4.0:Analysis result:Information of module
scl3

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0009809
lignin biosynthetic process
BP1.112e-02HCT AT1G09510
GO:0000086
G2/M transition of mitotic cell cycle
BP1.546e-02ATMSI1 CYCD3
GO:0010389
regulation of G2/M transition of mitotic...
BP1.546e-02ATMSI1 CYCD3
GO:0044839
cell cycle G2/M phase transition
BP1.546e-02ATMSI1 CYCD3
GO:1902749
regulation of cell cycle G2/M phase tran...
BP1.546e-02ATMSI1 CYCD3
GO:0006661
phosphatidylinositol biosynthetic proces...
BP1.786e-02AT1G78480 AT1G11880
GO:1901987
regulation of cell cycle phase transitio...
BP1.786e-02ATMSI1 CYCD3
GO:1901990
regulation of mitotic cell cycle phase t...
BP1.786e-02ATMSI1 CYCD3
GO:0009808
lignin metabolic process
BP1.954e-02HCT AT1G09510
GO:0044770
cell cycle phase transition
BP1.954e-02ATMSI1 CYCD3
GO:0044772
mitotic cell cycle phase transition
BP1.954e-02ATMSI1 CYCD3
GO:0007346
regulation of mitotic cell cycle
BP2.789e-02ATMSI1 CYCD3
GO:0046488
phosphatidylinositol metabolic process
BP3.967e-02AT1G78480 AT1G11880
GO:0006505
GPI anchor metabolic process
BP4.907e-02393_
GO:0010955
negative regulation of protein processin...
BP4.907e-02614_
GO:0045861
negative regulation of proteolysis
BP4.907e-02614_
GO:0070613
regulation of protein processing
BP4.907e-02614_
GO:0006275
regulation of DNA replication
BP5.047e-02ATMSI1 CYCD3
GO:0030162
regulation of proteolysis
BP5.384e-02614_
GO:0009699
phenylpropanoid biosynthetic process
BP5.688e-02HCT AT1G09510
GO:0010564
regulation of cell cycle process
BP5.819e-02ATMSI1 CYCD3
GO:0006338
chromatin remodeling
BP5.859e-02821_
GO:0080090
regulation of primary metabolic process
BP5.931e-02ATMSI1 HCT AT5G46310 AT5G08460 SMC6A AT3G45220 CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0046474
glycerophospholipid biosynthetic process
BP6.085e-02AT1G78480 AT1G11880
GO:0006260
DNA replication
BP6.289e-02ATMSI1 SMC6A CYCD3
GO:0006743
ubiquinone metabolic process
BP6.802e-02240_
GO:0006744
ubiquinone biosynthetic process
BP6.802e-02240_
GO:0045787
positive regulation of cell cycle
BP6.802e-02821_
GO:0006301
postreplication repair
BP7.271e-02926_
GO:0051336
regulation of hydrolase activity
BP7.271e-02614_
GO:0048449
floral organ formation
BP7.475e-02ATMSI1 SMC6A
GO:0045017
glycerolipid biosynthetic process
BP7.764e-02AT1G78480 AT1G11880
GO:0009889
regulation of biosynthetic process
BP8.135e-02ATMSI1 HCT AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:1901661
quinone metabolic process
BP8.661e-02240_
GO:1901663
quinone biosynthetic process
BP8.661e-02240_
GO:0042181
ketone biosynthetic process
BP9.120e-02240_
GO:0009698
phenylpropanoid metabolic process
BP9.415e-02HCT AT1G09510
GO:0051225
spindle assembly
BP9.577e-02270_
GO:0006650
glycerophospholipid metabolic process
BP9.882e-02AT1G78480 AT1G11880
GO:0010363
regulation of plant-type hypersensitive ...
BP9.986e-02AAP3 HCT AT3G22160
GO:0009225
nucleotide-sugar metabolic process
BP1.003e-01133_
GO:0010193
response to ozone
BP1.003e-01824_
GO:0051052
regulation of DNA metabolic process
BP1.036e-01ATMSI1 CYCD3
GO:0007051
spindle organization
BP1.048e-01270_
GO:0048645
organ formation
BP1.083e-01ATMSI1 SMC6A
GO:0006612
protein targeting to membrane
BP1.102e-01AAP3 HCT AT3G22160
GO:0080135
regulation of cellular response to stres...
BP1.102e-01AAP3 HCT AT3G22160
GO:0043067
regulation of programmed cell death
BP1.124e-01AAP3 HCT AT3G22160
GO:0009626
plant-type hypersensitive response
BP1.134e-01AAP3 HCT AT3G22160
GO:0015696
ammonium transport
BP1.138e-01389_
GO:0034050
host programmed cell death induced by sy...
