AGICode | AT5G25120 |
Description | ytochrome p450, family 71, subfamily B, polypeptide 11 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G25120 | ytochrome p450, family 71, subfamily B, polypeptide 11 | ytochrome p450, family 71, subfamily B, polypeptide 11 |
1 | 0.32 | -0.33 | ||
2 | AT1G56450 | 20S proteasome beta subunit G1 | 20S proteasome beta subunit G1 | -0.7 | 0.31 | -0.32 | ||
3 | AT1G45000 | AAA-type ATPase family protein | -0.64 | 0.31 | -0.31 | |||
4 | AT1G28200 | FH interacting protein 1 | FH interacting protein 1 | -0.62 | 0.31 | -0.31 | ||
5 | AT1G05900 | endonuclease III 2 | ATNTH2, endonuclease III 2 | -0.61 | 0.29 | -0.33 | ||
6 | AT4G31590 | Cellulose-synthase-like C5 | CELLULOSE-SYNTHASE LIKE C5, Cellulose-synthase-like C5, CELLULOSE-SYNTHASE LIKE C5, Cellulose-synthase-like C5 |
-0.61 | 0.31 | -0.31 | ||
7 | AT5G06580 | FAD-linked oxidases family protein | -0.61 | 0.33 | -0.32 | |||
8 | AT4G20070 | allantoate amidohydrolase | allantoate amidohydrolase, allantoate amidohydrolase |
-0.61 | 0.31 | -0.3 | ||
9 | AT4G22580 | Exostosin family protein | -0.6 | 0.31 | -0.3 | |||
10 | AT3G20870 | ZIP metal ion transporter family | zinc transporter 29 | -0.6 | 0.32 | -0.3 | ||
11 | AT3G58460 | RHOMBOID-like protein 15 | RHOMBOID-like protein 15, RHOMBOID-like protein 15 |
-0.59 | 0.34 | -0.33 | ||
12 | AT5G34940 | glucuronidase 3 | glucuronidase 3, glucuronidase 3 | 0.59 | 0.31 | -0.29 | ||
13 | AT5G20060 | alpha/beta-Hydrolases superfamily protein | -0.59 | 0.33 | -0.32 | |||
14 | AT1G71410 | ARM repeat superfamily protein | -0.59 | 0.31 | -0.33 | |||
15 | AT5G16290 | VALINE-TOLERANT 1 | VALINE-TOLERANT 1 | -0.59 | 0.35 | -0.3 | ||
16 | AT5G36290 | Uncharacterized protein family (UPF0016) | -0.59 | 0.31 | -0.34 | |||
17 | AT5G60250 | zinc finger (C3HC4-type RING finger) family protein | 0.59 | 0.33 | -0.29 | |||
18 | AT2G41020 | WW domain-containing protein | -0.59 | 0.32 | -0.3 | |||
19 | AT2G20250 | unknown protein; Has 10 Blast hits to 10 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.32 | -0.31 | |||
20 | AT3G60690 | SAUR-like auxin-responsive protein family | 0.58 | 0.32 | -0.31 | |||
21 | AT2G39550 | Prenyltransferase family protein | GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT, GGB, PGGT-I |
-0.58 | 0.32 | -0.33 | ||
22 | AT5G63440 | Protein of unknown function (DUF167) | -0.58 | 0.3 | -0.33 | |||
23 | AT4G23870 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.3 | -0.31 | |||
24 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
0.57 | 0.32 | -0.34 | ||
25 | AT3G11200 | alfin-like 2 | alfin-like 2 | -0.57 | 0.31 | -0.33 | ||
26 | AT5G03415 | Transcription factor DP | ATDPB, DPB | -0.57 | 0.31 | -0.31 | ||
27 | AT3G30740 | 40S ribosomal protein S25 (RPS25C), pseudogene, similar to GB:P46301 GI:1173234 40S RIBOSOMAL PROTEIN S25 from (Lycopersicon esculentum); blastp match of 75% identity and 7.2e-09 P-value to SP|P46301|RS25_LYCES 40S ribosomal protein S25. (Tomato) {Lycopersicon esculentum} |
-0.57 | 0.31 | -0.31 | |||
28 | AT5G07880 | synaptosomal-associated protein SNAP25-like 29 | ARABIDOPSIS THALIANA SYNAPTOSOMAL-ASSOCIATED PROTEIN SNAP25-LIKE 29, synaptosomal-associated protein SNAP25-like 29 |
0.57 | 0.3 | -0.31 | ||
29 | AT2G43190 | ribonuclease P family protein | -0.57 | 0.31 | -0.3 | |||
