AT5G65410 : ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25
Query Information
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AGICode AT5G65410
Description homeobox protein 25
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G65410 homeobox protein 25 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 25, homeobox protein 25,
ZINC FINGER HOMEODOMAIN 2, ZINC
FINGER HOMEODOMAIN 1		 1 0.32 -0.33
2 AT4G34220 Leucine-rich repeat protein kinase family protein 0.91 0.31 -0.31
3 AT1G14440 homeobox protein 31 homeobox protein 31, homeobox
protein 31, ZINC FINGER
HOMEODOMAIN 4		 0.9 0.31 -0.32 IPI
4 AT4G04890 protodermal factor 2 protodermal factor 2 0.88 0.32 -0.31
5 AT5G18460 Protein of Unknown Function (DUF239) 0.88 0.31 -0.3
6 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.88 0.3 -0.3
7 AT3G04290 Li-tolerant lipase 1 ATLTL1, Li-tolerant lipase 1 0.88 0.3 -0.31
8 AT5G06750 Protein phosphatase 2C family protein -0.87 0.32 -0.32
9 AT3G08600 Protein of unknown function (DUF1191) 0.87 0.31 -0.32
10 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.87 0.3 -0.33
11 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.87 0.3 -0.32
12 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 0.86 0.34 -0.32
13 AT1G72970 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 embryo sac development arrest 17,
HOTHEAD		 0.86 0.32 -0.33
14 AT5G08000 glucan endo-1,3-beta-glucosidase-like protein 3 glucan
endo-1,3-beta-glucosidase-like
protein 3, PLASMODESMATA
CALLOSE-BINDING PROTEIN 2		 0.86 0.31 -0.32
15 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.85 0.31 -0.29
16 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.32 -0.33
17 AT4G37080 Protein of unknown function, DUF547 0.85 0.3 -0.29
18 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 0.85 0.32 -0.29
19 AT1G50280 Phototropic-responsive NPH3 family protein 0.84 0.32 -0.32
20 AT3G16290 AAA-type ATPase family protein embryo defective 2083 0.84 0.32 -0.33
21 AT1G68780 RNI-like superfamily protein 0.84 0.32 -0.33
22 AT3G61310 AT hook motif DNA-binding family protein 0.84 0.32 -0.33
23 AT4G12800 photosystem I subunit l photosystem I subunit l 0.84 0.33 -0.3
24 AT3G15680 Ran BP2/NZF zinc finger-like superfamily protein 0.84 0.32 -0.32
25 AT1G09750 Eukaryotic aspartyl protease family protein 0.83 0.31 -0.31
26 AT1G14840 microtubule-associated proteins 70-4 microtubule-associated proteins
70-4, microtubule-associated
proteins 70-4		 0.83 0.33 -0.32
27 AT3G61550 RING/U-box superfamily protein 0.83 0.31 -0.3
28 AT4G28780 GDSL-like Lipase/Acylhydrolase superfamily protein 0.83 0.32 -0.31
29 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.83 0.33 -0.31
30 AT4G18970 GDSL-like Lipase/Acylhydrolase superfamily protein 0.83 0.34 -0.32
31 AT4G29030 Putative membrane lipoprotein 0.83 0.31 -0.3
32 AT1G21810 Plant protein of unknown function (DUF869) 0.83 0.31 -0.31
33 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.82 0.34 -0.32
34 AT5G19170 Protein of Unknown Function (DUF239) 0.82 0.32 -0.31
35 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.82 0.3 -0.32
36 AT3G13560 O-Glycosyl hydrolases family 17 protein 0.82 0.28 -0.33
37 AT4G18360 Aldolase-type TIM barrel family protein -0.82 0.33 -0.31
38 AT2G26900 Sodium Bile acid symporter family bile acid:sodium symporter family
protein 2		 0.81 0.33 -0.32
39 AT1G60800 NSP-interacting kinase 3 NSP-interacting kinase 3 0.81 0.32 -0.33
40 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.81 0.29 -0.34
41 AT4G35920 PLAC8 family protein mid1-complementing activity 1 0.81 0.31 -0.31
42 AT4G03210 xyloglucan endotransglucosylase/hydrolase 9 xyloglucan
endotransglucosylase/hydrolase 9		 0.81 0.31 -0.32
43 AT3G15030 TCP family transcription factor 4 maternal effect embryo arrest 35,
TCP family transcription factor 4		 0.81 0.34 -0.31
44 AT1G14180 RING/U-box superfamily protein 0.81 0.32 -0.32
45 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 0.81 0.32 -0.32
46 AT1G25450 3-ketoacyl-CoA synthase 5 ECERIFERUM 60, 3-ketoacyl-CoA
synthase 5		 0.81 0.32 -0.31
47 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.81 0.29 -0.33
48 AT3G17640 Leucine-rich repeat (LRR) family protein 0.81 0.3 -0.35
49 AT1G49730 Protein kinase superfamily protein 0.81 0.31 -0.3
50 AT4G19070 Putative membrane lipoprotein 0.81 0.34 -0.3
51 AT2G45190 Plant-specific transcription factor YABBY family protein ABNORMAL FLORAL ORGANS,
FILAMENTOUS FLOWER, YABBY1		 0.81 0.3 -0.34
52 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.8 0.31 -0.34
53 AT1G02800 cellulase 2 cellulase 2, CEL2, cellulase 2 0.8 0.33 -0.34
54 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.8 0.32 -0.32
55 AT1G48480 receptor-like kinase 1 receptor-like kinase 1 0.8 0.3 -0.33
