AT5G63200 : -
Query Information
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AGICode AT5G63200
Description tetratricopeptide repeat (TPR)-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 1 0.32 -0.32
2 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 -0.79 0.32 -0.31
3 AT5G41520 RNA binding Plectin/S10 domain-containing protein -0.77 0.29 -0.3
4 AT1G18540 Ribosomal protein L6 family protein -0.76 0.36 -0.32
5 AT2G39390 Ribosomal L29 family protein -0.76 0.31 -0.34
6 AT1G73240 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup
(InterPro:IPR019049); Has 36 Blast hits to 36 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.31 -0.32
7 AT3G47370 Ribosomal protein S10p/S20e family protein -0.74 0.33 -0.31
8 AT5G27770 Ribosomal L22e protein family -0.74 0.33 -0.31
9 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 -0.73 0.33 -0.32
10 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 -0.73 0.32 -0.31
11 AT4G38710 glycine-rich protein -0.72 0.33 -0.32
12 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.72 0.3 -0.31
13 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 -0.72 0.32 -0.32
14 AT5G57290 60S acidic ribosomal protein family -0.72 0.31 -0.32
15 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.32 -0.31
16 AT2G44120 Ribosomal protein L30/L7 family protein -0.71 0.31 -0.34
17 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.71 0.32 -0.32
18 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 -0.71 0.33 -0.31
19 AT4G31985 Ribosomal protein L39 family protein -0.71 0.32 -0.33
20 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 -0.71 0.32 -0.31
21 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 -0.71 0.3 -0.3
22 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.71 0.31 -0.32
23 AT5G56670 Ribosomal protein S30 family protein -0.71 0.31 -0.31
24 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.32 -0.32
25 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 -0.7 0.31 -0.29
26 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 -0.7 0.31 -0.31
27 AT5G19980 golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter
4		 -0.7 0.32 -0.32
28 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 -0.7 0.33 -0.33
29 AT4G36650 plant-specific TFIIB-related protein plant-specific TFIIB-related
protein, plant-specific
TFIIB-related protein		 0.7 0.32 -0.32
30 AT5G65650 Protein of unknown function (DUF1195) -0.7 0.33 -0.31
31 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.7 0.3 -0.3
32 AT1G15250 Zinc-binding ribosomal protein family protein -0.69 0.31 -0.32
33 AT3G07230 wound-responsive protein-related -0.69 0.3 -0.3
34 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.69 0.3 -0.31
35 AT2G46040 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.69 0.32 -0.32
36 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 -0.69 0.3 -0.3
37 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.69 0.31 -0.31
38 AT2G32220 Ribosomal L27e protein family -0.69 0.3 -0.34
39 AT4G38350 Patched family protein 0.69 0.33 -0.32
40 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB -0.69 0.31 -0.31
41 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 -0.69 0.32 -0.31
42 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 -0.69 0.31 -0.33
43 AT4G15770 RNA binding -0.69 0.32 -0.32
44 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 -0.69 0.31 -0.31
45 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 -0.69 0.32 -0.34
46 AT5G61770 PETER PAN-like protein PETER PAN-like protein -0.69 0.32 -0.31
47 AT3G13230 RNA-binding KH domain-containing protein -0.69 0.33 -0.31
48 AT3G04920 Ribosomal protein S24e family protein -0.68 0.3 -0.33
49 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 -0.68 0.31 -0.31
50 AT1G54770 Fcf2 pre-rRNA processing protein -0.68 0.32 -0.34
51 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 -0.68 0.31 -0.32
52 AT1G34020 Nucleotide-sugar transporter family protein -0.68 0.3 -0.33
53 AT2G42710 Ribosomal protein L1p/L10e family -0.68 0.3 -0.31
54 AT4G29070 Phospholipase A2 family protein 0.68 0.29 -0.32
55 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 -0.68 0.32 -0.31
56 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.68 0.32 -0.33
57 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 0.68 0.3 -0.31
58 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein -0.68 0.3 -0.31
59 AT3G16180 Major facilitator superfamily protein -0.68 0.29 -0.3
60 AT2G39450 Cation efflux family protein ATMTP11, MTP11 0.68 0.31 -0.32
61 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.68 0.33 -0.31
62 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 -0.67 0.31 -0.32
63 AT1G66070 Translation initiation factor eIF3 subunit -0.67 0.36 -0.3
64 AT1G69620 ribosomal protein L34 ribosomal protein L34 -0.67 0.29 -0.32
65 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.29 -0.32
66 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.67 0.32 -0.3
67 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 0.67 0.32 -0.31
68 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.67 0.31 -0.31
69 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 -0.67 0.31 -0.29
70 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 0.67 0.33 -0.3
