AT4G16750 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G16750
Description Integrase-type DNA-binding superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G16750 Integrase-type DNA-binding superfamily protein 1 0.3 -0.31
2 AT3G19620 Glycosyl hydrolase family protein 0.78 0.31 -0.32
3 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.76 0.29 -0.32
4 AT4G26490 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.76 0.33 -0.3
5 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 -0.74 0.32 -0.31
6 AT1G80720 Mitochondrial glycoprotein family protein -0.74 0.31 -0.33
7 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein 0.74 0.29 -0.31
8 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 0.73 0.31 -0.31
9 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.73 0.31 -0.3
10 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.73 0.31 -0.33
11 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 0.72 0.32 -0.32
12 AT5G12840 nuclear factor Y, subunit A1 ATHAP2A, EMBRYO DEFECTIVE 2220,
HAP2A, nuclear factor Y, subunit
A1		 0.72 0.31 -0.33
13 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.72 0.33 -0.31
14 AT4G36880 cysteine proteinase1 cysteine proteinase1 -0.72 0.32 -0.32
15 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 -0.72 0.3 -0.32
16 AT2G41870 Remorin family protein 0.72 0.33 -0.32
17 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 0.72 0.33 -0.34
18 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 -0.72 0.32 -0.33
19 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A 0.72 0.32 -0.3
20 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 -0.72 0.3 -0.29
21 AT1G73390 Endosomal targeting BRO1-like domain-containing protein 0.71 0.33 -0.33
22 AT1G14060 GCK domain-containing protein -0.71 0.33 -0.33
23 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A -0.71 0.33 -0.3
24 AT3G16480 mitochondrial processing peptidase alpha subunit mitochondrial processing peptidase
alpha subunit		 -0.71 0.3 -0.31
25 AT2G44790 uclacyanin 2 uclacyanin 2 -0.71 0.32 -0.31
26 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 -0.71 0.32 -0.32
27 AT3G07590 Small nuclear ribonucleoprotein family protein -0.71 0.34 -0.29
28 AT1G56600 galactinol synthase 2 galactinol synthase 2, galactinol
synthase 2		 0.7 0.31 -0.33
29 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.7 0.32 -0.32
30 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.7 0.33 -0.3
31 AT3G56050 Protein kinase family protein 0.7 0.33 -0.3
32 AT1G59940 response regulator 3 response regulator 3 -0.7 0.33 -0.31
33 AT3G02190 Ribosomal protein L39 family protein -0.7 0.34 -0.31
34 AT5G14510 ARM repeat superfamily protein 0.7 0.31 -0.33
35 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 -0.7 0.32 -0.32
36 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 0.69 0.31 -0.31
37 AT2G44270 repressor of lrx1 repressor of lrx1 -0.69 0.31 -0.33
38 AT5G51890 Peroxidase superfamily protein 0.69 0.31 -0.31
39 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 0.69 0.3 -0.32
40 AT1G73170 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.3 -0.34
41 AT3G01790 Ribosomal protein L13 family protein -0.69 0.3 -0.32
42 AT2G29530 Tim10/DDP family zinc finger protein TIM10 -0.68 0.29 -0.33
43 AT2G37130 Peroxidase superfamily protein -0.68 0.3 -0.29
44 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.68 0.31 -0.32
45 AT3G52450 plant U-box 22 plant U-box 22 -0.68 0.3 -0.31
46 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 0.68 0.32 -0.32
47 AT3G55605 Mitochondrial glycoprotein family protein -0.68 0.33 -0.31
48 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.68 0.32 -0.29
49 AT2G20940 Protein of unknown function (DUF1279) -0.67 0.32 -0.3
50 AT5G49990 Xanthine/uracil permease family protein 0.67 0.32 -0.33
51 AT2G44120 Ribosomal protein L30/L7 family protein -0.67 0.31 -0.31
52 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 0.67 0.3 -0.31
53 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 -0.67 0.31 -0.31
54 AT4G03200 catalytics 0.67 0.31 -0.31
55 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 -0.67 0.32 -0.31
56 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 0.67 0.31 -0.3
57 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.67 0.31 -0.32
58 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 0.67 0.3 -0.3
59 AT3G10090 Nucleic acid-binding, OB-fold-like protein -0.67 0.31 -0.31
60 AT1G63710 cytochrome P450, family 86, subfamily A, polypeptide 7 cytochrome P450, family 86,
subfamily A, polypeptide 7		 0.67 0.32 -0.3
61 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.67 0.34 -0.32
62 AT1G18810 phytochrome kinase substrate-related 0.67 0.33 -0.31
63 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 0.66 0.31 -0.31
64 AT1G08930 Major facilitator superfamily protein EARLY RESPONSE TO DEHYDRATION 6 -0.66 0.33 -0.31
