AT5G29000 : PHR1-like 1
Query Information
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AGICode AT5G29000
Description Homeodomain-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G29000 Homeodomain-like superfamily protein PHR1-like 1 1 0.32 -0.3
2 AT5G47560 tonoplast dicarboxylate transporter ATSDAT, TONOPLAST DICARBOXYLATE
TRANSPORTER, tonoplast
dicarboxylate transporter		 0.82 0.31 -0.3
3 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 0.78 0.34 -0.32
4 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.75 0.33 -0.32
5 AT3G53180 glutamate-ammonia ligases;catalytics;glutamate-ammonia
ligases		 nodulin/glutamine synthase-like
protein		 0.75 0.31 -0.3
6 AT4G29820 homolog of CFIM-25 ARABIDOPSIS THALIANA HOMOLOG OF
CFIM-25, homolog of CFIM-25		 0.74 0.29 -0.3
7 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.74 0.29 -0.31
8 AT4G38370 Phosphoglycerate mutase family protein -0.73 0.32 -0.32
9 AT1G31820 Amino acid permease family protein 0.73 0.28 -0.33
10 AT3G51440 Calcium-dependent phosphotriesterase superfamily protein 0.72 0.31 -0.31
11 AT1G49230 RING/U-box superfamily protein -0.71 0.33 -0.31
12 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase 0.71 0.32 -0.31
13 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.32 -0.32
14 AT2G43460 Ribosomal L38e protein family -0.7 0.32 -0.32
15 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 0.7 0.3 -0.32
16 AT5G14780 formate dehydrogenase formate dehydrogenase 0.7 0.3 -0.32
17 AT5G25770 alpha/beta-Hydrolases superfamily protein 0.7 0.33 -0.3
18 AT2G37650 GRAS family transcription factor 0.7 0.32 -0.32
19 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 -0.69 0.29 -0.31
20 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.69 0.3 -0.31
21 AT4G27720 Major facilitator superfamily protein -0.69 0.31 -0.3
22 AT1G62810 Copper amine oxidase family protein 0.68 0.35 -0.33
23 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.33 -0.32
24 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.32 -0.31
25 AT5G07300 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 2 -0.68 0.31 -0.33
26 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 0.68 0.31 -0.33
27 AT3G55005 tonneau 1b (TON1b) tonneau 1b -0.67 0.32 -0.31
28 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.67 0.31 -0.3
29 AT2G21880 RAB GTPase homolog 7A RAB GTPase homolog 7A, ARABIDOPSIS
RAB GTPASE HOMOLOG G2, RAB GTPase
homolog 7A		 -0.67 0.3 -0.31
30 AT4G22010 SKU5 similar 4 SKU5 similar 4 -0.67 0.32 -0.29
31 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 0.66 0.33 -0.31
32 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 0.66 0.32 -0.32
33 AT2G32760 unknown protein; Has 229 Blast hits to 229 proteins in 104
species: Archae - 0; Bacteria - 2; Metazoa - 79; Fungi -
90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source:
NCBI BLink).		 -0.66 0.31 -0.31
34 AT5G39590 TLD-domain containing nucleolar protein 0.66 0.3 -0.31
35 AT3G56810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 14 Blast hits to 14 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.66 0.35 -0.31
36 AT3G03470 cytochrome P450, family 87, subfamily A, polypeptide 9 cytochrome P450, family 87,
subfamily A, polypeptide 9		 0.66 0.32 -0.33
37 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.31 -0.3
38 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.66 0.31 -0.32
39 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B 0.65 0.33 -0.32
40 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 0.65 0.33 -0.33
41 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 -0.65 0.31 -0.3
42 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 0.64 0.32 -0.34
43 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.64 0.33 -0.33
44 AT5G62230 ERECTA-like 1 ERECTA-like 1 -0.64 0.31 -0.33
45 AT1G71750 Hypoxanthine-guanine phosphoribosyltransferase Hypoxanthine-guanine
phosphoribosyltransferase		 -0.64 0.32 -0.32
46 AT5G24316 proline-rich family protein 0.64 0.31 -0.31
47 AT5G36910 thionin 2.2 thionin 2.2 -0.64 0.32 -0.32
48 AT5G09250 ssDNA-binding transcriptional regulator KIWI -0.64 0.3 -0.32
49 AT3G03120 ADP-ribosylation factor B1C ADP-ribosylation factor B1C,
ADP-ribosylation factor B1C		 0.64 0.31 -0.31
50 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 0.64 0.3 -0.31
51 AT1G62150 Mitochondrial transcription termination factor family
protein		 -0.64 0.31 -0.33
52 AT5G57655 xylose isomerase family protein 0.64 0.29 -0.32
53 AT5G10260 RAB GTPase homolog H1E RAB GTPase homolog H1E, RAB GTPase
homolog H1E		 -0.64 0.32 -0.3
54 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.31
55 AT2G22660 Protein of unknown function (duplicated DUF1399) 0.64 0.31 -0.33
56 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 -0.63 0.3 -0.3
