AT5G15980 : -

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AGICode	AT5G15980
Description	Pentatricopeptide repeat (PPR) superfamily protein

Gene information

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	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT5G15980	Pentatricopeptide repeat (PPR) superfamily protein		1	0.31	-0.31
2	AT1G64190	6-phosphogluconate dehydrogenase family protein		0.82	0.31	-0.33
3	AT5G35730	EXS (ERD1/XPR1/SYG1) family protein		0.82	0.31	-0.29
4	AT1G65280	DNAJ heat shock N-terminal domain-containing protein		0.82	0.29	-0.32
5	AT1G43170	ribosomal protein 1	ribosomal protein 1, embryo defective 2207, ribosomal protein 1, RPL3A	0.78	0.31	-0.34
6	AT1G65290	mitochondrial acyl carrier protein 2	mitochondrial acyl carrier protein 2	0.77	0.3	-0.31
7	AT1G68370	Chaperone DnaJ-domain superfamily protein	ALTERED RESPONSE TO GRAVITY 1	0.77	0.33	-0.32
8	AT5G39990	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein		0.77	0.3	-0.32
9	AT1G61870	pentatricopeptide repeat 336	pentatricopeptide repeat 336	0.77	0.31	-0.29
10	AT5G35450	Disease resistance protein (CC-NBS-LRR class) family		0.76	0.33	-0.31
11	AT1G59900	pyruvate dehydrogenase complex E1 alpha subunit	pyruvate dehydrogenase complex E1 alpha subunit, pyruvate dehydrogenase complex E1 alpha subunit	0.76	0.29	-0.31
12	AT4G13630	Protein of unknown function, DUF593		0.76	0.33	-0.31
13	AT3G53710	ARF-GAP domain 6	ARF-GAP domain 6	0.76	0.29	-0.31
14	AT1G66620	Protein with RING/U-box and TRAF-like domains		0.76	0.32	-0.32
15	AT1G64490	DEK, chromatin associated protein		0.76	0.3	-0.3
16	AT4G13050	Acyl-ACP thioesterase		0.76	0.33	-0.32
17	AT5G38630	cytochrome B561-1	cytochrome B561-1, cytochrome B561-1	0.74	0.29	-0.31
18	AT5G05750	DNAJ heat shock N-terminal domain-containing protein		0.73	0.3	-0.31
19	AT5G05890	UDP-Glycosyltransferase superfamily protein		0.73	0.31	-0.33
20	AT1G47250	20S proteasome alpha subunit F2	20S proteasome alpha subunit F2	0.72	0.31	-0.32
21	AT5G27990	Pre-rRNA-processing protein TSR2, conserved region		0.72	0.3	-0.31
22	AT5G23230	nicotinamidase 2	nicotinamidase 2	0.72	0.3	-0.33
23	AT4G33360	NAD(P)-binding Rossmann-fold superfamily protein	farnesol dehydrogenase	0.72	0.3	-0.31
24	AT4G27050	F-box/RNI-like superfamily protein		-0.72	0.31	-0.34
25	AT1G48840	Plant protein of unknown function (DUF639)		-0.71	0.33	-0.31
26	AT1G63880	Disease resistance protein (TIR-NBS-LRR class) family		0.7	0.32	-0.32
27	AT4G02450	HSP20-like chaperones superfamily protein		0.7	0.31	-0.29
28	AT5G17890	DA1-related protein 4	CHILLING SENSITIVE 3, DA1-related protein 4	0.7	0.31	-0.32
29	AT1G52760	lysophospholipase 2	lysophospholipase 2	0.7	0.33	-0.33
30	AT3G55170	Ribosomal L29 family protein		0.69	0.3	-0.32
31	AT1G66540	Cytochrome P450 superfamily protein		0.69	0.32	-0.35
32	AT1G59960	NAD(P)-linked oxidoreductase superfamily protein		0.69	0.31	-0.32
33	AT1G52260	PDI-like 1-5	ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5, PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5	0.69	0.32	-0.3
34	AT5G42280	Cysteine/Histidine-rich C1 domain family protein		0.68	0.34	-0.31
