AT5G28270 : -
Query Information
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AGICode AT5G28270
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28270 transposable element gene 1 0.3 -0.32
2 AT5G08090 unknown protein; Has 13 Blast hits to 13 proteins in 8
species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.3 -0.3
3 AT2G15740 C2H2-like zinc finger protein 0.59 0.31 -0.33
4 AT3G04410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.55 0.32 -0.33
5 AT1G75400 RING/U-box superfamily protein -0.54 0.3 -0.31
6 AT5G01560 lectin receptor kinase a4.3 lectin receptor kinase a4.3 0.54 0.31 -0.31
7 AT1G14260 RING/FYVE/PHD zinc finger superfamily protein 0.54 0.32 -0.33
8 AT5G35600 histone deacetylase7 histone deacetylase7 0.53 0.31 -0.34
9 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.3 -0.32
10 AT3G42480 transposable element gene 0.53 0.31 -0.31
11 AT5G17320 homeodomain GLABROUS 9 homeodomain GLABROUS 9 0.53 0.32 -0.33
12 AT5G23320 homolog of yeast STE14 A ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE A,
LPHA-CARBOXYL METHYLTRANSFERASE,
ATSTE14, homolog of yeast STE14 A,
ISOPRENYL CYSTEINE
METHYLTRANSFERASE A, STE14,
homolog of yeast STE14 A		 -0.52 0.32 -0.33
13 AT4G01575 serine protease inhibitor, Kazal-type family protein 0.51 0.32 -0.3
14 AT2G02270 pseudogene, F-box protein (SKP1 interacting partner
3-related), contains similarity to SKP1 interacting partner
3 GI:10716951 from (Arabidopsis thaliana); blastp match of
37% identity and 4.7e-33 P-value to
GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza
sativa (japonica cultivar-group)}		 ATPP2-B3 -0.5 0.32 -0.3
15 AT5G32600 transposable element gene 0.49 0.29 -0.32
16 AT4G22020 pseudogene, hypothetical protein, similar to
uncharacterized glycine-rich protein (GI:7269047)
{Arabidopsis thaliana}		 0.49 0.33 -0.32
17 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 0.48 0.32 -0.32
18 AT4G19730 Glycosyl hydrolase superfamily protein 0.48 0.31 -0.33
19 AT1G24110 Peroxidase superfamily protein 0.48 0.33 -0.3
20 AT4G23080 Protein of Unknown Function (DUF239) 0.48 0.34 -0.31
21 AT3G31403 transposable element gene 0.47 0.32 -0.33
22 AT2G07230 transposable element gene -0.47 0.31 -0.33
23 AT4G35870 early-responsive to dehydration stress protein (ERD4) 0.47 0.32 -0.31
24 AT3G13770 Pentatricopeptide repeat (PPR) superfamily protein 0.47 0.31 -0.32
25 AT3G22340 transposable element gene 0.47 0.31 -0.32
26 AT3G30820 Arabidopsis retrotransposon ORF-1 protein 0.47 0.33 -0.32
27 AT1G73840 hydroxyproline-rich glycoprotein family protein ENHANCED SILENCING PHENOTYPE 1 -0.46 0.31 -0.31
28 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 0.46 0.32 -0.29
29 AT4G38940 Galactose oxidase/kelch repeat superfamily protein 0.46 0.31 -0.29
30 AT5G40155 Defensin-like (DEFL) family protein -0.46 0.31 -0.32
31 AT1G52390 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.46 0.33 -0.3
32 ATCG00020 photosystem II reaction center protein A photosystem II reaction center
protein A		 0.45 0.31 -0.32
33 AT5G37870 Protein with RING/U-box and TRAF-like domains -0.45 0.31 -0.32
34 AT2G17490 transposable element gene -0.45 0.32 -0.32
35 AT5G41170 Pentatricopeptide repeat (PPR-like) superfamily protein -0.45 0.33 -0.31
36 AT3G20780 topoisomerase 6 subunit B topoisomerase 6 subunit B,
BRASSINOSTEROID INSENSITIVE 3,
ELONGATED HYPOCOTYL 6, ROOT
HAIRLESS 3, topoisomerase 6
subunit B		 -0.45 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
37 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.71 0.48 -0.48 C0003
38 C0104 Glutathione - Glutathione glucosinolate biosynthesis from tryptophan,
glutathione redox reactions I,
glutathione degradation,
gamma-glutamyl cycle (plant pathway),
indole glucosinolate breakdown (active in intact plant cell),
selenate reduction,
glutathione redox reactions II,
glucosinolate biosynthesis from trihomomethionine,
ascorbate glutathione cycle,
glucosinolate biosynthesis from pentahomomethionine,
camalexin biosynthesis,
glucosinolate biosynthesis from homomethionine,
glucosinolate biosynthesis from phenylalanine,
methylglyoxal degradation I,
sulfate reduction II (assimilatory),
glucosinolate biosynthesis from dihomomethionine,
indole glucosinolate breakdown (insect chewing induced),
glutathione biosynthesis,
formaldehyde oxidation II (glutathione-dependent),
glutathione-mediated detoxification II,
glucosinolate biosynthesis from tetrahomomethionine,
glucosinolate biosynthesis from hexahomomethionine,
gamma-glutamyl cycle 		-0.49 0.3 -0.31 C0104