4.0:Analysis result:Information of module
| line J2731-5 days control + 2 days salt s |
Top 100 most enriched GO terms
| GOID/Term | Ontology | p-value | Genes |
|---|---|---|---|
| GO:0031048 chromatin silencing by small RNA | BP | 9.295e-05 | FCA ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 AtXRN3 EMB2795 |
| GO:0006342 chromatin silencing | BP | 4.663e-04 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0045814 negative regulation of gene expression, ... | BP | 5.185e-04 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0006346 methylation-dependent chromatin silencin... | BP | 6.844e-04 | ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0031047 gene silencing by RNA | BP | 3.334e-03 | FCA ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0007346 regulation of mitotic cell cycle | BP | 4.218e-03 | ATCAP-C ATK1 TCTP AT1G05440 EMB2795 |
| GO:0016458 gene silencing | BP | 4.341e-03 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0009553 embryo sac development | BP | 5.061e-03 | FCA AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 AT1G15330 ATRPA1A |
| GO:0009560 embryo sac egg cell differentiation | BP | 6.502e-03 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0007292 female gamete generation | BP | 6.861e-03 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0000086 G2/M transition of mitotic cell cycle | BP | 7.109e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0010389 regulation of G2/M transition of mitotic... | BP | 7.109e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0044839 cell cycle G2/M phase transition | BP | 7.109e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:1902749 regulation of cell cycle G2/M phase tran... | BP | 7.109e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0010267 production of ta-siRNAs involved in RNA ... | BP | 7.379e-03 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:1901987 regulation of cell cycle phase transitio... | BP | 8.415e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:1901990 regulation of mitotic cell cycle phase t... | BP | 8.415e-03 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0022411 cellular component disassembly | BP | 8.770e-03 | ACD5 TCTP LEA7 |
| GO:0045892 negative regulation of transcription, DN... | BP | 9.945e-03 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0051253 negative regulation of RNA metabolic pro... | BP | 9.945e-03 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:1902679 negative regulation of RNA biosynthetic ... | BP | 9.945e-03 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:1903507 negative regulation of nucleic acid-temp... | BP | 9.945e-03 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0044770 cell cycle phase transition | BP | 1.065e-02 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0044772 mitotic cell cycle phase transition | BP | 1.065e-02 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0045934 negative regulation of nucleobase-contai... | BP | 1.117e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0051172 negative regulation of nitrogen compound... | BP | 1.117e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0014070 response to organic cyclic compound | BP | 1.192e-02 | AER ATTRP1 ATCAP-C ARA8 ATGSL12 ATWRKY28 ATCPK4 IBR1 FMA AT3G17120 ANAC055 ATBS1 ARP4 ARF1 SMC3 UGT73B4 |
| GO:0040029 regulation of gene expression, epigeneti... | BP | 1.261e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0022412 cellular process involved in reproductio... | BP | 1.350e-02 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0010558 negative regulation of macromolecule bio... | BP | 1.358e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:2000113 negative regulation of cellular macromol... | BP | 1.358e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0031327 negative regulation of cellular biosynth... | BP | 1.395e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:1903046 meiotic cell cycle process | BP | 1.410e-02 | FCA ATCAP-C ATK1 ARP4 AtXRN3 ATRPA1A |