35	AT1G61730	DNA-binding storekeeper protein-related transcriptional regulator		0.68	0.3	-0.33
36	AT1G74320	Protein kinase superfamily protein		0.68	0.32	-0.31
37	AT5G02100	Oxysterol-binding family protein	OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A, UNFERTILIZED EMBRYO SAC 18	0.68	0.31	-0.31
38	AT4G01910	Cysteine/Histidine-rich C1 domain family protein		0.68	0.31	-0.3
39	AT1G64220	translocase of outer membrane 7 kDa subunit 2	translocase of outer membrane 7 kDa subunit 2	0.68	0.33	-0.3
40	AT5G05760	syntaxin of plants 31	ATSED5, ATSYP31, T-SNARE SED 5, syntaxin of plants 31	0.67	0.32	-0.32
41	AT4G25710	Galactose oxidase/kelch repeat superfamily protein		0.67	0.31	-0.33
42	AT1G63540	hydroxyproline-rich glycoprotein family protein		-0.67	0.31	-0.31
43	AT4G22720	Actin-like ATPase superfamily protein		0.67	0.32	-0.32
44	AT5G28030	L-cysteine desulfhydrase 1	L-cysteine desulfhydrase 1	-0.67	0.31	-0.31
45	AT1G62830	LSD1-like 1	ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LSD1-like 1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1	0.66	0.32	-0.3
46	AT1G58150	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.66	0.3	-0.31
47	AT4G12840	Protein of unknown function (DUF707)		0.66	0.3	-0.3
48	AT1G65370	TRAF-like family protein		0.66	0.32	-0.31
49	AT1G61790	Oligosaccharyltransferase complex/magnesium transporter family protein		0.65	0.31	-0.34
50	AT4G25100	Fe superoxide dismutase 1	ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, Fe superoxide dismutase 1	0.65	0.3	-0.33
51	AT5G27110	Tetratricopeptide repeat (TPR)-like superfamily protein		0.64	0.3	-0.31
52	AT4G05050	ubiquitin 11	ubiquitin 11	0.64	0.32	-0.32
53	AT1G67550	urease	urease	0.64	0.33	-0.32
54	AT1G52100	Mannose-binding lectin superfamily protein		0.63	0.34	-0.32
55	AT1G68930	pentatricopeptide (PPR) repeat-containing protein		0.63	0.32	-0.31
56	AT4G09680	conserved telomere maintenance component 1	ATCTC1, conserved telomere maintenance component 1	0.63	0.31	-0.32
57	AT5G08565	Transcription initiation Spt4-like protein		0.63	0.31	-0.32
58	AT5G03200	RING/U-box superfamily protein		0.63	0.32	-0.31
59	AT5G15360	unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.62	0.34	-0.33
60	AT4G22000	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).		0.62	0.31	-0.3
61	AT1G50290	unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.62	0.29	-0.33
62	AT5G39950	thioredoxin 2	Arabidopsis thioredoxin h2, thioredoxin 2, ATTRXH2, thioredoxin 2, THIOREDOXIN H2	0.62	0.32	-0.32
63	AT5G49840	ATP-dependent Clp protease		-0.62	0.32	-0.31
64	AT1G54040	epithiospecifier protein	epithiospecifier protein, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY	-0.62	0.33	-0.33
65	AT5G26270	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		0.62	0.3	-0.3
66	AT1G64270	transposable element gene		0.62	0.32	-0.31
67	AT5G02310	proteolysis 6	proteolysis 6	-0.62	0.31	-0.31
68	AT5G23710	DNA binding;DNA-directed RNA polymerases		0.62	0.31	-0.32
69	AT4G03050	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	AOP3	-0.61	0.33	-0.32
70	AT5G17880	disease resistance protein (TIR-NBS-LRR class)	constitutive shade-avoidance1	0.61	0.32	-0.32
