AT2G41650 : -
Query Information
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AGICode AT2G41650
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G41650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.32 -0.32
2 AT3G18930 RING/U-box superfamily protein -0.66 0.31 -0.31
3 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.64 0.31 -0.32
4 AT2G36490 demeter-like 1 demeter-like 1, REPRESSOR OF
SILENCING1		 0.61 0.31 -0.3
5 AT1G33840 Protein of unknown function (DUF567) -0.59 0.31 -0.3
6 AT2G05920 Subtilase family protein 0.59 0.31 -0.3
7 AT3G52170 DNA binding 0.58 0.32 -0.3
8 AT5G03860 malate synthase malate synthase 0.58 0.32 -0.32
9 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 -0.58 0.31 -0.31
10 AT3G16750 unknown protein; Has 4708 Blast hits to 1416 proteins in
195 species: Archae - 36; Bacteria - 1240; Metazoa - 1232;
Fungi - 406; Plants - 191; Viruses - 23; Other Eukaryotes -
1580 (source: NCBI BLink).		 -0.58 0.33 -0.32
11 AT5G60470 C2H2 and C2HC zinc fingers superfamily protein -0.57 0.34 -0.32
12 AT1G34290 receptor like protein 5 receptor like protein 5, receptor
like protein 5		 -0.57 0.28 -0.29
13 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.57 0.33 -0.31
14 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 0.57 0.3 -0.32
15 AT5G41440 RING/U-box superfamily protein -0.57 0.32 -0.31
16 AT2G47760 asparagine-linked glycosylation 3 asparagine-linked glycosylation 3,
Arabidopsis thaliana
asparagine-linked glycosylation 3		 -0.56 0.31 -0.3
17 AT2G16960 ARM repeat superfamily protein -0.55 0.32 -0.3
18 AT1G54920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.33 -0.3
19 AT5G66060 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.55 0.33 -0.32
20 AT2G18490 C2H2-like zinc finger protein 0.54 0.32 -0.33
21 AT4G00780 TRAF-like family protein -0.54 0.32 -0.31
22 AT1G05030 Major facilitator superfamily protein -0.54 0.3 -0.32
23 AT5G55680 glycine-rich protein 0.54 0.3 -0.29
24 AT5G60120 target of early activation tagged (EAT) 2 target of early activation tagged
(EAT) 2		 0.54 0.31 -0.32
25 AT1G14950 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.53 0.32 -0.34
26 AT1G23380 KNOTTED1-like homeobox gene 6 KNOTTED1-like homeobox gene 6,
KNAT6L, KNAT6S		 0.53 0.33 -0.3
27 AT1G11400 partner of Y14-MAGO partner of Y14-MAGO 0.53 0.34 -0.31
28 AT5G14380 arabinogalactan protein 6 arabinogalactan protein 6 -0.53 0.31 -0.3
29 AT5G25920 BEST Arabidopsis thaliana protein match is: Eukaryotic
aspartyl protease family protein (TAIR:AT3G29750.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.52 0.31 -0.33
30 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.31 -0.32
31 AT4G15210 beta-amylase 5 AT-BETA-AMY, ARABIDOPSIS THALIANA
BETA-AMYLASE, beta-amylase 5,
BMY1, REDUCED BETA AMYLASE 1		 -0.52 0.33 -0.32
32 AT4G14070 acyl-activating enzyme 15 acyl-activating enzyme 15 -0.52 0.31 -0.32
33 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 0.52 0.31 -0.31
34 AT4G37820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast
hits to 177005 proteins in 4263 species: Archae - 2016;
Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants -
22011; Viruses - 2192; Other Eukaryotes - 132022 (source:
NCBI BLink).		 -0.52 0.31 -0.31
35 AT5G57140 purple acid phosphatase 28 PURPLE ACID PHOSPHATASE 28, purple
acid phosphatase 28		 -0.52 0.31 -0.34
36 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.51 0.31 -0.32
37 AT4G21100 damaged DNA binding protein 1B damaged DNA binding protein 1B -0.51 0.31 -0.32
38 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 0.51 0.32 -0.33
