AT5G25370 : phospholipase D alpha 3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G25370
Description phospholipase D alpha 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 1 0.31 -0.3
2 AT5G49945 Protein of unknown function (DUF1682) 0.75 0.31 -0.33
3 AT3G62330 Zinc knuckle (CCHC-type) family protein -0.75 0.32 -0.32
4 AT3G57820 60S ribosomal protein L21 (RPL21F), pseudogene, 60S
RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana,
SWISSPROT:RL21_ARATH; blastp match of 75% identity and
2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S
ribosomal protein L21 {Oryza sativa}		 0.73 0.34 -0.3
5 AT4G10370 Cysteine/Histidine-rich C1 domain family protein 0.7 0.3 -0.32
6 AT4G07790 transposable element gene 0.7 0.33 -0.33
7 AT1G52840 transposable element gene 0.69 0.31 -0.34
8 AT5G55900 Sucrase/ferredoxin-like family protein -0.69 0.32 -0.3
9 AT3G05280 Integral membrane Yip1 family protein 0.69 0.31 -0.33
10 AT4G03760 transposable element gene 0.68 0.32 -0.33
11 AT2G23480 transposable element gene 0.68 0.31 -0.31
12 AT1G70060 SIN3-like 4 SIN3-like 4 0.68 0.31 -0.33
13 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 0.67 0.34 -0.31
14 AT1G65940 pseudogene, similar to Dof zinc finger protein, blastp
match of 61% identity and 1.7e-10 P-value to
GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein
{Oryza sativa}		 0.67 0.31 -0.3
15 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 0.66 0.33 -0.32
16 AT5G22420 fatty acid reductase 7 fatty acid reductase 7 0.66 0.3 -0.3
17 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.65 0.3 -0.33
18 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.31
19 AT4G13800 Protein of unknown function (DUF803) 0.64 0.31 -0.32
20 AT5G25430 HCO3- transporter family 0.64 0.29 -0.3
21 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 0.63 0.32 -0.31
22 AT1G47655 Dof-type zinc finger DNA-binding family protein 0.63 0.32 -0.33
23 AT1G52660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.31
24 AT5G59130 Subtilase family protein 0.63 0.32 -0.31
25 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.63 0.31 -0.32
26 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 -0.63 0.32 -0.3
27 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.3 -0.32
28 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.62 0.34 -0.31
29 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 0.62 0.33 -0.32
30 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.62 0.33 -0.32
31 AT4G17670 Protein of unknown function (DUF581) 0.62 0.33 -0.32
32 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.62 0.32 -0.3
33 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 0.62 0.32 -0.33
34 AT1G11090 alpha/beta-Hydrolases superfamily protein 0.62 0.31 -0.32
35 AT2G10400 transposable element gene 0.62 0.31 -0.32
36 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 0.62 0.32 -0.33
37 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein 0.62 0.3 -0.33
38 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.62 0.3 -0.32
39 AT2G32750 Exostosin family protein 0.62 0.31 -0.32
40 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 0.62 0.3 -0.31
41 AT2G37140 Terpenoid synthases superfamily protein 0.62 0.32 -0.32
42 AT2G21000 transposable element gene 0.61 0.33 -0.31
43 AT3G53390 Transducin/WD40 repeat-like superfamily protein -0.61 0.34 -0.3
44 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 0.61 0.33 -0.3
45 AT3G45990 Cofilin/tropomyosin-type actin-binding protein family 0.61 0.32 -0.33
46 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.61 0.3 -0.31
47 AT2G01780 Curculin-like (mannose-binding) lectin family protein 0.61 0.3 -0.31
48 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.3 -0.33
49 AT2G28960 Leucine-rich repeat protein kinase family protein 0.61 0.31 -0.31
50 AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.61 0.32 -0.3
51 AT5G50020 DHHC-type zinc finger family protein 0.61 0.3 -0.31
52 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.31 -0.31
53 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.31 -0.31
54 AT1G21430 Flavin-binding monooxygenase family protein YUC11 -0.6 0.32 -0.32
55 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.6 0.33 -0.3
56 AT1G36000 LOB domain-containing protein 5 LOB domain-containing protein 5 0.6 0.31 -0.32
57 AT4G18920 Protein of unknown function (DUF1264) 0.6 0.3 -0.32
58 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 -0.6 0.28 -0.33
59 AT2G20550 HSP40/DnaJ peptide-binding protein 0.6 0.28 -0.32
60 AT2G30690 Protein of unknown function, DUF593 0.59 0.31 -0.29
61 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.59 0.33 -0.31
62 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.29 -0.32
63 AT2G04300 Leucine-rich repeat protein kinase family protein 0.59 0.33 -0.33
64 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 0.59 0.31 -0.3
65 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.59 0.33 -0.32
66 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.59 0.32 -0.32
67 AT1G23880 NHL domain-containing protein -0.59 0.32 -0.32
68 AT4G05140 Nucleoside transporter family protein 0.59 0.33 -0.33
69 AT3G42980 transposable element gene 0.59 0.3 -0.31
70 AT4G07460 transposable element gene 0.59 0.33 -0.32
71 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.59 0.31 -0.32
72 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.33 -0.34
73 AT1G46696 Protein of unknown function, DUF601 0.59 0.34 -0.3
74 AT5G42140 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.59 0.31 -0.33
75 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.59 0.3 -0.29
76 AT5G14860 UDP-Glycosyltransferase superfamily protein 0.59 0.31 -0.33
77 AT5G26230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 membrane-associated kinase
regulator 1		 0.59 0.33 -0.3
78 AT4G30410 sequence-specific DNA binding transcription factors 0.58 0.33 -0.3
79 AT3G19020 Leucine-rich repeat (LRR) family protein 0.58 0.32 -0.31
80 AT2G20210 RNI-like superfamily protein 0.58 0.31 -0.31
81 AT1G02740 MRG family protein 0.58 0.33 -0.32
82 AT3G16120 Dynein light chain type 1 family protein 0.58 0.31 -0.32
83 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 0.58 0.32 -0.32
84 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.29 -0.32
85 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 -0.58 0.31 -0.32
86 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 -0.58 0.3 -0.31
87 AT4G10780 LRR and NB-ARC domains-containing disease resistance
protein		 0.58 0.3 -0.31
88 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.58 0.32 -0.33
89 AT1G51990 O-methyltransferase family protein -0.58 0.34 -0.32
90 AT2G14690 Glycosyl hydrolase superfamily protein 0.58 0.31 -0.32
91 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI -0.57 0.35 -0.31
92 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein -0.57 0.34 -0.3
93 AT3G01430 BEST Arabidopsis thaliana protein match is: NHL
domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast
hits to 98 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.31
94 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.33 -0.32
95 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 -0.56 0.31 -0.33
96 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 -0.56 0.32 -0.31
97 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.56 0.3 -0.31
98 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.31
99 AT5G02920 F-box/RNI-like superfamily protein -0.56 0.31 -0.29
100 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.56 0.33 -0.31
101 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.55 0.34 -0.28
102 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.3 -0.31
103 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.53 0.32 -0.35
104 AT5G25270 Ubiquitin-like superfamily protein -0.53 0.32 -0.33
105 AT4G14820 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.75 0.49 -0.51 C0247
107 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		0.73 0.49 -0.49 C0199
108 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.7 0.52 -0.47 C0085
109 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.7 0.51 -0.49 C0251
110 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		0.67 0.49 -0.5 C0208
111 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.61 0.33 -0.33
112 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		-0.53 0.31 -0.33 C0060