71 AT4G01220 Nucleotide-diphospho-sugar transferase family protein male gametophyte defective 4 -0.67 0.3 -0.32
72 AT3G09820 adenosine kinase 1 adenosine kinase 1, ATADK1 -0.67 0.31 -0.3
73 AT4G32160 Phox (PX) domain-containing protein 0.67 0.3 -0.31
74 AT2G33845 Nucleic acid-binding, OB-fold-like protein -0.67 0.3 -0.34
75 AT5G23300 pyrimidine d pyrimidine d -0.67 0.3 -0.33
76 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.31
77 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.67 0.31 -0.31
78 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.66 0.33 -0.31
79 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 -0.66 0.29 -0.3
80 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.66 0.33 -0.29
81 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 -0.66 0.3 -0.33
82 AT5G41685 Mitochondrial outer membrane translocase complex, subunit
Tom7		 -0.66 0.31 -0.33
83 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 -0.66 0.3 -0.33
84 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.66 0.33 -0.33
85 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.66 0.3 -0.32
86 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.66 0.32 -0.33
87 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.66 0.33 -0.34
88 AT2G37400 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.31
89 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 -0.66 0.32 -0.28
90 AT5G07090 Ribosomal protein S4 (RPS4A) family protein -0.66 0.34 -0.31
91 AT5G44450 methyltransferases -0.66 0.3 -0.31
92 AT1G50920 Nucleolar GTP-binding protein -0.66 0.34 -0.31
93 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.29 -0.32
94 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 0.66 0.29 -0.3
95 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase -0.66 0.32 -0.32
96 AT2G32390 glutamate receptor 3.5 glutamate receptor 3.5, glutamate
receptor 3.5, GLR6		 -0.66 0.32 -0.35
97 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 -0.66 0.32 -0.31
98 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 0.65 0.34 -0.31
99 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 0.64 0.32 -0.33
100 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.64 0.31 -0.31
101 AT1G33813 transposable element gene 0.64 0.31 -0.32
102 AT1G17790 DNA-binding bromodomain-containing protein 0.64 0.29 -0.32
103 AT5G39910 Pectin lyase-like superfamily protein 0.63 0.32 -0.32
104 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 0.63 0.32 -0.32
105 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 0.63 0.31 -0.33
106 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.31 -0.31
107 AT2G10465 transposable element gene 0.62 0.32 -0.3
108 AT1G21430 Flavin-binding monooxygenase family protein YUC11 0.62 0.32 -0.3
109 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.32 -0.3
110 AT5G52880 F-box family protein 0.62 0.34 -0.32
111 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.62 0.33 -0.31
112 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 0.62 0.3 -0.32
113 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.62 0.33 -0.32
114 AT3G29380 Cyclin-like family protein plant-specific TFIIB-related
protein 2		 0.62 0.32 -0.32
115 AT5G09340 Ubiquitin family protein 0.61 0.31 -0.31
116 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein 0.61 0.33 -0.31
117 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.61 0.32 -0.32
118 AT1G77240 AMP-dependent synthetase and ligase family protein 0.6 0.31 -0.33
119 AT2G20770 GCR2-like 2 GCR2-like 2 0.6 0.31 -0.32
120 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 0.6 0.3 -0.32
121 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.6 0.3 -0.31
122 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.3
123 AT2G10850 transposable element gene 0.59 0.31 -0.3
124 AT4G24020 NIN like protein 7 NIN like protein 7 0.59 0.34 -0.32
125 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.31 -0.31
126 AT3G08020 PHD finger family protein 0.59 0.31 -0.31
127 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding 0.59 0.31 -0.31
128 AT3G19380 plant U-box 25 plant U-box 25 0.58 0.32 -0.31
129 AT2G36040 transposable element gene 0.58 0.32 -0.32
130 AT4G36510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.33
131 AT5G29090 transposable element gene 0.58 0.32 -0.31
132 AT5G45160 Root hair defective 3 GTP-binding protein (RHD3) 0.58 0.33 -0.31
133 AT5G19330 ARM repeat protein interacting with ABF2 ARM repeat protein interacting
with ABF2		 0.58 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.77 0.45 -0.45 C0225
135 C0121 Isoheptylglucosinolate - - - -0.75 0.41 -0.44
136 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.73 0.42 -0.43 C0210
137 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.69 0.43 -0.43 C0031
138 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II 0.69 0.33 -0.31 C0097
139 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.68 0.47 -0.43 C0032
140 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.65 0.42 -0.46 C0107
141 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		0.64 0.33 -0.31 C0260
142 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		0.62 0.3 -0.32 C0137
143 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.59 0.3 -0.3 C0005