AGICode | AT5G61660 |
Description | glycine-rich protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G61660 | glycine-rich protein | 1 | 0.33 | -0.31 | |||
2 | AT1G14280 | phytochrome kinase substrate 2 | phytochrome kinase substrate 2 | 0.82 | 0.32 | -0.29 | ||
3 | AT3G54930 | Protein phosphatase 2A regulatory B subunit family protein | 0.81 | 0.3 | -0.33 | |||
4 | AT1G20490 | AMP-dependent synthetase and ligase family protein | -0.79 | 0.31 | -0.31 | |||
5 | AT5G15050 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.79 | 0.32 | -0.32 | |||
6 | AT4G35930 | F-box family protein | 0.79 | 0.31 | -0.29 | |||
7 | AT5G13080 | WRKY DNA-binding protein 75 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY DNA-binding protein 75 |
-0.79 | 0.32 | -0.31 | ||
8 | AT3G15480 | Protein of unknown function (DUF1218) | 0.79 | 0.31 | -0.32 | |||
9 | AT5G15020 | SIN3-like 2 | SIN3-like 2 | -0.79 | 0.31 | -0.33 | ||
10 | AT4G15340 | pentacyclic triterpene synthase 1 | 04C11, pentacyclic triterpene synthase 1, pentacyclic triterpene synthase 1 |
-0.78 | 0.33 | -0.29 | ||
11 | AT4G15330 | cytochrome P450, family 705, subfamily A, polypeptide 1 | cytochrome P450, family 705, subfamily A, polypeptide 1 |
-0.78 | 0.34 | -0.34 | ||
12 | AT5G46340 | O-acetyltransferase family protein | REDUCED WALL ACETYLATION 1 | -0.78 | 0.29 | -0.33 | ||
13 | AT2G34500 | cytochrome P450, family 710, subfamily A, polypeptide 1 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
-0.78 | 0.32 | -0.3 | ||
14 | AT5G65520 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.77 | 0.31 | -0.33 | |||
15 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.77 | 0.31 | -0.33 | |||
16 | AT4G27520 | early nodulin-like protein 2 | AtENODL2, early nodulin-like protein 2 |
0.76 | 0.33 | -0.32 | ||
17 | AT3G16570 | rapid alkalinization factor 23 | ARABIDOPSIS RAPID ALKALINIZATION FACTOR 23, rapid alkalinization factor 23 |
0.76 | 0.32 | -0.33 | ||
18 | AT1G80760 | NOD26-like intrinsic protein 6;1 | NIP6, NOD26-like intrinsic protein 6;1, NLM7 |
0.76 | 0.32 | -0.33 | ||
19 | AT3G05360 | receptor like protein 30 | receptor like protein 30, receptor like protein 30 |
-0.76 | 0.32 | -0.33 | ||
20 | AT2G42300 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.75 | 0.31 | -0.31 | |||
21 | AT3G06660 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
0.75 | 0.31 | -0.32 | |||
22 | AT2G21000 | transposable element gene | 0.75 | 0.31 | -0.32 | |||
23 | AT3G57990 | unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). |
0.74 | 0.32 | -0.31 | |||
24 | AT2G30620 | winged-helix DNA-binding transcription factor family protein |
0.74 | 0.32 | -0.32 | |||
25 | AT3G13674 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.3 | -0.34 | |||
26 | AT4G37470 | alpha/beta-Hydrolases superfamily protein | 0.74 | 0.29 | -0.32 | |||
27 | AT5G37890 | Protein with RING/U-box and TRAF-like domains | 0.74 | 0.31 | -0.31 | |||
28 | AT2G02130 | low-molecular-weight cysteine-rich 68 | low-molecular-weight cysteine-rich 68, PDF2.3 |
0.74 | 0.31 | -0.3 | ||
29 | AT5G66800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.73 | 0.32 | -0.32 | |||