| GO:0031324 negative regulation of cellular metaboli... | BP | 1.430e-02 | FCA ATCAP-C ATGSL12 ATK1 AtPFA-DSP4 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0051567 histone H3-K9 methylation | BP | 1.472e-02 | ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 EMB2795 |
| GO:0061647 histone H3-K9 modification | BP | 1.472e-02 | ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 EMB2795 |
| GO:0009890 negative regulation of biosynthetic proc... | BP | 1.472e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 EMB2795 |
| GO:0022402 cell cycle process | BP | 1.535e-02 | FCA BUB3.2 ATCAP-C ATGSL12 ATK1 TCTP AT1G05440 ARP4 AtXRN3 SMC3 ATRPA1A EMB2795 |
| GO:0006305 DNA alkylation | BP | 1.669e-02 | ATCAP-C ATK1 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0006306 DNA methylation | BP | 1.669e-02 | ATCAP-C ATK1 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0035196 production of miRNAs involved in gene si... | BP | 1.717e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0044257 cellular protein catabolic process | BP | 1.723e-02 | HSP60-2 BUB3.2 AT5G67630 NYC1 UBQ11 AT1G72020 UKL5 AT2G20360 AT2G46520 ATGSTU3 |
| GO:0009561 megagametogenesis | BP | 1.739e-02 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0044265 cellular macromolecule catabolic process | BP | 1.795e-02 | HSP60-2 BUB3.2 AT5G67630 NYC1 AT4G10070 UBQ11 AT1G72020 UKL5 AtXRN3 AT2G20360 AT2G46520 ATGSTU3 |
| GO:0044728 DNA methylation or demethylation | BP | 1.811e-02 | ATCAP-C ATK1 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0007267 cell-cell signaling | BP | 1.840e-02 | ATGSL12 ARP4 ARF1 RALFL14 |
| GO:0006304 DNA modification | BP | 1.884e-02 | ATCAP-C ATK1 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0009790 embryo development | BP | 1.958e-02 | FCA A/N-InvE emb2735 ATSUFE AT3G15670 TCTP AT1G80620 ATBS1 ARP4 LEA7 ATRPA1A AT2G46140 |
| GO:0007276 gamete generation | BP | 2.037e-02 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0010498 proteasomal protein catabolic process | BP | 2.037e-02 | HSP60-2 BUB3.2 AT5G67630 UKL5 AT2G46520 ATGSTU3 |
| GO:0035195 gene silencing by miRNA | BP | 2.077e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0051052 regulation of DNA metabolic process | BP | 2.117e-02 | ATCAP-C ATK1 AT1G05440 AtXRN3 ATRPA1A EMB2795 |
| GO:0030163 protein catabolic process | BP | 2.156e-02 | HSP60-2 BUB3.2 AT5G67630 NYC1 UBQ11 AT1G72020 UKL5 AT2G20360 AT2G46520 ATGSTU3 |
| GO:0006312 mitotic recombination | BP | 2.172e-02 | AT3G12340 ARP4 ATRPA1A |
| GO:0030422 production of siRNA involved in RNA inte... | BP | 2.174e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0031050 dsRNA fragmentation | BP | 2.275e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0043331 response to dsRNA | BP | 2.275e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0070918 production of small RNA involved in gene... | BP | 2.275e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0071359 cellular response to dsRNA | BP | 2.275e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0006270 DNA replication initiation | BP | 2.357e-02 | ATCAP-C AT1G05440 EMB2795 |
| GO:0048831 regulation of shoot system development | BP | 2.358e-02 | FCA ATCAP-C ARR10 ATK1 AT1G52930 AT1G05440 ARP4 ATRPA1A EMB2795 |
| GO:0000413 protein peptidyl-prolyl isomerization | BP | 2.392e-02 | FKBP16-2 AT3G12340 |
| GO:0006839 mitochondrial transport | BP | 2.484e-02 | AT5G38720 AT3G55640 AT3G20240 UCP3 LSM8 |
| GO:0009892 negative regulation of metabolic process | BP | 2.845e-02 | FCA ATCAP-C ATGSL12 AT5G11940 ATK1 AtPFA-DSP4 MOM AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0051321 meiotic cell cycle | BP | 2.942e-02 | FCA ATCAP-C ATGSL12 ATK1 ARP4 AtXRN3 ATRPA1A |
| GO:0044248 cellular catabolic process | BP | 3.024e-02 | HSP60-2 BUB3.2 AER AT5G67630 ARA8 AT5G39940 A/N-InvE ATSUFE ATWRKY28 NYC1 AT4G10070 UBQ11 AT1G72020 ABCE1 UKL5 AT1G02360 ATGA2OX2 AtXRN3 AT1G22800 AT2G20360 AT2G46520 UGT73B4 ATGSTU3 |
| GO:0010605 negative regulation of macromolecule met... | BP | 3.057e-02 | FCA ATCAP-C ATGSL12 ATK1 AtPFA-DSP4 MOM AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0051603 proteolysis involved in cellular protein... | BP | 3.095e-02 | HSP60-2 BUB3.2 AT5G67630 UBQ11 AT1G72020 UKL5 AT2G20360 AT2G46520 ATGSTU3 |