BP1.145e-01AAP3 HCT AT3G22160
GO:0010941
regulation of cell death
BP1.156e-01AAP3 HCT AT3G22160
GO:0046486
glycerolipid metabolic process
BP1.181e-01AT1G78480 AT1G11880
GO:0015802
basic amino acid transport
BP1.183e-01389_
GO:0043069
negative regulation of programmed cell d...
BP1.198e-01AAP3 AT3G22160
GO:0048444
floral organ morphogenesis
BP1.198e-01ATMSI1 SMC6A
GO:0048563
post-embryonic organ morphogenesis
BP1.198e-01ATMSI1 SMC6A
GO:0060548
negative regulation of cell death
BP1.214e-01AAP3 AT3G22160
GO:0060255
regulation of macromolecule metabolic pr...
BP1.225e-01ATMSI1 AT5G46310 AT5G08460 SMC6A AT3G45220 CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0072657
protein localization to membrane
BP1.232e-01AAP3 HCT AT3G22160
GO:0090150
establishment of protein localization to...
BP1.232e-01AAP3 HCT AT3G22160
GO:0010556
regulation of macromolecule biosynthetic...
BP1.235e-01ATMSI1 AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:2000112
regulation of cellular macromolecule bio...
BP1.235e-01ATMSI1 AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0019219
regulation of nucleobase-containing comp...
BP1.256e-01ATMSI1 AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0009886
post-embryonic morphogenesis
BP1.276e-01ATMSI1 SMC6A CYCD3
GO:0045088
regulation of innate immune response
BP1.288e-01AAP3 HCT AT3G22160
GO:0050776
regulation of immune response
BP1.299e-01AAP3 HCT AT3G22160
GO:0016485
protein processing
BP1.315e-01614_
GO:0051171
regulation of nitrogen compound metaboli...
BP1.331e-01ATMSI1 AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0002682
regulation of immune system process
BP1.333e-01AAP3 HCT AT3G22160
GO:0031326
regulation of cellular biosynthetic proc...
BP1.336e-01ATMSI1 AT5G46310 AT5G08460 SMC6A CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0070925
organelle assembly
BP1.359e-01270_
GO:0031323
regulation of cellular metabolic process
BP1.404e-01ATMSI1 AT5G46310 AT5G08460 SMC6A AT3G45220 CYCD3 ANAC018 AtTLP4 AT4G00270
GO:0012501
programmed cell death
BP1.425e-01AAP3 HCT AT3G22160
GO:0006259
DNA metabolic process
BP1.426e-01ATMSI1 SMC6A CYCD3 AT2G18600
GO:0008283
cell proliferation
BP1.434e-01ATMSI1 CYCD3
GO:0009805
coumarin biosynthetic process
BP1.445e-01639_
GO:0009804
coumarin metabolic process
BP1.489e-01639_
GO:0048523
negative regulation of cellular process
BP1.491e-01AAP3 SMC6A AT3G45220 AT3G22160
GO:0032269
negative regulation of cellular protein ...
BP1.616e-01614_
GO:0051248
negative regulation of protein metabolic...
BP1.616e-01614_
GO:0019222
regulation of metabolic process
BP1.631e-01ATMSI1 HCT AT5G46310 AT5G08460 SMC6A AT3G45220 CYCD3 ANAC018 AtTLP4 AT4G00270
GO:1903047
mitotic cell cycle process
BP1.680e-01ATMSI1 CYCD3
GO:0009741
response to brassinosteroid
BP1.701e-01270_
GO:0008219
cell death
BP1.713e-01AAP3 HCT AT3G22160
GO:0016265
death
BP1.713e-01AAP3 HCT AT3G22160
GO:0006281
DNA repair
BP1.733e-01SMC6A AT2G18600
GO:0000724
double-strand break repair via homologou...
BP1.742e-01588_
GO:0000725
recombinational repair
BP1.742e-01588_
GO:0051726
regulation of cell cycle
BP1.751e-01ATMSI1 CYCD3
GO:0006862
nucleotide transport
BP1.948e-01389_
GO:0048447
sepal morphogenesis
BP1.948e-01588_
GO:0048451
petal formation
BP1.948e-01588_
GO:0048453
sepal formation
BP1.948e-01588_
GO:0031347
regulation of defense response
BP2.004e-01AAP3 HCT AT3G22160
GO:0048646
anatomical structure formation involved ...
BP2.005e-01ATMSI1 SMC6A
GO:0022402
cell cycle process
BP2.017e-01ATMSI1 SMC6A CYCD3
GO:0009555
pollen development
BP2.023e-01ATMSI1 TTL2
GO:0048442
sepal development
BP2.029e-01588_
GO:0048464
flower calyx development
BP2.029e-01588_