57 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 -0.63 0.31 -0.32
58 AT2G46370 Auxin-responsive GH3 family protein FAR-RED INSENSITIVE 219, JASMONATE
RESISTANT 1		 0.63 0.32 -0.31
59 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 -0.63 0.32 -0.29
60 AT4G08290 nodulin MtN21 /EamA-like transporter family protein 0.63 0.31 -0.29
61 AT5G09870 cellulose synthase 5 cellulose synthase 5 -0.63 0.31 -0.31
62 AT5G47930 Zinc-binding ribosomal protein family protein -0.63 0.29 -0.33
63 AT1G23330 alpha/beta-Hydrolases superfamily protein 0.63 0.32 -0.34
64 AT1G29050 TRICHOME BIREFRINGENCE-LIKE 38 TRICHOME BIREFRINGENCE-LIKE 38 0.63 0.31 -0.32
65 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 0.63 0.33 -0.31
66 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 0.63 0.33 -0.31
67 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 -0.63 0.31 -0.32
68 AT5G07100 WRKY DNA-binding protein 26 WRKY DNA-binding protein 26 0.63 0.32 -0.32
69 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 -0.63 0.33 -0.32
70 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.62 0.34 -0.32
71 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.62 0.32 -0.33
72 AT3G52640 Zn-dependent exopeptidases superfamily protein -0.62 0.32 -0.31
73 AT1G78440 Arabidopsis thaliana gibberellin 2-oxidase 1 Arabidopsis thaliana gibberellin
2-oxidase 1, gibberellin 2-oxidase
1		 -0.62 0.33 -0.32
74 AT3G12750 zinc transporter 1 precursor zinc transporter 1 precursor 0.62 0.32 -0.31
75 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.32 -0.31
76 AT1G48320 Thioesterase superfamily protein 0.62 0.32 -0.31
77 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.32 -0.31
78 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 0.62 0.29 -0.34
79 AT2G43420 3-beta hydroxysteroid dehydrogenase/isomerase family
protein		 0.62 0.32 -0.31
80 AT2G36660 poly(A) binding protein 7 poly(A) binding protein 7 -0.61 0.33 -0.34
81 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 -0.61 0.31 -0.32
82 AT2G02800 protein kinase 2B protein kinase 2B, kinase 2 -0.61 0.31 -0.3
83 AT1G80280 alpha/beta-Hydrolases superfamily protein -0.61 0.31 -0.31
84 AT1G11240 CONTAINS InterPro DOMAIN/s: Nucleolar protein 12
(InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins
in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921;
Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes -
933 (source: NCBI BLink).		 -0.61 0.31 -0.32
85 AT5G40890 chloride channel A chloride channel A, ATCLCA,
chloride channel A, CHLORIDE
CHANNEL-A, CHLORIDE CHANNEL A		 0.61 0.32 -0.32
86 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 -0.6 0.29 -0.29
87 AT5G16530 Auxin efflux carrier family protein PIN-FORMED 5 -0.6 0.32 -0.31
88 AT5G50400 purple acid phosphatase 27 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 27, purple acid
phosphatase 27		 0.6 0.33 -0.29
89 AT4G01575 serine protease inhibitor, Kazal-type family protein -0.6 0.32 -0.31
90 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.6 0.31 -0.32
91 AT3G52550 BEST Arabidopsis thaliana protein match is: ovate family
protein 18 (TAIR:AT3G52540.1); Has 5496 Blast hits to 1338
proteins in 151 species: Archae - 0; Bacteria - 23; Metazoa
- 3754; Fungi - 379; Plants - 301; Viruses - 154; Other
Eukaryotes - 885 (source: NCBI BLink).		 -0.6 0.31 -0.3
92 AT2G47310 flowering time control protein-related / FCA gamma-related 0.6 0.34 -0.32
93 AT3G60180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.3 -0.29
94 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 -0.6 0.3 -0.32
95 AT3G23820 UDP-D-glucuronate 4-epimerase 6 UDP-D-glucuronate 4-epimerase 6 -0.6 0.32 -0.3
96 AT4G15260 UDP-Glycosyltransferase superfamily protein 0.6 0.3 -0.34
97 AT2G20240 Protein of unknown function (DUF3741) -0.59 0.3 -0.3
98 AT2G30690 Protein of unknown function, DUF593 -0.59 0.3 -0.28
99 AT4G31360 selenium binding -0.59 0.32 -0.32
100 AT1G20640 Plant regulator RWP-RK family protein -0.59 0.32 -0.31
101 AT3G17830 Molecular chaperone Hsp40/DnaJ family protein -0.59 0.34 -0.31
102 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 -0.59 0.31 -0.32
103 AT1G07970 CONTAINS InterPro DOMAIN/s: Cytochrome B561-related,
N-terminal (InterPro:IPR019176); Has 215 Blast hits to 213
proteins in 79 species: Archae - 0; Bacteria - 6; Metazoa -
131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes
- 14 (source: NCBI BLink).		 -0.58 0.3 -0.32
104 AT1G25490 ARM repeat superfamily protein ATB BETA BETA, ENHANCED ETHYLENE
RESPONSE 1, ROOTS CURL IN NPA,
REGA		 -0.58 0.31 -0.32
105 AT5G14440 Surfeit locus protein 2 (SURF2) -0.58 0.32 -0.32
106 AT1G70060 SIN3-like 4 SIN3-like 4 -0.58 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.79 0.46 -0.45 C0010