71	AT4G31570	CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink).		-0.61	0.3	-0.33
72	AT5G40830	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		0.6	0.31	-0.33
73	AT1G69790	Protein kinase superfamily protein		-0.6	0.34	-0.33
74	AT5G20580	BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast hits to 167 proteins in 73 species: Archae - 0; Bacteria - 25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).		0.6	0.33	-0.31
75	AT3G47210	Plant protein of unknown function (DUF247)		0.6	0.31	-0.32
76	AT4G01790	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein		0.6	0.34	-0.32
77	AT5G41650	Lactoylglutathione lyase / glyoxalase I family protein		0.59	0.33	-0.29
78	AT1G78970	lupeol synthase 1	ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, lupeol synthase 1	0.59	0.32	-0.31
79	AT4G02540	Cysteine/Histidine-rich C1 domain family protein		0.58	0.32	-0.32
80	AT1G61280	Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit		0.58	0.33	-0.32
81	AT4G01130	GDSL-like Lipase/Acylhydrolase superfamily protein		0.58	0.3	-0.31
82	AT4G27820	beta glucosidase 9	beta glucosidase 9	-0.58	0.3	-0.3
83	AT4G05460	RNI-like superfamily protein		0.58	0.32	-0.32
84	AT4G01860	Transducin family protein / WD-40 repeat family protein		0.58	0.31	-0.34
85	AT1G51430	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.57	0.33	-0.29
86	AT5G17240	SET domain group 40	SET domain group 40	0.57	0.31	-0.32
87	AT1G62330	O-fucosyltransferase family protein		0.57	0.31	-0.32
88	AT1G30650	WRKY DNA-binding protein 14	AR411, WRKY DNA-BINDING PROTEIN 14, WRKY DNA-binding protein 14	0.57	0.32	-0.32
89	AT5G20680	TRICHOME BIREFRINGENCE-LIKE 16	TRICHOME BIREFRINGENCE-LIKE 16	0.57	0.33	-0.32
90	AT1G80970	XH domain-containing protein		0.57	0.32	-0.32
91	AT1G64300	Protein kinase family protein		0.57	0.31	-0.3
92	AT3G04680	CLP-similar protein 3	CLP-similar protein 3	0.56	0.32	-0.32
93	AT1G60710	NAD(P)-linked oxidoreductase superfamily protein	ATB2	0.56	0.3	-0.32
94	AT1G50520	cytochrome P450, family 705, subfamily A, polypeptide 27	cytochrome P450, family 705, subfamily A, polypeptide 27	0.56	0.32	-0.32
95	AT1G44130	Eukaryotic aspartyl protease family protein		0.56	0.35	-0.3
96	AT1G52590	Putative thiol-disulphide oxidoreductase DCC		-0.56	0.29	-0.33
97	AT4G11410	NAD(P)-binding Rossmann-fold superfamily protein		0.56	0.32	-0.31
98	AT1G62670	rna processing factor 2	rna processing factor 2	0.56	0.31	-0.3
99	AT1G79000	histone acetyltransferase of the CBP family 1	ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, histone acetyltransferase of the CBP family 1, P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2	0.56	0.31	-0.31
100	AT5G23570	XS domain-containing protein / XS zinc finger domain-containing protein-related	SUPPRESSOR OF GENE SILENCING 3, SUPPRESSOR OF GENE SILENCING 3	-0.56	0.31	-0.31
101	AT4G34030	3-methylcrotonyl-CoA carboxylase	3-methylcrotonyl-CoA carboxylase	-0.55	0.33	-0.31
102	AT4G22960	Protein of unknown function (DUF544)		-0.55	0.31	-0.32
103	AT1G32360	Zinc finger (CCCH-type) family protein		-0.55	0.3	-0.31
