4.0:Analysis result:Information of module
seedling 30 min S Exp

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0050826
response to freezing
BP1.471e-02ATDCL4 MSI3 RST1 OLE3
GO:0000103
sulfate assimilation
BP1.634e-02APS3 APR2
GO:0045786
negative regulation of cell cycle
BP1.690e-02ASF1A ICK5 AT;CDKD;1
GO:0019915
lipid storage
BP2.243e-02ATDCL4 MSI3 RST1 OLE3
GO:0006508
proteolysis
BP2.564e-02AT4G15475 AT5G66960 ATUBC4 ATCTIMC VPS35C AT3G45310 AT4G22050 DER2.1 AT3G25960 scpl44 UBP11 AT1G24140 AT1G51320 AT2G07240 AT2G27630 UBC6
GO:0044257
cellular protein catabolic process
BP2.875e-02AT4G15475 ATUBC4 ATCTIMC VPS35C AT3G25960 FOLB1 UBP11 AT1G51320 AT2G27630 UBC6
GO:0009756
carbohydrate mediated signaling
BP3.069e-02ATDCL4 MSI3 RST1 OLE3
GO:0010182
sugar mediated signaling pathway
BP3.069e-02ATDCL4 MSI3 RST1 OLE3
GO:0006694
steroid biosynthetic process
BP3.275e-02APS3 SIR AT2G33630 AT1G12230 ATKCR2 SQE2
GO:0045736
negative regulation of cyclin-dependent ...
BP3.358e-02ICK5 AT;CDKD;1
GO:0048235
pollen sperm cell differentiation
BP3.358e-02MAPKKK20 ATMGH3
GO:0051235
maintenance of location
BP3.379e-02ATDCL4 MSI3 RST1 OLE3
GO:0071322
cellular response to carbohydrate stimul...
BP3.379e-02ATDCL4 MSI3 RST1 OLE3
GO:0016126
sterol biosynthetic process
BP3.468e-02APS3 SIR AT1G12230 ATKCR2 SQE2
GO:0030163
protein catabolic process
BP3.475e-02AT4G15475 ATUBC4 ATCTIMC VPS35C AT3G25960 FOLB1 UBP11 AT1G51320 AT2G27630 UBC6
GO:0016125
sterol metabolic process
BP3.869e-02APS3 SIR AT1G12230 ATKCR2 SQE2
GO:0016567
protein ubiquitination
BP4.184e-02ATDCL4 AT5G65500 MSI3 RST1 OLE3 AtPUB4
GO:0009057
macromolecule catabolic process
BP4.287e-02AT4G15475 ATUBC4 ATCTIMC VPS35C AT3G25960 FOLB1 AT3G01810 LSF1 UBP11 AT1G51320 AT2G27630 UBC6
GO:1901701
cellular response to oxygen-containing c...
BP4.411e-02ATDCL4 MAPKKK19 LTI65 AT5G38820 BG3 AT3G54510 AT3G46630 MSI3 NINJA RST1 OLE3 BZIP28 AtLEC1
GO:0051603
proteolysis involved in cellular protein...
BP4.511e-02AT4G15475 ATUBC4 ATCTIMC VPS35C AT3G25960 UBP11 AT1G51320 AT2G27630 UBC6
GO:0006511
ubiquitin-dependent protein catabolic pr...
BP4.646e-02AT4G15475 ATUBC4 ATCTIMC VPS35C UBP11 AT1G51320 AT2G27630 UBC6
GO:0008202
steroid metabolic process
BP4.961e-02APS3 SIR AT2G33630 AT1G12230 ATKCR2 SQE2
GO:0019941
modification-dependent protein catabolic...
BP5.071e-02AT4G15475 ATUBC4 ATCTIMC VPS35C UBP11 AT1G51320 AT2G27630 UBC6
GO:0043632
modification-dependent macromolecule cat...
BP5.071e-02AT4G15475 ATUBC4 ATCTIMC VPS35C UBP11 AT1G51320 AT2G27630 UBC6
GO:0048232
male gamete generation
BP5.072e-02MAPKKK20 ATMGH3
GO:0055046
microgametogenesis
BP5.072e-02MAPKKK20 ATMGH3
GO:0006334
nucleosome assembly
BP5.120e-02ATMGH3 G-H2AX HIS4
GO:0034728
nucleosome organization
BP5.120e-02ATMGH3 G-H2AX HIS4
GO:0006333
chromatin assembly or disassembly
BP5.195e-02ATMGH3 ASF1A G-H2AX HIS4
GO:1901264
carbohydrate derivative transport
BP5.540e-02GTR1 ACD11
GO:0006857
oligopeptide transport
BP5.684e-02AT5G28470 GTR1 AT3G45690
GO:0015833
peptide transport
BP5.684e-02AT5G28470 GTR1 AT3G45690
GO:0071310
cellular response to organic substance
BP5.811e-02ATERF6 EIL2 ATDCL4 MAPKKK19 LTI65 AT5G46420 AT5G38820 BG3 AT3G54510 MSI3 NINJA RST1 OLE3 BZIP28 AtLEC1 AT1G24140 ARR14
GO:0032446
protein modification by small protein co...