30 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | -0.73 | 0.31 | -0.31 | ||
31 | AT2G22910 | N-acetyl-l-glutamate synthase 1 | N-acetyl-l-glutamate synthase 1 | -0.73 | 0.3 | -0.33 | ||
32 | AT3G43720 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.73 | 0.33 | -0.3 | |||
33 | AT5G59590 | UDP-glucosyl transferase 76E2 | UDP-glucosyl transferase 76E2 | -0.72 | 0.33 | -0.32 | ||
34 | AT5G15730 | Protein kinase superfamily protein | AtCRLK2, calcium/calmodulin-regulated receptor-like kinase 2 |
-0.72 | 0.31 | -0.32 | ||
35 | AT2G04570 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.72 | 0.34 | -0.32 | |||
36 | AT5G62430 | cycling DOF factor 1 | cycling DOF factor 1 | 0.72 | 0.32 | -0.32 | ||
37 | AT1G74390 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.72 | 0.3 | -0.33 | |||
38 | AT2G40475 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). |
ALTERED SEED GERMINATION 8 | 0.72 | 0.31 | -0.32 | ||
39 | AT4G27860 | vacuolar iron transporter (VIT) family protein | -0.71 | 0.31 | -0.32 | |||
40 | AT1G23560 | Domain of unknown function (DUF220) | -0.71 | 0.32 | -0.33 | |||
41 | AT5G50780 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
-0.71 | 0.31 | -0.31 | |||
42 | AT5G53500 | Transducin/WD40 repeat-like superfamily protein | 0.71 | 0.36 | -0.31 | |||
43 | AT4G19440 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.71 | 0.3 | -0.31 | |||
44 | AT5G67080 | mitogen-activated protein kinase kinase kinase 19 | mitogen-activated protein kinase kinase kinase 19 |
-0.71 | 0.33 | -0.34 | ||
45 | AT5G52050 | MATE efflux family protein | -0.71 | 0.31 | -0.34 | |||
46 | AT5G16230 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
0.71 | 0.32 | -0.3 | |||
47 | AT5G51500 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.71 | 0.32 | -0.34 | |||
48 | AT3G12170 | Chaperone DnaJ-domain superfamily protein | 0.71 | 0.33 | -0.3 | |||
49 | AT3G63150 | MIRO-related GTP-ase 2 | CALCIUM BINDING GTP-ASE, MIRO-related GTP-ase 2 |
-0.71 | 0.33 | -0.32 | ||
50 | AT1G24460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). |
TGN-localized SYP41 interacting protein |
-0.71 | 0.32 | -0.32 | ||
51 | AT1G23850 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.7 | 0.32 | -0.33 | |||
52 | AT3G47380 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.7 | 0.32 | -0.32 | |||
53 | AT5G01370 | ALC-interacting protein 1 | ALC-interacting protein 1 | 0.7 | 0.31 | -0.32 | ||
54 | AT5G61910 | DCD (Development and Cell Death) domain protein | -0.7 | 0.31 | -0.31 | |||
55 | AT1G29760 | Putative adipose-regulatory protein (Seipin) | -0.7 | 0.31 | -0.31 | |||
56 | AT2G24950 | Protein of Unknown Function (DUF239) | 0.7 | 0.31 | -0.34 | |||
57 | AT1G66370 | myb domain protein 113 | myb domain protein 113, myb domain protein 113 |
-0.7 | 0.3 | -0.33 | ||
58 | AT5G53360 | TRAF-like superfamily protein | -0.7 | 0.32 | -0.31 | |||
59 | AT5G24600 | Protein of unknown function, DUF599 | -0.7 | 0.3 | -0.34 | |||
60 | AT3G53620 | pyrophosphorylase 4 | pyrophosphorylase 4, pyrophosphorylase 4 |
0.69 | 0.32 | -0.31 | ||