30 | AT4G34350 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CHLOROPLAST BIOGENESIS 6, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, ISPH |
-0.56 | 0.27 | -0.34 | ||
31 | AT1G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
32 | AT5G18580 | tonneau 2 (TON2) | EMBRYO DEFECTIVE 40, FASS 1, FASS 2, FS1, GORDO, TONNEAU 2 |
-0.56 | 0.33 | -0.31 | ||
33 | AT5G45500 | RNI-like superfamily protein | 0.56 | 0.33 | -0.31 | |||
34 | AT4G25280 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.32 | -0.33 | |||
35 | AT3G45730 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.3 | |||
36 | AT4G12590 | Protein of unknown function DUF106, transmembrane | -0.56 | 0.33 | -0.31 | |||
37 | AT4G22310 | Uncharacterised protein family (UPF0041) | -0.56 | 0.32 | -0.29 | |||
38 | AT1G31730 | Adaptin family protein | -0.56 | 0.33 | -0.3 | |||
39 | AT5G05070 | DHHC-type zinc finger family protein | -0.56 | 0.32 | -0.3 | |||
40 | AT5G58940 | calmodulin-binding receptor-like cytoplasmic kinase 1 | calmodulin-binding receptor-like cytoplasmic kinase 1 |
0.55 | 0.32 | -0.32 | ||
41 | AT5G46750 | ARF-GAP domain 9 | ARF-GAP domain 9 | -0.55 | 0.34 | -0.3 | ||
42 | AT4G17420 | Tryptophan RNA-binding attenuator protein-like | -0.55 | 0.3 | -0.31 | |||
43 | AT5G27650 | Tudor/PWWP/MBT superfamily protein | -0.55 | 0.29 | -0.31 | |||
44 | AT5G03530 | RAB GTPase homolog C2A | ATRAB, ATRAB ALPHA, ATRAB18B, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG C2A, RAB GTPase homolog C2A |
-0.55 | 0.33 | -0.34 | ||
45 | AT1G03330 | Small nuclear ribonucleoprotein family protein | -0.55 | 0.32 | -0.33 | |||
46 | AT1G60090 | beta glucosidase 4 | beta glucosidase 4 | 0.55 | 0.32 | -0.3 | ||
47 | AT5G11410 | Protein kinase superfamily protein | 0.55 | 0.3 | -0.32 | |||
48 | AT2G26810 | Putative methyltransferase family protein | -0.55 | 0.34 | -0.31 | |||
49 | AT1G74300 | alpha/beta-Hydrolases superfamily protein | 0.55 | 0.32 | -0.32 | |||
50 | AT2G18450 | succinate dehydrogenase 1-2 | succinate dehydrogenase 1-2 | -0.54 | 0.33 | -0.32 | ||
51 | AT1G48130 | 1-cysteine peroxiredoxin 1 | 1-cysteine peroxiredoxin 1, 1-cysteine peroxiredoxin 1 |
0.54 | 0.3 | -0.31 | ||
52 | AT4G21100 | damaged DNA binding protein 1B | damaged DNA binding protein 1B | -0.54 | 0.32 | -0.35 | ||
53 | AT4G21090 | MITOCHONDRIAL FERREDOXIN 2 | ARABIDOPSIS MITOCHONDRIAL FERREDOXIN 2, MITOCHONDRIAL FERREDOXIN 2 |
-0.54 | 0.31 | -0.31 | ||
54 | AT4G19420 | Pectinacetylesterase family protein | 0.54 | 0.29 | -0.31 | |||
55 | AT1G72240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.32 | -0.31 | |||
56 | AT2G42480 | TRAF-like family protein | -0.53 | 0.34 | -0.31 | |||
57 | AT5G55370 | MBOAT (membrane bound O-acyl transferase) family protein | 0.53 | 0.29 | -0.31 | |||
58 | AT1G71910 | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.3 | |||
59 | AT4G04280 | transposable element gene | 0.53 | 0.29 | -0.3 | |||
60 | AT4G00970 | cysteine-rich RLK (RECEPTOR-like protein kinase) 41 | cysteine-rich RLK (RECEPTOR-like protein kinase) 41 |
0.52 | 0.3 | -0.33 | ||
61 | AT2G25090 | CBL-interacting protein kinase 16 | CBL-interacting protein kinase 16, SNF1-RELATED PROTEIN KINASE 3.18 |
0.52 | 0.31 | -0.33 | ||
62 | AT4G33350 | Tic22-like family protein | translocon at the inner envelope membrane of chloroplasts 22-IV, translocon at the inner envelope membrane of chloroplasts 22-IV |
