plant epidermis development
BP3.517e-02JK218 ATBAG1 AFB5 RIC4 CYC2BAT CDC2 ATCPK5 AT4G28780 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7 ABCG5 HY3
GO:0006468
protein phosphorylation
BP3.633e-02JK218 CIPK20 AT5G41680 AT5G35960 LRR1 CYC2BAT CIPK2 AT3G56050 CDC2 CRK4 ATCPK5 SD2-5 ARK3 AT4G19530 CRCK2 AT1G51810 TMK1 AtPERK15 HSL1 AT1G11410 CIPK17 AT2G25220 AT1G27190 HY3 AT2G07020
GO:0009970
cellular response to sulfate starvation
BP3.798e-02CAT2 ATMGL
GO:0050801
ion homeostasis
BP4.027e-02ATPAP26 ATCNGC4 ATBAG1 PIF5 BGAL2 ACO1 GAMMA-TIP2 HY3
GO:0040007
growth
BP4.051e-02JK218 ATBAG1 RIC4 CYC2BAT ATHB-16 ATCESA2 ATCPK5 AGD12 FLA2 ATSPS4F ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AT1G12500 AtPERK15 HSL1 CHI2 FLA7 AT1G09330 AT2G07020 AT2G25800
GO:0048469
cell maturation
BP4.056e-02JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7
GO:0048764
trichoblast maturation
BP4.056e-02JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7
GO:0048765
root hair cell differentiation
BP4.056e-02JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7
GO:0048767
root hair elongation
BP4.331e-02JK218 ATBAG1 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 HSL1
GO:0002218
activation of innate immune response
BP4.473e-02AT4G19530 BOP2
GO:0002253
activation of immune response
BP4.473e-02AT4G19530 BOP2
GO:0005983
starch catabolic process
BP4.473e-02AtBAM3 LSF1
GO:0009958
positive gravitropism
BP4.473e-02CKRC1 ARG1
GO:0048506
regulation of timing of meristematic pha...
BP4.473e-02SPL2 ATHB-16
GO:0048510
regulation of timing of transition from ...
BP4.473e-02SPL2 ATHB-16
GO:0009629
response to gravity
BP4.509e-02PIF5 FBI1 CKRC1 ARG1 HY3
GO:0006833
water transport
BP4.538e-02ATBAG1 ACO1 GAMMA-TIP2 ACT2 PIP1;3 HY3 RGA
GO:0042044
fluid transport
BP4.538e-02ATBAG1 ACO1 GAMMA-TIP2 ACT2 PIP1;3 HY3 RGA
GO:0021700
developmental maturation
BP4.540e-02JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7
GO:0010374
stomatal complex development
BP5.060e-02AFB5 CYC2BAT CDC2 AT4G28780 ABCG5 HY3
GO:0009651
response to salt stress
BP5.106e-02ANAC083 HHP1 ATRD22 AtMYB49 ATBAG1 TUB8 ATBZIP24 ACO1 FLA2 ABCG11 PAC1 GAMMA-TIP2 ACT2 PIP1;3 RGL AT1G63010 GAI AT1G61890 RGA ANNAT4
GO:0006995
cellular response to nitrogen starvation
BP5.188e-02CDC2 CAT2
GO:0009628
response to abiotic stimulus
BP5.211e-02AT1G44414 AtBAM3 ANAC083 HHP1 ATPAP26 ATRD22 ABA1 AGL69 JK218 ATMBD7 AtMYB49 ATBAG1 TUB8 PIF6 SDR1 PIF5 ATBZIP24 CDC2 ATHB-16 ACO1 CAT2 AT4G25260 AT4G19530 FLA2 ATSPS4F ATXT2 ABCG11 PAC1 UVH3 GAMMA-TIP2 ACT2 AT3G17740 RAP2.2 AT3G02480 AT3G08570 AtSS2 FBI1 PIP1;3 RGL CKRC1 ARG1 AT1G63010 HSL1 ATMGL CHI2 ATOCT3 GAI AT1G61890 HY3 RGA cdf3 ANNAT4 AGP26
GO:0044723
single-organism carbohydrate metabolic p...
