AT5G29020 : -
Query Information
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AGICode AT5G29020
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G29020 transposable element gene 1 0.31 -0.33
2 AT3G46350 Leucine-rich repeat protein kinase family protein 0.69 0.31 -0.33
3 AT1G41810 transposable element gene 0.69 0.32 -0.31
4 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.63 0.31 -0.31
5 AT1G05900 endonuclease III 2 ATNTH2, endonuclease III 2 0.63 0.32 -0.27
6 AT5G51320 transposable element gene 0.63 0.29 -0.31
7 AT2G29220 Concanavalin A-like lectin protein kinase family protein -0.63 0.28 -0.33
8 AT4G22020 pseudogene, hypothetical protein, similar to
uncharacterized glycine-rich protein (GI:7269047)
{Arabidopsis thaliana}		 -0.62 0.31 -0.3
9 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.62 0.3 -0.3
10 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.31
11 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.31
12 AT4G31750 HOPW1-1-interacting 2 HOPW1-1-interacting 2 -0.6 0.33 -0.33
13 AT4G26930 myb domain protein 97 myb domain protein 97, myb domain
protein 97		 0.6 0.32 -0.31
14 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.59 0.32 -0.31
15 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.59 0.29 -0.32
16 AT5G26630 MADS-box transcription factor family protein 0.59 0.31 -0.32
17 AT2G39100 RING/U-box superfamily protein 0.58 0.32 -0.28
18 AT1G59750 auxin response factor 1 auxin response factor 1 0.58 0.32 -0.3
19 AT4G10210 Protein of Unknown Function (DUF239) 0.58 0.29 -0.31
20 AT1G43770 RING/FYVE/PHD zinc finger superfamily protein 0.57 0.32 -0.3
21 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.3
22 AT5G26700 RmlC-like cupins superfamily protein -0.56 0.33 -0.32
23 AT1G03720 Cysteine proteinases superfamily protein -0.56 0.32 -0.3
24 AT4G03690 transposable element gene -0.56 0.34 -0.33
25 AT1G70510 KNOTTED-like from Arabidopsis thaliana 2 ARABIDOPSIS THALIANA KN 1,
KNOTTED-like from Arabidopsis
thaliana 2		 0.56 0.32 -0.33
26 AT2G10465 transposable element gene 0.55 0.32 -0.33
27 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.55 0.32 -0.32
28 AT5G37880 transposable element gene 0.55 0.33 -0.27
29 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.55 0.32 -0.3
30 AT1G53060 Legume lectin family protein 0.55 0.34 -0.33
31 AT3G43790 zinc induced facilitator-like 2 zinc induced facilitator-like 2 0.55 0.3 -0.31
32 AT3G47680 DNA binding 0.55 0.31 -0.32
33 AT2G38185 RING/U-box superfamily protein 0.54 0.33 -0.33
34 AT5G09340 Ubiquitin family protein 0.54 0.31 -0.34
35 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 -0.54 0.34 -0.32
36 AT4G09480 transposable element gene 0.54 0.34 -0.32
37 AT2G17920 nucleic acid binding;zinc ion binding -0.54 0.3 -0.29
38 AT4G09110 RING/U-box superfamily protein -0.54 0.32 -0.31
39 AT2G41590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits
to 217 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.33 -0.35
40 AT3G43660 Vacuolar iron transporter (VIT) family protein -0.54 0.3 -0.31
41 AT3G10990 F-box associated ubiquitination effector family protein 0.54 0.32 -0.31
42 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 0.53 0.32 -0.33
43 AT1G33475 SNARE-like superfamily protein 0.53 0.32 -0.31
44 AT3G58540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06190.2); Has 6 Blast
hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.29 -0.29
45 AT1G21780 BTB/POZ domain-containing protein 0.53 0.31 -0.32
46 AT1G11880 transferases, transferring hexosyl groups 0.53 0.31 -0.32
47 AT3G55870 ADC synthase superfamily protein 0.52 0.32 -0.32
48 AT2G14640 transposable element gene 0.52 0.32 -0.3
49 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.3 -0.32
50 AT3G17180 serine carboxypeptidase-like 33 serine carboxypeptidase-like 33 0.52 0.32 -0.32
51 AT3G13400 SKU5 similar 13 SKU5 similar 13 -0.52 0.3 -0.31
52 AT5G44760 C2 domain-containing protein 0.52 0.31 -0.31
53 AT5G35600 histone deacetylase7 histone deacetylase7 -0.5 0.31 -0.32
54 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein -0.49 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.75 0.45 -0.42 C0234
56 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.74 0.46 -0.41 C0011
57 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.71 0.44 -0.41 C0032
58 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.67 0.43 -0.43 C0091
59 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.67 0.42 -0.41
60 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.66 0.43 -0.46 C0053
61 C0229 Robinin - - flavone biosynthesis 0.66 0.47 -0.45