-0.52 | 0.33 | -0.34 | ||
63 | AT1G31440 | SH3 domain-containing protein | -0.52 | 0.31 | -0.33 | |||
64 | AT2G28370 | Uncharacterised protein family (UPF0497) | -0.52 | 0.34 | -0.32 | |||
65 | AT2G38020 | vacuoleless1 (VCL1) | EMB258, MANGLED, VACUOLELESS 1 | -0.52 | 0.32 | -0.31 | ||
66 | AT3G57510 | Pectin lyase-like superfamily protein | ADPG1 | -0.52 | 0.33 | -0.32 | ||
67 | AT3G07640 | unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.32 | -0.34 | |||
68 | AT3G01850 | Aldolase-type TIM barrel family protein | -0.52 | 0.32 | -0.31 | |||
69 | AT5G62770 | Protein of unknown function (DUF1645) | 0.52 | 0.33 | -0.31 | |||
70 | AT4G17510 | ubiquitin C-terminal hydrolase 3 | ubiquitin C-terminal hydrolase 3 | -0.51 | 0.31 | -0.32 | ||
71 | AT1G73650 | Protein of unknown function (DUF1295) | -0.51 | 0.31 | -0.32 | |||
72 | AT5G27430 | Signal peptidase subunit | -0.51 | 0.34 | -0.3 | |||
73 | AT3G59800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). |
-0.51 | 0.31 | -0.33 | |||
74 | AT3G50520 | Phosphoglycerate mutase family protein | -0.51 | 0.33 | -0.3 | |||
75 | AT3G47240 | transposable element gene | 0.51 | 0.32 | -0.32 | |||
76 | AT1G59750 | auxin response factor 1 | auxin response factor 1 | -0.51 | 0.32 | -0.32 | ||
77 | AT3G28150 | TRICHOME BIREFRINGENCE-LIKE 22 | ALTERED XYLOGLUCAN 4-LIKE, TRICHOME BIREFRINGENCE-LIKE 22 |
0.51 | 0.34 | -0.32 | ||
78 | AT1G37057 | transposable element gene | 0.51 | 0.31 | -0.33 | |||
79 | AT5G24400 | NagB/RpiA/CoA transferase-like superfamily protein | EMBRYO DEFECTIVE 2024, 6-PHOSPHOGLUCONOLACTONASE 3 |
-0.51 | 0.32 | -0.32 | ||
80 | AT5G23570 | XS domain-containing protein / XS zinc finger domain-containing protein-related |
SUPPRESSOR OF GENE SILENCING 3, SUPPRESSOR OF GENE SILENCING 3 |
0.51 | 0.31 | -0.3 | ||
81 | AT1G06500 | unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.31 | -0.31 | |||
82 | AT2G44050 | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase |
COI1 SUPPRESSOR1, coronatine insensitive1 suppressor |
-0.51 | 0.33 | -0.31 | ||
83 | AT5G64450 | BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
84 | AT1G25410 | isopentenyltransferase 6 | ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 6, isopentenyltransferase 6 |
0.49 | 0.31 | -0.31 | ||
85 | AT5G02200 | far-red-elongated hypocotyl1-like | far-red-elongated hypocotyl1-like | 0.49 | 0.31 | -0.34 | ||
86 | AT4G25200 | mitochondrion-localized small heat shock protein 23.6 | mitochondrion-localized small heat shock protein 23.6, mitochondrion-localized small heat shock protein 23.6 |
0.48 | 0.31 | -0.32 | ||
87 | AT3G18360 | VQ motif-containing protein | 0.47 | 0.32 | -0.31 | |||
88 | AT3G12830 | SAUR-like auxin-responsive protein family | 0.47 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
89 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.75 | 0.46 | -0.44 | ||
90 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.7 | 0.44 | -0.46 | ||
91 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
-0.67 | 0.45 | -0.43 | ||
92 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.64 | 0.43 | -0.43 | ||
93 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
-0.59 | 0.32 | -0.31 | ||
94 | C0229 | Robinin | - | - | flavone biosynthesis | -0.57 | 0.47 | -0.46 |