56 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 0.8 0.3 -0.3
57 AT2G30890 Cytochrome b561/ferric reductase transmembrane protein
family		 0.8 0.32 -0.33
58 AT5G20740 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.8 0.31 -0.31
59 AT3G49260 IQ-domain 21 IQ-domain 21 0.8 0.32 -0.33
60 AT3G44020 thylakoid lumenal P17.1 protein 0.8 0.34 -0.3
61 AT4G38950 ATP binding microtubule motor family protein 0.8 0.33 -0.32
62 AT4G12970 stomagen EPFL9, STOMAGEN 0.8 0.31 -0.3
63 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.79 0.31 -0.32
64 AT1G29195 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, 4 leaf senescence
stage, petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.79 0.31 -0.32
65 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.34 -0.29
66 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.78 0.31 -0.33
67 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.78 0.3 -0.32
68 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.78 0.3 -0.32
69 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.77 0.31 -0.29
70 AT1G51420 sucrose-phosphatase 1 SUCROSE-PHOSPHATASE 1,
sucrose-phosphatase 1		 -0.77 0.3 -0.33
71 AT3G21770 Peroxidase superfamily protein -0.77 0.29 -0.31
72 AT5G51500 Plant invertase/pectin methylesterase inhibitor superfamily -0.77 0.29 -0.31
73 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.31 -0.33
74 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.77 0.31 -0.31
75 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.76 0.31 -0.32
76 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.76 0.31 -0.3
77 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.76 0.32 -0.3
78 AT1G11580 methylesterase PCR A ATPMEPCRA, methylesterase PCR A -0.75 0.32 -0.32
79 AT1G23040 hydroxyproline-rich glycoprotein family protein -0.75 0.32 -0.31
80 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.74 0.32 -0.3
81 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.74 0.31 -0.32
82 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.73 0.32 -0.32
83 AT3G26590 MATE efflux family protein -0.73 0.33 -0.31
84 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.73 0.31 -0.31
85 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.73 0.31 -0.32
86 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.73 0.32 -0.31
87 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.72 0.32 -0.32
88 AT5G54800 glucose 6-phosphate/phosphate translocator 1 ARABIDOPSIS GLUCOSE
6-PHOSPHATE/PHOSPHATE TRANSLOCATOR
1, glucose 6-phosphate/phosphate
translocator 1		 -0.72 0.29 -0.32
89 AT1G09560 germin-like protein 5 germin-like protein 5 -0.72 0.31 -0.34
90 AT5G44380 FAD-binding Berberine family protein -0.71 0.32 -0.33
91 AT4G12130 Glycine cleavage T-protein family -0.71 0.3 -0.31
92 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.71 0.31 -0.32
93 AT2G23170 Auxin-responsive GH3 family protein GH3.3 -0.71 0.31 -0.28
94 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.71 0.31 -0.28
95 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.7 0.33 -0.3
96 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 -0.7 0.31 -0.31
97 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.32 -0.31
98 AT1G05577 Domain of unknown function (DUF966) -0.7 0.31 -0.3
99 AT5G49880 mitotic checkpoint family protein -0.7 0.31 -0.3
100 AT3G48170 aldehyde dehydrogenase 10A9 aldehyde dehydrogenase 10A9 -0.7 0.32 -0.33
101 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.7 0.33 -0.31
102 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 -0.7 0.31 -0.32
103 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.7 0.32 -0.32
104 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 -0.69 0.32 -0.32
105 AT5G13010 RNA helicase family protein embryo defective 3011 -0.69 0.33 -0.33
106 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 -0.69 0.34 -0.32
107 AT1G65980 thioredoxin-dependent peroxidase 1 thioredoxin-dependent peroxidase 1 -0.69 0.32 -0.31
108 AT2G22470 arabinogalactan protein 2 arabinogalactan protein 2, ATAGP2 -0.69 0.29 -0.33
109 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.69 0.3 -0.33
110 AT2G46740 D-arabinono-1,4-lactone oxidase family protein -0.69 0.31 -0.32
111 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 -0.69 0.29 -0.32
112 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.69 0.3 -0.32
113 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.69 0.31 -0.31
114 AT5G01830 ARM repeat superfamily protein -0.69 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.84 0.47 -0.41 C0220
116 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.79 0.46 -0.44 C0120
117 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.71 0.44 -0.43