104	AT4G22280	F-box/RNI-like superfamily protein		-0.55	0.32	-0.32
105	ATCG00120	ATP synthase subunit alpha	ATP synthase subunit alpha	-0.55	0.32	-0.3
106	AT1G80900	magnesium transporter 1	MAGNESIUM TRANSPORTER 1, magnesium transporter 1, MRS2-10	-0.54	0.31	-0.32
107	AT4G19240	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits to 17 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.54	0.3	-0.3
108	AT3G50660	Cytochrome P450 superfamily protein	CLOMAZONE-RESISTANT, CYTOCHROME P450 90B1, DWARF 4, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SHADE AVOIDANCE 1, SUPPRESSOR OF NPH4 2	-0.54	0.3	-0.31
109	AT5G24760	GroES-like zinc-binding dehydrogenase family protein		-0.52	0.29	-0.33
110	AT3G30180	brassinosteroid-6-oxidase 2	brassinosteroid-6-oxidase 2, CYP85A2	-0.52	0.34	-0.32
111	AT1G48310	chromatin remodeling factor18	CHA18, chromatin remodeling factor18	-0.52	0.31	-0.35
112	AT1G27590	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		-0.52	0.33	-0.34
113	AT1G69720	heme oxygenase 3	heme oxygenase 3	-0.52	0.33	-0.33
114	AT1G68760	nudix hydrolase 1	ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 1, nudix hydrolase 1, nudix hydrolase 1, NUDIX HYDROLASE 1	-0.51	0.32	-0.31
115	AT1G16090	wall associated kinase-like 7	wall associated kinase-like 7	-0.5	0.33	-0.3
116	ATCG00510	photsystem I subunit I	photsystem I subunit I	-0.5	0.33	-0.31
117	AT5G07660	structural maintenance of chromosomes 6A	structural maintenance of chromosomes 6A	-0.49	0.3	-0.31
118	AT4G29770	Target of trans acting-siR480/255.		-0.49	0.31	-0.3
119	AT4G00335	RING-H2 finger B1A	RING-H2 finger B1A	-0.48	0.3	-0.33
120	AT2G20830	transferases;folic acid binding		-0.47	0.32	-0.29
121	ATCG00020	photosystem II reaction center protein A	photosystem II reaction center protein A	-0.47	0.35	-0.31
122	AT4G32760	ENTH/VHS/GAT family protein		-0.47	0.31	-0.32
123	AT1G74150	Galactose oxidase/kelch repeat superfamily protein		-0.46	0.3	-0.32
124	AT1G33520	D111/G-patch domain-containing protein	modifier of snc1, 2	-0.45	0.31	-0.33

Metabolite information

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	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
125	C0033	4-(Methylsulfinyl)butylglucosinolate	-	4-Methylsulfinylbutyl glucosinolate	glucosinolate biosynthesis from dihomomethionine	0.8	0.47	-0.45
126	C0034	4-Methylthio-n-butylglucosinolate	-	4-Methylthiobutyl glucosinolate	glucosinolate biosynthesis from dihomomethionine	0.73	0.3	-0.31
127	C0178	MST_2446.7	-	-	-	-0.72	0.44	-0.45
128	C0244	Sucrose	D-Sucrose	Sucrose	stachyose biosynthesis, fructan degradation, stachyose degradation, galactose degradation III, superpathway of sucrose and starch metabolism II (photosynthetic tissue), sucrose degradation III, UDP-glucose biosynthesis (from sucrose), ajugose biosynthesis II (galactinol-independent), sucrose biosynthesis I	0.68	0.32	-0.32
129	C0127	Isorhamnetin-hexosyl-rhamnoside	-	-	-	0.67	0.44	-0.43
130	C0037	5-Methylsulfinyl-n-pentylglucosinolate	-	5-Methylsulfinylpentyl glucosinolate	glucosinolate biosynthesis from trihomomethionine	0.57	0.29	-0.33

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