39 AT3G02860 zinc ion binding -0.51 0.29 -0.29
40 AT5G30450 transposable element gene -0.51 0.31 -0.32
41 AT1G60090 beta glucosidase 4 beta glucosidase 4 0.5 0.33 -0.31
42 AT1G25570 Di-glucose binding protein with Leucine-rich repeat domain -0.5 0.29 -0.31
43 AT2G15010 Plant thionin 0.49 0.35 -0.3
44 AT1G42220 transposable element gene -0.49 0.32 -0.35
45 AT3G30290 cytochrome P450, family 702, subfamily A, polypeptide 8 cytochrome P450, family 702,
subfamily A, polypeptide 8		 -0.49 0.31 -0.32
46 AT3G47250 Plant protein of unknown function (DUF247) -0.49 0.33 -0.35
47 AT1G67820 Protein phosphatase 2C family protein 0.49 0.31 -0.33
48 AT3G02440 TRICHOME BIREFRINGENCE-LIKE 20 TRICHOME BIREFRINGENCE-LIKE 20 0.48 0.32 -0.32
49 AT5G10850 transposable element gene 0.48 0.3 -0.31
50 AT2G45840 Arabidopsis thaliana protein of unknown function (DUF821) -0.47 0.32 -0.32
51 AT5G18750 DNAJ heat shock N-terminal domain-containing protein 0.47 0.31 -0.31
52 AT3G42300 transposable element gene -0.47 0.32 -0.31
53 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B -0.47 0.32 -0.29
54 AT1G43780 serine carboxypeptidase-like 44 serine carboxypeptidase-like 44 -0.47 0.29 -0.31
55 AT1G06020 pfkB-like carbohydrate kinase family protein -0.47 0.29 -0.3
56 AT1G53980 Ubiquitin-like superfamily protein -0.46 0.31 -0.32
57 AT1G67600 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.46 0.31 -0.32
58 AT5G22820 ARM repeat superfamily protein 0.46 0.33 -0.32
59 AT5G61090 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.46 0.35 -0.33
60 AT4G29650 Cytidine/deoxycytidylate deaminase family protein -0.46 0.32 -0.31
61 AT3G25020 receptor like protein 42 receptor like protein 42, receptor
like protein 42		 -0.46 0.31 -0.3
62 AT2G17050 disease resistance protein (TIR-NBS-LRR class), putative -0.46 0.32 -0.33
63 AT4G20250 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.45 0.32 -0.3
64 AT4G17880 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 -0.45 0.33 -0.3
65 AT2G16690 transposable element gene -0.45 0.31 -0.32
66 AT3G28345 ABC transporter family protein ATP-binding cassette B15,
multi-drug resistance 13		 0.45 0.29 -0.34
67 AT4G15880 Cysteine proteinases superfamily protein ATESD4, EARLY IN SHORT DAYS 4 -0.45 0.31 -0.32
68 AT2G31080 transposable element gene 0.45 0.34 -0.28
69 AT5G50790 Nodulin MtN3 family protein AtSWEET10, SWEET10 -0.45 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0086 Disinapylspermidine - - - 0.83 0.46 -0.44
71 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.82 0.45 -0.45 C0012
72 C0213 PR_MST_2410.2 - - - 0.81 0.44 -0.45
73 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.75 0.44 -0.44 C0001
74 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.73 0.42 -0.48 C0262
75 C0214 PR_MST_2412.1 - - - 0.73 0.45 -0.44
76 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.7 0.47 -0.44 C0195
77 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.69 0.47 -0.42 C0088
78 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.67 0.46 -0.45 C0144
79 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.65 0.43 -0.44 C0261
80 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.63 0.43 -0.43 C0027
81 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.6 0.46 -0.46 C0186
82 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis 		0.56 0.28 -0.32 C0139
83 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		-0.54 0.29 -0.3 C0061
84 C0068 Citric acid - Citrate acetyl-CoA biosynthesis (from citrate),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.52 0.3 -0.32 C0068