AGICode | AT5G67350 |
Description | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G67350 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.3 | -0.32 | |||
2 | AT1G65620 | Lateral organ boundaries (LOB) domain family protein | ASYMMETRIC LEAVES 2 | 0.69 | 0.3 | -0.31 | ||
3 | AT3G03170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.34 | -0.3 | |||
4 | AT5G62070 | IQ-domain 23 | IQ-domain 23 | 0.67 | 0.31 | -0.33 | ||
5 | AT5G50260 | Cysteine proteinases superfamily protein | cysteine endopeptidase 1 | -0.67 | 0.3 | -0.33 | ||
6 | AT1G62960 | ACC synthase 10 | ACC synthase 10 | 0.66 | 0.33 | -0.33 | ||
7 | AT3G18420 | Protein prenylyltransferase superfamily protein | 0.64 | 0.32 | -0.33 | |||
8 | AT1G57850 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.63 | 0.32 | -0.31 | |||
9 | AT1G62180 | 5'adenylylphosphosulfate reductase 2 | 5'adenylylphosphosulfate reductase 2, ADENOSINE-5'-PHOSPHOSULFATE REDUCTASE, ATAPR2, PRH, 3'-PHOSPHOADENOSINE-5'-PHOSPHOSULF ATE (PAPS) REDUCTASE HOMOLOG 43 |
0.61 | 0.31 | -0.32 | ||
10 | AT4G14965 | membrane-associated progesterone binding protein 4 | membrane-associated progesterone binding protein 4, membrane-associated progesterone binding protein 4 |
0.61 | 0.34 | -0.33 | ||
11 | AT3G57785 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.6 | 0.32 | -0.31 | |||
12 | AT4G00200 | AT hook motif DNA-binding family protein | -0.6 | 0.32 | -0.32 | |||
13 | AT5G55090 | mitogen-activated protein kinase kinase kinase 15 | mitogen-activated protein kinase kinase kinase 15 |
0.6 | 0.33 | -0.33 | ||
14 | AT3G46530 | NB-ARC domain-containing disease resistance protein | RECOGNITION OF PERONOSPORA PARASITICA 13 |
0.6 | 0.31 | -0.31 | ||
15 | AT1G50400 | Eukaryotic porin family protein | 0.59 | 0.33 | -0.3 | |||
16 | AT2G47270 | sequence-specific DNA binding transcription factors;transcription regulators |
UPBEAT1 | -0.59 | 0.34 | -0.31 | ||
17 | AT1G70080 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
0.59 | 0.34 | -0.35 | |||
18 | AT4G10990 | transposable element gene | 0.59 | 0.32 | -0.3 | |||
19 | AT4G36710 | GRAS family transcription factor | Arabidopsis thaliana HAIRY MERISTEM 4, HAM4 |
0.58 | 0.3 | -0.32 | ||
20 | AT4G03870 | transposable element gene | 0.58 | 0.3 | -0.32 | |||
21 | AT1G70000 | myb-like transcription factor family protein | 0.58 | 0.3 | -0.32 | |||
22 | AT3G10010 | demeter-like 2 | demeter-like 2 | 0.56 | 0.32 | -0.31 | ||
23 | AT2G04070 | MATE efflux family protein | 0.56 | 0.31 | -0.33 | |||
24 | AT3G57330 | autoinhibited Ca2+-ATPase 11 | autoinhibited Ca2+-ATPase 11 | 0.56 | 0.32 | -0.31 | ||
25 | AT1G22760 | poly(A) binding protein 3 | poly(A) binding protein 3 | 0.55 | 0.32 | -0.3 | ||
26 | AT3G04460 | peroxin-12 | ABERRANT PEROXISOME MORPHOLOGY 4, PEROXIN-12, peroxin-12 |
0.55 | 0.34 | -0.31 | ||
27 | AT4G37650 | GRAS family transcription factor | SHOOT GRAVITROPISM 7, SHORT ROOT | -0.54 | 0.32 | -0.31 | ||
28 | AT1G12040 | leucine-rich repeat/extensin 1 | leucine-rich repeat/extensin 1 | -0.53 | 0.33 | -0.3 | ||
29 | AT3G62100 | indole-3-acetic acid inducible 30 | indole-3-acetic acid inducible 30 | -0.53 | 0.31 | -0.33 | ||
30 | AT2G34650 | Protein kinase superfamily protein | ABRUPTUS, PINOID | -0.53 | 0.31 | -0.34 | ||
31 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
0.53 | 0.31 | -0.3 | ||
32 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.53 | 0.33 | -0.3 | ||