BP5.821e-02ATDCL4 AT5G65500 MSI3 RST1 OLE3 AtPUB4
GO:0065004
protein-DNA complex assembly
BP5.976e-02ATMGH3 G-H2AX HIS4
GO:0071824
protein-DNA complex subunit organization
BP5.976e-02ATMGH3 G-H2AX HIS4
GO:0009845
seed germination
BP6.100e-02ATDCL4 MSI3 RST1 OLE3 ARR14
GO:0006661
phosphatidylinositol biosynthetic proces...
BP6.496e-02AT5G40500 AT5G13470 AT3G52070 RTH
GO:0009414
response to water deprivation
BP6.629e-02AT5G26990 MAPKKK19 LTI65 MAPKKK20 AT3G46630 ESL1 HIS4
GO:0031497
chromatin assembly
BP7.214e-02ATMGH3 G-H2AX HIS4
GO:0090351
seedling development
BP7.240e-02ATDCL4 MSI3 RST1 OLE3 ARR14
GO:0070887
cellular response to chemical stimulus
BP7.490e-02ATERF6 EIL2 ATDCL4 MAPKKK19 LTI65 AT5G46420 AT5G38820 BG3 AT3G54510 AT3G46630 MSI3 NINJA RST1 OLE3 BZIP28 AtLEC1 AT1G24140 ARR14
GO:0009415
response to water
BP7.524e-02AT5G26990 MAPKKK19 LTI65 MAPKKK20 AT3G46630 ESL1 HIS4
GO:0009860
pollen tube growth
BP8.156e-02AT5G28470 NET2C AT3G62640 ATMGH3 ARAC4 ATCHX15
GO:0010162
seed dormancy process
BP8.208e-02ATDCL4 MSI3 RST1 OLE3
GO:0022611
dormancy process
BP8.208e-02ATDCL4 MSI3 RST1 OLE3
GO:0042886
amide transport
BP8.211e-02AT5G28470 GTR1 AT3G45690
GO:0044265
cellular macromolecule catabolic process
BP8.542e-02AT4G15475 ATUBC4 ATCTIMC VPS35C AT3G25960 FOLB1 UBP11 AT1G51320 AT2G27630 UBC6
GO:0006323
DNA packaging
BP8.556e-02ATMGH3 G-H2AX HIS4
GO:0010200
response to chitin
BP8.654e-02ATERF6 AtRLP52 BG3 AT3G10930 SKOR BZIP28 AT1G24140
GO:0006301
postreplication repair
BP9.186e-02ATUBC4 UBC6
GO:0019722
calcium-mediated signaling
BP9.186e-02AtNek7 CBL8
GO:0006469
negative regulation of protein kinase ac...
BP9.753e-02ICK5 AT;CDKD;1
GO:0033673
negative regulation of kinase activity
BP9.753e-02ICK5 AT;CDKD;1
GO:0051348
negative regulation of transferase activ...
BP9.753e-02ICK5 AT;CDKD;1
GO:0071901
negative regulation of protein serine/th...
BP9.753e-02ICK5 AT;CDKD;1
GO:0043085
positive regulation of catalytic activit...
BP9.833e-02AT5G46420 AT5G05200 AT3G56010 LSF1
GO:0010243
response to organonitrogen compound
BP1.006e-01ATERF6 AtRLP52 BG3 AT3G10930 SKOR BZIP28 AT1G24140
GO:0044093
positive regulation of molecular functio...
BP1.012e-01AT5G46420 AT5G05200 AT3G56010 LSF1
GO:0032870
cellular response to hormone stimulus
BP1.024e-01ATERF6 EIL2 MAPKKK19 LTI65 AT5G38820 BG3 AT3G54510 NINJA BZIP28 AtLEC1 ARR14
GO:0001933
negative regulation of protein phosphory...
BP1.033e-01ICK5 AT;CDKD;1
GO:0042326
negative regulation of phosphorylation
BP1.033e-01ICK5 AT;CDKD;1
GO:0000904
cell morphogenesis involved in different...
BP1.035e-01AT5G28470 NET2C AT3G62640 ATMGH3 ASF1A ARAC4 ATCHX15 ATHB-15
GO:0007015
actin filament organization
BP1.041e-01STY46 ARAC4 ATHB-15 PRF5
GO:0071495
cellular response to endogenous stimulus
BP1.079e-01ATERF6 EIL2 MAPKKK19 LTI65 AT5G38820 BG3 AT3G54510 NINJA BZIP28 AtLEC1 ARR14
GO:0010563
negative regulation of phosphorus metabo...
BP1.091e-01ICK5 AT;CDKD;1
GO:0045936
negative regulation of phosphate metabol...
BP1.091e-01ICK5 AT;CDKD;1
GO:0031400
negative regulation of protein modificat...
