ATMG00890 : ORF106D
Query Information
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AGICode ATMG00890
Description hypothetical protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATMG00890 hypothetical protein ORF106D 1 0.33 -0.31
2 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 0.63 0.32 -0.31
3 AT4G26150 cytokinin-responsive gata factor 1 cytokinin-responsive gata factor
1, GATA TRANSCRIPTION FACTOR 22,
GNC-LIKE		 -0.61 0.32 -0.3
4 AT1G33060 NAC 014 NAC 014, NAC 014 -0.59 0.32 -0.32
5 AT2G06700 transposable element gene 0.58 0.32 -0.33
6 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 0.58 0.31 -0.29
7 AT2G25140 casein lytic proteinase B4 CASEIN LYTIC PROTEINASE B-M,
casein lytic proteinase B4, HEAT
SHOCK PROTEIN 98.7		 0.57 0.31 -0.3
8 AT1G61290 syntaxin of plants 124 ATSYP124, syntaxin of plants 124 0.56 0.33 -0.3
9 AT2G43280 Far-red impaired responsive (FAR1) family protein -0.56 0.32 -0.32
10 AT1G11040 HSP40/DnaJ peptide-binding protein -0.56 0.31 -0.32
11 AT3G53300 cytochrome P450, family 71, subfamily B, polypeptide 31 cytochrome P450, family 71,
subfamily B, polypeptide 31		 0.56 0.29 -0.32
12 AT5G46520 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.32 -0.29
13 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.55 0.3 -0.33
14 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 0.55 0.3 -0.31
15 AT5G51680 hydroxyproline-rich glycoprotein family protein 0.54 0.31 -0.3
16 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.54 0.32 -0.3
17 AT5G50410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.33 -0.3
18 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 0.54 0.31 -0.31
19 AT5G61360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits
to 20 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.54 0.32 -0.3
20 AT5G43410 Integrase-type DNA-binding superfamily protein 0.54 0.32 -0.31
21 AT2G12990 transposable element gene 0.54 0.31 -0.3
22 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.33 -0.31
23 AT5G59030 copper transporter 1 copper transporter 1 -0.54 0.32 -0.33
24 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 0.54 0.32 -0.32
25 AT5G54640 Histone superfamily protein ATHTA1, histone H2A 1, RESISTANT
TO AGROBACTERIUM TRANSFORMATION 5		 -0.53 0.31 -0.33
26 AT3G60880 dihydrodipicolinate synthase 1 DIHYDRODIPICOLINATE SYNTHASE,
dihydrodipicolinate synthase 1		 -0.53 0.31 -0.34
27 AT5G25190 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 3 -0.53 0.32 -0.31
28 AT5G07850 HXXXD-type acyl-transferase family protein 0.53 0.33 -0.29
29 AT1G72140 Major facilitator superfamily protein 0.53 0.3 -0.33
30 AT2G16960 ARM repeat superfamily protein 0.52 0.31 -0.32
31 AT4G01890 Pectin lyase-like superfamily protein 0.52 0.32 -0.32
32 AT1G53980 Ubiquitin-like superfamily protein 0.51 0.31 -0.31
33 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 0.51 0.29 -0.32
34 AT4G22110 GroES-like zinc-binding dehydrogenase family protein 0.51 0.3 -0.31
35 AT5G50140 Ankyrin repeat family protein 0.51 0.34 -0.32
36 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein -0.51 0.33 -0.31
37 AT2G40580 Protein kinase superfamily protein -0.51 0.31 -0.31
38 AT2G14380 transposable element gene -0.51 0.33 -0.32
39 AT5G19090 Heavy metal transport/detoxification superfamily protein -0.51 0.3 -0.34
40 AT4G38480 Transducin/WD40 repeat-like superfamily protein -0.51 0.31 -0.32
41 AT1G31470 Major facilitator superfamily protein NUCLEAR FUSION DEFECTIVE 4 0.5 0.34 -0.33
42 AT4G11210 Disease resistance-responsive (dirigent-like protein)
family protein		 0.5 0.35 -0.32
43 AT4G07480 transposable element gene -0.5 0.31 -0.33
44 AT2G04660 anaphase-promoting complex/cyclosome 2 anaphase-promoting
complex/cyclosome 2		 0.5 0.32 -0.3
45 AT2G45780 other RNA 0.5 0.33 -0.31
46 AT4G03710 transposable element gene -0.5 0.34 -0.28
47 AT1G61210 Transducin/WD40 repeat-like superfamily protein DWD hypersensitive to ABA 3 0.49 0.32 -0.31
48 AT3G31380 transposable element gene 0.49 0.34 -0.3
49 AT3G03400 EF hand calcium-binding protein family -0.49 0.32 -0.32
50 AT1G06700 Protein kinase superfamily protein -0.49 0.33 -0.32
51 AT1G02680 TBP-associated factor 13 TBP-associated factor 13 -0.48 0.31 -0.31
52 AT3G43950 Protein kinase superfamily protein -0.48 0.35 -0.3
53 AT4G01910 Cysteine/Histidine-rich C1 domain family protein 0.48 0.32 -0.33
54 AT5G06500 AGAMOUS-like 96 AGAMOUS-like 96 -0.47 0.32 -0.3
55 AT3G45530 Cysteine/Histidine-rich C1 domain family protein 0.47 0.32 -0.32
56 AT3G57210 Protein of unknown function (DUF626) -0.47 0.33 -0.3
57 AT1G43930 transposable element gene 0.47 0.3 -0.3
58 AT1G06070 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.47 0.33 -0.31
59 AT5G03590 GDSL-like Lipase/Acylhydrolase superfamily protein -0.47 0.33 -0.31
60 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein -0.47 0.3 -0.31
61 AT3G20700 F-box associated ubiquitination effector family protein 0.47 0.31 -0.32
62 AT2G34820 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.46 0.31 -0.34
63 AT2G16670 transposable element gene -0.46 0.34 -0.33
64 AT2G02061 Nucleotide-diphospho-sugar transferase family protein -0.45 0.32 -0.32
65 AT2G20720 Pentatricopeptide repeat (PPR) superfamily protein -0.45 0.32 -0.33
66 AT1G04540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.45 0.32 -0.32
67 AT3G08000 RNA-binding (RRM/RBD/RNP motifs) family protein -0.44 0.29 -0.35
68 AT4G11870 unknown protein; Has 98 Blast hits to 93 proteins in 36
species: Archae - 2; Bacteria - 26; Metazoa - 15; Fungi -
20; Plants - 2; Viruses - 0; Other Eukaryotes - 33 (source:
NCBI BLink).		 -0.44 0.32 -0.33
69 AT5G22875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.44 0.3 -0.33
70 AT3G53910 malate dehydrogenase-related -0.44 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
71 C0172 MST_2214.3 - - - -0.75 0.45 -0.45
72 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.71 0.42 -0.44
73 C0198 Phosphatidylethanolamine-34:0 - - - 0.71 0.45 -0.47
74 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.69 0.43 -0.45 C0027
75 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.69 0.46 -0.4 C0087
76 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.66 0.46 -0.46 C0262
77 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.66 0.41 -0.43 C0030
78 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.66 0.44 -0.43 C0261
79 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.65 0.44 -0.46 C0088
80 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.63 0.46 -0.45 C0053
81 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		0.62 0.32 -0.33 C0052
82 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		0.53 0.33 -0.3 C0066
83 C0113 Histidinol - Histidinol histidine biosynthesis 0.51 0.32 -0.32 C0113