65 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 0.66 0.32 -0.32
66 AT4G11290 Peroxidase superfamily protein -0.66 0.31 -0.32
67 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 -0.66 0.3 -0.33
68 AT4G15390 HXXXD-type acyl-transferase family protein -0.66 0.29 -0.3
69 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.31 -0.31
70 AT2G19385 zinc ion binding -0.66 0.31 -0.34
71 AT5G26110 Protein kinase superfamily protein -0.66 0.31 -0.28
72 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 0.66 0.33 -0.32
73 AT2G39450 Cation efflux family protein ATMTP11, MTP11 0.66 0.3 -0.31
74 AT3G57540 Remorin family protein 0.65 0.36 -0.31
75 AT2G40420 Transmembrane amino acid transporter family protein 0.65 0.31 -0.32
76 AT5G09270 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.32 -0.32
77 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 -0.65 0.31 -0.35
78 AT1G55460 DNA/RNA-binding protein Kin17, conserved region 0.65 0.32 -0.28
79 AT5G23750 Remorin family protein 0.65 0.31 -0.3
80 AT2G28190 copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase
2, COPPER/ZINC SUPEROXIDE
DISMUTASE 2		 -0.65 0.3 -0.33
81 AT1G64690 branchless trichome BRANCHLESS TRICHOMES 0.65 0.32 -0.31
82 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 -0.65 0.31 -0.34
83 AT2G20770 GCR2-like 2 GCR2-like 2 0.65 0.31 -0.3
84 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 0.65 0.31 -0.32
85 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.65 0.32 -0.31
86 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 0.65 0.34 -0.3
87 AT5G39580 Peroxidase superfamily protein -0.64 0.33 -0.34
88 AT1G14300 ARM repeat superfamily protein -0.64 0.32 -0.31
89 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.64 0.33 -0.33
90 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 -0.64 0.32 -0.31
91 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 0.64 0.33 -0.3
92 AT5G02050 Mitochondrial glycoprotein family protein -0.64 0.3 -0.31
93 AT5G06570 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.3
94 AT4G08460 Protein of unknown function (DUF1644) -0.64 0.3 -0.31
95 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 0.63 0.31 -0.32
96 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 -0.63 0.33 -0.31
97 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 0.63 0.32 -0.32
98 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.63 0.34 -0.3
99 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.32 -0.31
100 AT3G20430 CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA
export protein, RNA-binding domain (InterPro:IPR019385);
Has 110 Blast hits to 110 proteins in 51 species: Archae -
0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).		 -0.63 0.3 -0.32
101 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 -0.63 0.33 -0.32
102 AT4G24830 arginosuccinate synthase family -0.63 0.29 -0.3
103 AT4G17695 Homeodomain-like superfamily protein KANADI 3 0.63 0.33 -0.32
104 AT3G62020 germin-like protein 10 germin-like protein 10 0.63 0.31 -0.33
105 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.63 0.31 -0.31
106 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.63 0.31 -0.31
107 AT1G68470 Exostosin family protein 0.63 0.29 -0.32
108 AT5G25280 serine-rich protein-related 0.63 0.29 -0.34
109 AT2G15042 Leucine-rich repeat (LRR) family protein 0.62 0.34 -0.31
110 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 0.62 0.33 -0.31
111 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.62 0.31 -0.34
112 AT3G21080 ABC transporter-related -0.62 0.32 -0.33
113 AT1G27050 homeobox protein 54 -0.62 0.3 -0.31
114 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.62 0.32 -0.31
115 AT3G48570 secE/sec61-gamma protein transport protein -0.62 0.3 -0.29
116 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 0.62 0.32 -0.31
117 AT5G44670 Domain of unknown function (DUF23) 0.62 0.31 -0.31
118 AT5G53770 Nucleotidyltransferase family protein -0.61 0.34 -0.31
119 AT1G01600 cytochrome P450, family 86, subfamily A, polypeptide 4 cytochrome P450, family 86,
subfamily A, polypeptide 4		 0.61 0.31 -0.31
120 AT5G60530 late embryogenesis abundant protein-related / LEA
protein-related		 -0.61 0.33 -0.3
121 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily
protein		 -0.61 0.32 -0.33
122 AT4G21650 Subtilase family protein 0.61 0.33 -0.32
123 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 0.61 0.33 -0.32
124 AT5G09380 RNA polymerase III RPC4 -0.61 0.3 -0.31
125 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 -0.61 0.33 -0.31
126 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0266 Xylose D-Xylose D-Xylose xylose degradation I 0.84 0.44 -0.45 C0266
128 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		0.78 0.45 -0.46 C0123
129 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		0.74 0.43 -0.47 C0057
130 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.73 0.45 -0.47 C0056