BP5.313e-02AtBAM3 JK218 ATPDI2 GAUT4 TUB8 BGAL2 AT3G48460 ATCESA2 ACO1 TUB9 ATSPS4F ATXT2 CARB ACT11 PAC1 QQS GDPDL5 UVH3 GAMMA-TIP2 ACT2 ATVPS9A RAP2.2 LSF1 AT1G72220 RGL HSL1 GAI PGK GATL8 RGA BAM6 ARAD1
GO:0005976
polysaccharide metabolic process
BP5.367e-02AtBAM3 JK218 ATPDI2 ATCESA2 CAT2 ATXT2 QQS GAMMA-TIP2 ACT2 LSF1 AT1G12500 AT1G72220 HSL1 ATXYL1 ATXTH17 BAM6 ARAD1 AT2G25800
GO:0060560
developmental growth involved in morphog...
BP5.476e-02JK218 ATBAG1 RIC4 CYC2BAT ATCPK5 FLA2 ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020
GO:0009694
jasmonic acid metabolic process
BP5.508e-02ATST2A PIF5 LTA2 ATCKX5 PLAT2 AT1G61890
GO:0042445
hormone metabolic process
BP5.567e-02LRR1 CPH PIF5 FLA2 LTA2 PIP1;3 CKRC1 ATCKX5 CHI2 FLA7
GO:1901617
organic hydroxy compound biosynthetic pr...
BP5.587e-02AT5G21105 ABA1 LRR1 CPH AT5G01260 AT3G48460 FLA2 LTA2 AtSS2 PIP1;3 CKRC1 ATMLO2 CHI2 FLA7 GATL8 CYP710A2
GO:0055080
cation homeostasis
BP5.694e-02ATCNGC4 ATBAG1 PIF5 BGAL2 ACO1 GAMMA-TIP2 HY3
GO:0009639
response to red or far red light
BP5.883e-02ABA1 PIF6 PIF5 AT4G25260 ACT2 FBI1 CKRC1 GAI HY3 RGA
GO:0042446
hormone biosynthetic process
BP5.930e-02LRR1 CPH PIF5 FLA2 LTA2 PIP1;3 CKRC1 CHI2 FLA7
GO:0009251
glucan catabolic process
BP5.941e-02AtBAM3 LSF1
GO:0044247
cellular polysaccharide catabolic proces...
BP5.941e-02AtBAM3 LSF1
GO:0071483
cellular response to blue light
BP5.941e-02JK218 FBI1
GO:0080050
regulation of seed development
BP5.941e-02GAI RGA
GO:0030243
cellulose metabolic process
BP5.979e-02ATPDI2 ATCESA2 ACT2 AT1G12500 BAM6 AT2G25800
GO:0010054
trichoblast differentiation
BP6.229e-02JK218 ATBAG1 RIC4 ATCPK5 FLA2 ATXT2 GAMMA-TIP2 ACT2 AT-P4H-2 HSL1 HYP7
GO:0009826
unidimensional cell growth
BP6.242e-02JK218 RIC4 CYC2BAT ATXT2 KLCR2 GAMMA-TIP2 ACT2 ATEXP5 AtPERK15 HSL1 CHI2 AT1G09330 AT2G07020
GO:0030003
cellular cation homeostasis
BP6.473e-02ATCNGC4 ATBAG1 PIF5 BGAL2 GAMMA-TIP2 HY3
GO:0043473
pigmentation
BP6.669e-02JK218 ATXT2 GAMMA-TIP2 ACT2 HSL1
GO:0043476
pigment accumulation
BP6.669e-02JK218 ATXT2 GAMMA-TIP2 ACT2 HSL1