AGICode | AT4G36480 |
Description | long-chain base1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G36480 | long-chain base1 | long-chain base1, EMBRYO DEFECTIVE 2779, FUMONISIN B1 RESISTANT 11, long-chain base1 |
1 | 0.32 | -0.33 | ||
2 | AT5G26830 | Threonyl-tRNA synthetase | 0.69 | 0.31 | -0.33 | |||
3 | AT5G24760 | GroES-like zinc-binding dehydrogenase family protein | 0.62 | 0.31 | -0.31 | |||
4 | AT1G67550 | urease | urease | -0.61 | 0.33 | -0.31 | ||
5 | AT1G65370 | TRAF-like family protein | -0.61 | 0.32 | -0.33 | |||
6 | AT1G64270 | transposable element gene | -0.6 | 0.29 | -0.31 | |||
7 | AT1G66540 | Cytochrome P450 superfamily protein | -0.6 | 0.33 | -0.32 | |||
8 | AT1G77080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 27, FLOWERING LOCUS M, MADS AFFECTING FLOWERING 1 |
-0.6 | 0.29 | -0.32 | ||
9 | AT4G27050 | F-box/RNI-like superfamily protein | 0.59 | 0.3 | -0.33 | |||
10 | AT4G08480 | mitogen-activated protein kinase kinase kinase 9 | mitogen-activated protein kinase kinase kinase 9, MAPK/ERK KINASE KINASE 2 |
-0.58 | 0.31 | -0.31 | ||
11 | AT1G63880 | Disease resistance protein (TIR-NBS-LRR class) family | -0.57 | 0.32 | -0.31 | |||
12 | AT4G19240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits to 17 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.33 | -0.31 | |||
13 | AT5G23460 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.35 | -0.29 | |||
14 | AT1G51430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.34 | -0.3 | |||
15 | AT1G70570 | anthranilate phosphoribosyltransferase, putative | 0.57 | 0.33 | -0.31 | |||
16 | AT5G17880 | disease resistance protein (TIR-NBS-LRR class) | constitutive shade-avoidance1 | -0.57 | 0.33 | -0.29 | ||
17 | AT5G20450 | CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). |
-0.57 | 0.3 | -0.29 | |||
18 | AT1G59900 | pyruvate dehydrogenase complex E1 alpha subunit | pyruvate dehydrogenase complex E1 alpha subunit, pyruvate dehydrogenase complex E1 alpha subunit |
-0.56 | 0.33 | -0.32 | ||
19 | AT2G21550 | Bifunctional dihydrofolate reductase/thymidylate synthase | -0.56 | 0.31 | -0.29 | |||
20 | AT1G58150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.3 | |||
21 | AT1G62830 | LSD1-like 1 | ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LSD1-like 1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 |
-0.55 | 0.32 | -0.31 | ||
22 | AT5G08535 | D111/G-patch domain-containing protein | -0.55 | 0.3 | -0.31 | |||
23 | AT1G33840 | Protein of unknown function (DUF567) | -0.55 | 0.32 | -0.3 | |||
24 | AT4G08960 | phosphotyrosyl phosphatase activator (PTPA) family protein | 0.55 | 0.3 | -0.3 | |||
25 | AT5G17910 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.55 | 0.32 | -0.32 | |||
26 | AT5G06280 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.55 | 0.34 | -0.31 | |||
27 | AT5G55180 | O-Glycosyl hydrolases family 17 protein | 0.55 | 0.32 | -0.32 | |||
28 | AT5G22510 | alkaline/neutral invertase | alkaline/neutral invertase E, Arabidopsis alkaline/neutral invertase E, alkaline/neutral invertase E |
-0.54 | 0.32 | -0.31 | ||
29 | AT4G11830 | phospholipase D gamma 2 | phospholipase D gamma 2 | -0.54 | 0.31 | -0.31 | ||
30 | AT5G03200 | RING/U-box superfamily protein | -0.54 | 0.35 | -0.31 | |||
31 | AT5G05750 | DNAJ heat shock N-terminal domain-containing protein | -0.53 | 0.3 | -0.33 | |||
32 | AT5G58400 | Peroxidase superfamily protein | -0.52 | 0.33 | -0.3 | |||
33 | AT5G35840 | phytochrome C | phytochrome C | -0.52 | 0.32 | -0.31 | ||
34 | AT5G23230 | nicotinamidase 2 | nicotinamidase 2 | -0.52 | 0.32 | -0.3 | ||
35 | AT4G31570 | CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink). |
0.52 | 0.29 | -0.31 | |||
36 | AT4G03820 | Protein of unknown function (DUF3537) | -0.51 | 0.29 | -0.32 | |||
37 | AT5G35450 | Disease resistance protein (CC-NBS-LRR class) family | -0.51 | 0.32 | -0.33 | |||
38 | AT5G24530 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
DOWNY MILDEW RESISTANT 6 | -0.51 | 0.32 | -0.3 | ||
39 | AT1G49950 | telomere repeat binding factor 1 | TELOMERE REPEAT BINDING FACTOR 1, telomere repeat binding factor 1 |
-0.51 | 0.29 | -0.31 | ||
40 | AT4G13050 | Acyl-ACP thioesterase | -0.51 | 0.29 | -0.31 | |||
41 | AT4G13630 | Protein of unknown function, DUF593 | -0.5 | 0.34 | -0.32 | |||
42 | AT1G78970 | lupeol synthase 1 | ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, lupeol synthase 1 |