BP1.151e-01ICK5 AT;CDKD;1
GO:1990267
response to transition metal nanoparticl...
BP1.192e-01AT5G38820 ATCTIMC ATWRKY61
GO:0035556
intracellular signal transduction
BP1.198e-01ATERF6 EIL2 MAPKKK19 BG3 AtNek7 ARFC1 BZIP28 ARAC4 CBL8 ARR14
GO:1901700
response to oxygen-containing compound
BP1.201e-01ATERF6 ATDCL4 AT5G26990 AtRLP52 MAPKKK19 AtHGO LTI65 AT5G38820 BG3 AT3G54510 MAPKKK20 AT3G46630 MSI3 NINJA AT3G10930 RST1 OLE3 SKOR BZIP28 AT1G73980 AtLEC1 ESL1 AT1G24140 HSP70T-2 TPS10 HIS4 ACD11
GO:0016052
carbohydrate catabolic process
BP1.204e-01SIR ATCTIMC AT3G25960 AT3G01810 LSF1 AT1G12230
GO:0009612
response to mechanical stimulus
BP1.211e-01AtNek7 AT3G10930
GO:0009686
gibberellin biosynthetic process
BP1.211e-01AT3G54510 ATGA20OX4
GO:0016102
diterpenoid biosynthetic process
BP1.272e-01AT3G54510 ATGA20OX4
GO:0007165
signal transduction
BP1.280e-01ATERF6 EIL2 ATDCL4 AtRLP52 MAPKKK19 LTI65 AT5G47440 BG3 AT3G54510 MSI3 NINJA AtNek7 ARFC1 RST1 OLE3 BZIP28 AtLEC1 CLE9 ARAC4 CBL8 AT1G24140 ARR14
GO:0010431
seed maturation
BP1.284e-01ATDCL4 MSI3 RST1 OLE3
GO:0015980
energy derivation by oxidation of organi...
BP1.314e-01AT5G54980 ATCTIMC AT1G12230
GO:0048868
pollen tube development
BP1.319e-01AT5G28470 NET2C AT3G62640 ATMGH3 ARAC4 ATCHX15
GO:0045229
external encapsulating structure organiz...
BP1.328e-01NET2C AT3G62640 AT3G60730 ATMGH3 AT3G01810 ACOS5 ARAC4 ATCHX15 LAP6 ATHB-15
GO:0000272
polysaccharide catabolic process
BP1.333e-01AT3G01810 LSF1
GO:0010043
response to zinc ion
BP1.333e-01ATCTIMC ATWRKY61
GO:0010584
pollen exine formation
BP1.333e-01ACOS5 LAP6
GO:0030036
actin cytoskeleton organization
BP1.349e-01STY46 ARAC4 ATHB-15 PRF5
GO:0008610
lipid biosynthetic process
BP1.356e-01APS3 AT5G40500 AT5G13470 SIR AT3G56010 AT3G54510 AT3G52070 RTH AT4G31050 AT2G33630 ATGA20OX4 AtLEC1 AT1G12230 ATKCR2 TPS10 SQE2 AT2G19320
GO:0009933
meristem structural organization
BP1.367e-01ATDCL4 MSI3 RST1 OLE3 ATHB-15
GO:0009755
hormone-mediated signaling pathway
BP1.378e-01ATERF6 EIL2 MAPKKK19 LTI65 BG3 AT3G54510 NINJA BZIP28 AtLEC1 ARR14
GO:0010208
pollen wall assembly
BP1.396e-01ACOS5 LAP6
GO:0010927
cellular component assembly involved in ...
BP1.396e-01ACOS5 LAP6
GO:0019932
second-messenger-mediated signaling
BP1.396e-01AtNek7 CBL8
GO:0085029
extracellular matrix assembly
BP1.396e-01ACOS5 LAP6
GO:0046488
phosphatidylinositol metabolic process
BP1.448e-01AT5G40500 AT5G13470 AT3G52070 RTH
GO:0048532
anatomical structure arrangement
BP1.450e-01ATDCL4 MSI3 RST1 OLE3 ATHB-15
GO:0000079
regulation of cyclin-dependent protein s...
BP1.459e-01ICK5 AT;CDKD;1
GO:0009685
gibberellin metabolic process
BP1.459e-01AT3G54510 ATGA20OX4
GO:0009409
response to cold
BP1.460e-01ATDCL4 LTI65 SIR BG3 MAPKKK20 MSI3 RST1 OLE3 BZIP28
GO:0010440
stomatal lineage progression
BP1.522e-01ICK5 AT;CDKD;1
GO:0016101
diterpenoid metabolic process
BP1.522e-01AT3G54510 ATGA20OX4
GO:0009108
coenzyme biosynthetic process
BP1.584e-01AT5G53920 AT4G31050 ACOS5 ATCOAE
GO:0050790
regulation of catalytic activity
BP1.591e-01AT5G46420 AT5G05200 AT3G56010 ICK5 LSF1 AT;CDKD;1