33 | AT5G57950 | 26S proteasome regulatory subunit, putative | 0.52 | 0.33 | -0.3 | |||
34 | AT5G39220 | alpha/beta-Hydrolases superfamily protein | 0.52 | 0.31 | -0.3 | |||
35 | AT5G42230 | serine carboxypeptidase-like 41 | serine carboxypeptidase-like 41 | -0.52 | 0.33 | -0.31 | ||
36 | AT3G24770 | CLAVATA3/ESR-RELATED 41 | CLAVATA3/ESR-RELATED 41 | 0.52 | 0.32 | -0.34 | ||
37 | AT2G40580 | Protein kinase superfamily protein | 0.51 | 0.3 | -0.35 | |||
38 | AT2G02360 | phloem protein 2-B10 | phloem protein 2-B10, phloem protein 2-B10 |
0.51 | 0.3 | -0.34 | ||
39 | AT1G22620 | Phosphoinositide phosphatase family protein | suppressor of actin 1 | 0.51 | 0.32 | -0.33 | ||
40 | AT3G50610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
0.5 | 0.32 | -0.31 | |||
41 | AT5G07560 | glycine-rich protein 20 | ATGRP20, glycine-rich protein 20 | 0.5 | 0.31 | -0.31 | ||
42 | AT5G05050 | Cysteine proteinases superfamily protein | 0.5 | 0.33 | -0.33 | |||
43 | AT4G08590 | ORTHRUS-like | ORTH-LIKE 1, ORTHRUS-LIKE 1, ORTHRUS-like, VARIANT IN METHYLATION 6 |
-0.5 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
44 | C0251 | Sulfoquinovosyldiacylglycerol-36:6 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.73 | 0.5 | -0.48 | ||
45 | C0247 | Sulfoquinovosyldiacylglycerol-34:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.72 | 0.47 | -0.49 | ||
46 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.72 | 0.46 | -0.44 | ||
47 | C0267 | Zeatin | cis-Zeatin | cis-Zeatin | cytokinins-O-glucoside biosynthesis, cytokinins degradation, cytokinins 7-N-glucoside biosynthesis, cytokinins 9-N-glucoside biosynthesis, cis-zeatin biosynthesis |
-0.72 | 0.44 | -0.46 | ||
48 | C0085 | Digalactosyldiacylglycerol-36:6 | - | Digalactosyldiacylglycerol-36:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.7 | 0.5 | -0.5 | ||
49 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.7 | 0.45 | -0.43 | ||
50 | C0084 | Digalactosyldiacylglycerol-36:5 | - | Digalactosyldiacylglycerol-36:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.7 | 0.5 | -0.48 | ||
51 | C0208 | Phosphatidylinositol-34:2 | - | Phosphatidylinositol-34:2 | 3-phosphoinositide biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, sphingolipid biosynthesis, linoleate biosynthesis I, cutin biosynthesis, glycerophosphodiester degradation, phosphate acquisition, glutathione redox reactions I |
-0.69 | 0.52 | -0.5 | ||
52 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
-0.69 | 0.44 | -0.44 | ||
53 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.67 | 0.44 | -0.48 | ||
54 | C0103 | Glutaric acid | - | - | - | -0.66 | 0.43 | -0.46 | ||
55 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | -0.65 | 0.43 | -0.45 | ||
56 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
-0.65 | 0.45 | -0.44 | ||
57 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.64 | 0.41 | -0.44 | ||
58 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.63 | 0.43 | -0.44 | ||
59 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.61 | 0.46 | -0.45 | ||
60 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.61 | 0.43 | -0.42 | ||
61 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.6 | 0.47 | -0.41 | ||
62 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.59 | 0.43 | -0.42 | ||
63 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
-0.59 | 0.43 | -0.46 |