-0.5 | 0.33 | -0.32 | ||
43 | AT1G59960 | NAD(P)-linked oxidoreductase superfamily protein | -0.5 | 0.33 | -0.32 | |||
44 | AT3G30180 | brassinosteroid-6-oxidase 2 | brassinosteroid-6-oxidase 2, CYP85A2 |
0.49 | 0.31 | -0.34 | ||
45 | AT5G27110 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.49 | 0.32 | -0.33 | |||
46 | AT5G20580 | BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast hits to 167 proteins in 73 species: Archae - 0; Bacteria - 25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
-0.49 | 0.29 | -0.33 | |||
47 | AT1G77080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 27, FLOWERING LOCUS M, MADS AFFECTING FLOWERING 1 |
-0.49 | 0.35 | -0.33 | ||
48 | AT2G42720 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein |
0.49 | 0.31 | -0.3 | |||
49 | AT3G53710 | ARF-GAP domain 6 | ARF-GAP domain 6 | -0.48 | 0.31 | -0.32 | ||
50 | AT5G07770 | Actin-binding FH2 protein | -0.48 | 0.31 | -0.32 | |||
51 | AT4G12460 | OSBP(oxysterol binding protein)-related protein 2B | OSBP(oxysterol binding protein)-related protein 2B |
-0.48 | 0.32 | -0.31 | ||
52 | AT5G40155 | Defensin-like (DEFL) family protein | -0.48 | 0.29 | -0.31 | |||
53 | AT5G25910 | receptor like protein 52 | receptor like protein 52, receptor like protein 52 |
-0.48 | 0.34 | -0.31 | ||
54 | AT1G62850 | Class I peptide chain release factor | -0.47 | 0.31 | -0.31 | |||
55 | AT4G22280 | F-box/RNI-like superfamily protein | 0.47 | 0.32 | -0.29 | |||
56 | AT5G10270 | cyclin-dependent kinase C;1 | cyclin-dependent kinase C;1 | 0.46 | 0.33 | -0.33 | ||
57 | AT1G79000 | histone acetyltransferase of the CBP family 1 | ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, histone acetyltransferase of the CBP family 1, P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2 |
-0.46 | 0.31 | -0.33 | ||
58 | AT4G12840 | Protein of unknown function (DUF707) | -0.46 | 0.31 | -0.34 | |||
59 | AT1G80960 | F-box and Leucine Rich Repeat domains containing protein | -0.45 | 0.33 | -0.29 | |||
60 | AT3G07530 | CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). |
0.45 | 0.31 | -0.31 | |||
61 | AT4G11830 | phospholipase D gamma 2 | phospholipase D gamma 2 | -0.45 | 0.33 | -0.31 | ||
62 | AT4G15710 | unknown protein; Has 18 Blast hits to 18 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.45 | 0.32 | -0.3 | |||
63 | AT4G29050 | Concanavalin A-like lectin protein kinase family protein | -0.44 | 0.31 | -0.31 | |||
64 | AT4G09680 | conserved telomere maintenance component 1 | ATCTC1, conserved telomere maintenance component 1 |
-0.44 | 0.31 | -0.31 | ||
65 | AT1G65280 | DNAJ heat shock N-terminal domain-containing protein | -0.44 | 0.31 | -0.32 | |||
66 | AT1G69550 | disease resistance protein (TIR-NBS-LRR class) | -0.43 | 0.3 | -0.33 | |||
67 | AT5G42280 | Cysteine/Histidine-rich C1 domain family protein | -0.43 | 0.32 | -0.3 | |||
68 | AT1G64300 | Protein kinase family protein | -0.43 | 0.33 | -0.32 | |||
69 | AT3G42540 | transposable element gene | 0.42 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
70 | C0038 | 5-(Methylthio)pentylglucosinolate | - | 5-Methylthiopentylglucosinolate | glucosinolate biosynthesis from trihomomethionine | -0.82 | 0.45 | -0.46 | ||
71 | C0207 | Phosphatidylglycerol-34:5 | - | - | - | 0.74 | 0.47 | -0.47 | ||
72 | C0033 | 4-(Methylsulfinyl)butylglucosinolate | - | 4-Methylsulfinylbutyl glucosinolate | glucosinolate biosynthesis from dihomomethionine | -0.69 | 0.43 | -0.46 | ||
73 | C0037 | 5-Methylsulfinyl-n-pentylglucosinolate | - | 5-Methylsulfinylpentyl glucosinolate | glucosinolate biosynthesis from trihomomethionine | -0.6 | 0.3 | -0.3 | ||
74 | C0244 | Sucrose | D-Sucrose | Sucrose | stachyose biosynthesis, fructan degradation, stachyose degradation, galactose degradation III, superpathway of sucrose and starch metabolism II (photosynthetic tissue), sucrose degradation III, UDP-glucose biosynthesis (from sucrose), ajugose biosynthesis II (galactinol-independent), sucrose biosynthesis I |
-0.53 | 0.3 | -0.34 | ||
75 | C0034 | 4-Methylthio-n-butylglucosinolate | - | 4-Methylthiobutyl glucosinolate | glucosinolate biosynthesis from dihomomethionine | -0.5 | 0.3 | -0.31 | ||
76 | C0040 | 6-Methylsulfinyl-n-hexylglucosinolate | - | 6-Methylsulfinylhexyl glucosinolate | glucosinolate biosynthesis from tetrahomomethionine | -0.49 | 0.32 | -0.31 |