| GO:0007126 meiotic nuclear division | BP | 3.137e-02 | FCA ATCAP-C ATK1 ARP4 AtXRN3 ATRPA1A |
| GO:0000280 nuclear division | BP | 3.307e-02 | FCA ATCAP-C ATK1 TCTP ARP4 AtXRN3 ATRPA1A |
| GO:0051607 defense response to virus | BP | 3.312e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0048523 negative regulation of cellular process | BP | 3.354e-02 | FCA ATCAP-C ATGSL12 ATK1 AtPFA-DSP4 FMA ANAC055 MOM AT1G05440 ARP4 ARF1 AtXRN3 HDG2 EMB2795 |
| GO:0009057 macromolecule catabolic process | BP | 3.422e-02 | HSP60-2 BUB3.2 AT5G67630 NYC1 AT4G10070 UBQ11 AT1G72020 UKL5 AtXRN3 AT2G20360 AT2G46520 ATGSTU3 |
| GO:2000241 regulation of reproductive process | BP | 3.478e-02 | FCA ATCAP-C ARR10 ATK1 AT1G52930 AT1G05440 ARP4 ATRPA1A EMB2795 |
| GO:0009909 regulation of flower development | BP | 3.859e-02 | FCA ATCAP-C ATK1 AT1G52930 AT1G05440 ARP4 ATRPA1A EMB2795 |
| GO:0010629 negative regulation of gene expression | BP | 3.894e-02 | FCA ATCAP-C ATGSL12 ATK1 MOM AT1G05440 ARP4 ARF1 AtXRN3 SMC3 EMB2795 |
| GO:0048232 male gamete generation | BP | 3.971e-02 | ARP4 ATRPA1A |
| GO:0043414 macromolecule methylation | BP | 4.121e-02 | AT5G59850 ATCAP-C AT5G14600 ATGSL12 ATK1 RACK1C AT1G52930 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0007010 cytoskeleton organization | BP | 4.248e-02 | HSP60-2 AT5G67630 ATGSL12 ATK1 UKL5 TCTP AT1G05440 AT2G46520 EMB2795 |
| GO:0009793 embryo development ending in seed dorman... | BP | 4.255e-02 | FCA A/N-InvE emb2735 ATSUFE AT3G15670 AT1G80620 ARP4 LEA7 ATRPA1A AT2G46140 |
| GO:0032259 methylation | BP | 4.356e-02 | AT5G59850 ATCAP-C AT5G14600 ATGSL12 ATK1 RACK1C AT1G52930 AT1G05440 ARP4 ARF1 EMB2795 |
| GO:0010033 response to organic substance | BP | 4.502e-02 | BUB3.2 AER ATDI8 ATTRP1 ATCAP-C ARA8 ATGSL12 ATST2A AT3G59080 DIN11 ARR10 ATWRKY28 ATCPK4 IBR1 ABCG11 AT1G72020 FMA AT3G17120 RACK1C ANAC055 TCTP AT1G02360 ATGA2OX2 ATBS1 RSL4 ARP4 ARF1 LSM8 SMC3 AT2G20360 ATRPA1A AT2G46520 UGT73B4 ATGSTU3 AT2G38250 |
| GO:0071407 cellular response to organic cyclic comp... | BP | 4.783e-02 | ATCAP-C ARA8 ATGSL12 ATCPK4 FMA ANAC055 ATBS1 ARP4 ARF1 SMC3 |
| GO:1901699 cellular response to nitrogen compound | BP | 4.927e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0006275 regulation of DNA replication | BP | 5.030e-02 | ATCAP-C ATK1 AT1G05440 EMB2795 |
| GO:0006508 proteolysis | BP | 5.060e-02 | HSP60-2 BUB3.2 AT5G67630 AT5G11940 AT3G59080 UBQ11 AT1G72020 UKL5 AT1G53530 AT2G20360 AT2G46520 scpl38 ATGSTU3 |
| GO:0008283 cell proliferation | BP | 5.120e-02 | ATCAP-C ATPSK3 TCTP AT1G05440 AT1G04200 EMB2795 |
| GO:0019953 sexual reproduction | BP | 5.120e-02 | AT5G38720 AT3G12340 AT1G80620 AT1G52930 ARP4 ATRPA1A |
| GO:0018022 peptidyl-lysine methylation | BP | 5.265e-02 | ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 EMB2795 |
| GO:0034968 histone lysine methylation | BP | 5.265e-02 | ATCAP-C ATGSL12 ATK1 AT1G05440 ARP4 EMB2795 |
| GO:0018208 peptidyl-proline modification | BP | 5.349e-02 | FKBP16-2 AT3G12340 |
| GO:0009615 response to virus | BP | 5.436e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0016246 RNA interference | BP | 5.436e-02 | ATCAP-C ATGSL12 ARP4 ARF1 SMC3 |
| GO:0000003 reproduction | BP | 5.543e-02 | FCA ATCAP-C AT5G38720 ATGSL12 ATK1 AT3G12340 AT3G15670 AT1G80620 AT1G52930 ARP4 AtXRN3 ATRPA1A |
| GO:0048285 organelle fission | BP | 5.715e-02 | FCA ATCAP-C ATK1 TCTP ARP4 AtXRN3 ATRPA1A |
| GO:0044703 multi-organism reproductive process | BP | 5.757e-02 | AT5G38720 AT3G12340 TCTP AT1G80620 AT1G52930 ARP4 AT1G11410 AT1G15330 ATRPA1A scpl38 |
| GO:0006820 anion transport | BP | 5.861e-02 | AER ATFOLT1 ATCLC-C ARA8 GTR1 ATWRKY28 ABCG11 ALDH1A AT1G02360 GLIP5 |
| GO:0007059 chromosome segregation | BP | 5.974e-02 | FCA ATCAP-C AtXRN3 SMC3 ATRPA1A |
| GO:0015711 organic anion transport | BP | 6.272e-02 | AER ATFOLT1 GTR1 ATWRKY28 ABCG11 AT1G02360 GLIP5 |
| GO:0048580 regulation of post-embryonic development | BP | 6.351e-02 | FCA ATCAP-C ARR10 ATK1 AT1G52930 AT1G05440 ARP4 ATRPA1A EMB2795 |