AT4G36590 : -
Query Information
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AGICode AT4G36590
Description MADS-box transcription factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G36590 MADS-box transcription factor family protein 1 0.33 -0.32
2 AT2G42710 Ribosomal protein L1p/L10e family -0.62 0.32 -0.33
3 AT5G23250 Succinyl-CoA ligase, alpha subunit -0.6 0.32 -0.31
4 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.59 0.3 -0.32
5 AT2G05600 F-box associated ubiquitination effector family protein 0.58 0.33 -0.3
6 AT2G01970 Endomembrane protein 70 protein family -0.58 0.32 -0.31
7 AT2G17750 NEP-interacting protein 1 NEP-interacting protein 1 0.57 0.32 -0.31
8 AT2G46690 SAUR-like auxin-responsive protein family 0.56 0.32 -0.31
9 AT2G15690 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.34 -0.3
10 AT5G52910 timeless family protein TIMELESS -0.55 0.3 -0.29
11 AT3G29220 transposable element gene 0.55 0.31 -0.3
12 AT1G60650 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1b, RZ-1b -0.54 0.32 -0.32
13 AT1G71840 transducin family protein / WD-40 repeat family protein -0.53 0.3 -0.31
14 AT1G21850 SKU5 similar 8 SKU5 similar 8 0.53 0.33 -0.31
15 AT3G44950 glycine-rich protein 0.53 0.31 -0.29
16 AT2G06700 transposable element gene 0.53 0.3 -0.32
17 AT2G32000 DNA topoisomerase, type IA, core 0.53 0.3 -0.32
18 AT1G12830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 39778
Blast hits to 22088 proteins in 1060 species: Archae - 152;
Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants -
2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI
BLink).		 -0.53 0.3 -0.32
19 AT4G09980 Methyltransferase MT-A70 family protein EMBRYO DEFECTIVE 1691 -0.52 0.3 -0.33
20 AT5G62040 PEBP (phosphatidylethanolamine-binding protein) family
protein		 brother of FT and TFL1 0.52 0.35 -0.31
21 AT1G10000 Ribonuclease H-like superfamily protein 0.52 0.32 -0.31
22 AT4G22110 GroES-like zinc-binding dehydrogenase family protein 0.51 0.29 -0.31
23 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 0.5 0.32 -0.32
24 AT3G25160 ER lumen protein retaining receptor family protein 0.49 0.31 -0.32
25 AT5G44780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20020.2); Has 9661 Blast hits
to 6233 proteins in 635 species: Archae - 4; Bacteria -
1116; Metazoa - 4251; Fungi - 1510; Plants - 1359; Viruses
- 43; Other Eukaryotes - 1378 (source: NCBI BLink).		 -0.49 0.3 -0.32
26 AT3G29600 transposable element gene -0.48 0.32 -0.32
27 AT1G22600 Late embryogenesis abundant protein (LEA) family protein 0.48 0.34 -0.32
28 AT3G25182 Pseudogene of AT5G24050; DNA binding protein 0.46 0.31 -0.32
29 AT1G42450 transposable element gene 0.46 0.34 -0.33
30 AT1G19410 FBD / Leucine Rich Repeat domains containing protein 0.45 0.32 -0.29
31 AT5G16770 myb domain protein 9 myb domain protein 9, myb domain
protein 9		 0.45 0.32 -0.31
32 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.45 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
33 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.64 0.46 -0.44 C0053
34 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) 0.6 0.32 -0.31 C0142
35 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II 0.57 0.32 -0.3 C0097