61 | AT2G20300 | Protein kinase superfamily protein | Abnormal Leaf Shape 2 | 0.69 | 0.28 | -0.31 | ||
62 | AT1G56145 | Leucine-rich repeat transmembrane protein kinase | -0.69 | 0.31 | -0.31 | |||
63 | AT3G23810 | S-adenosyl-l-homocysteine (SAH) hydrolase 2 | S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2, S-adenosyl-l-homocysteine (SAH) hydrolase 2 |
0.69 | 0.31 | -0.31 | ||
64 | AT1G68450 | VQ motif-containing protein | PIGMENT DEFECTIVE 337 | -0.69 | 0.34 | -0.31 | ||
65 | AT2G17230 | EXORDIUM like 5 | EXORDIUM like 5 | 0.69 | 0.31 | -0.32 | ||
66 | AT1G59950 | NAD(P)-linked oxidoreductase superfamily protein | -0.69 | 0.33 | -0.3 | |||
67 | AT5G11150 | vesicle-associated membrane protein 713 | vesicle-associated membrane protein 713, VAMP713, vesicle-associated membrane protein 713 |
0.69 | 0.31 | -0.3 | ||
68 | AT2G17540 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.69 | 0.33 | -0.3 | |||
69 | AT1G10050 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
-0.69 | 0.31 | -0.33 | |||
70 | AT1G13100 | cytochrome P450, family 71, subfamily B, polypeptide 29 | cytochrome P450, family 71, subfamily B, polypeptide 29 |
0.69 | 0.32 | -0.31 | ||
71 | AT1G61810 | beta-glucosidase 45 | beta-glucosidase 45 | -0.68 | 0.3 | -0.32 | ||
72 | AT5G49945 | Protein of unknown function (DUF1682) | 0.68 | 0.31 | -0.33 | |||
73 | AT2G39110 | Protein kinase superfamily protein | -0.68 | 0.34 | -0.34 | |||
74 | AT1G17680 | tetratricopeptide repeat (TPR)-containing protein | -0.68 | 0.32 | -0.32 | |||
75 | AT3G22190 | IQ-domain 5 | IQ-domain 5 | 0.68 | 0.3 | -0.31 | ||
76 | AT2G01300 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.3 | -0.31 | |||
77 | AT1G61170 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). |
0.68 | 0.31 | -0.33 | |||
78 | AT1G43900 | Protein phosphatase 2C family protein | -0.67 | 0.32 | -0.3 | |||
79 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
-0.67 | 0.3 | -0.32 | ||
80 | AT2G23110 | Late embryogenesis abundant protein, group 6 | -0.67 | 0.3 | -0.32 | |||
81 | AT1G09940 | Glutamyl-tRNA reductase family protein | HEMA2 | -0.67 | 0.3 | -0.3 | ||
82 | AT2G45290 | Transketolase | -0.67 | 0.33 | -0.31 | |||
83 | AT5G22550 | Plant protein of unknown function (DUF247) | -0.66 | 0.31 | -0.34 | |||
84 | AT3G25260 | Major facilitator superfamily protein | -0.66 | 0.33 | -0.32 | |||
85 | AT1G26900 | Pentatricopeptide repeat (PPR) superfamily protein | -0.66 | 0.31 | -0.3 | |||
86 | AT5G44350 | ethylene-responsive nuclear protein -related | -0.66 | 0.3 | -0.35 | |||
87 | AT1G42460 | transposable element gene | -0.66 | 0.32 | -0.33 | |||
88 | AT4G36860 | LIM domain-containing protein | DA1-RELATED PROTEIN 1 | -0.66 | 0.33 | -0.33 | ||
89 | AT5G06839 | bZIP transcription factor family protein | bZIP65, TGACG (TGA) motif-binding protein 10 |
-0.66 | 0.31 | -0.32 | ||
90 | AT1G74490 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.33 | |||
91 | AT4G10880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.33 | -0.29 | |||
92 | AT1G24330 | ARM repeat superfamily protein | -0.65 | 0.34 | -0.32 | |||
93 | AT3G08970 | DNAJ heat shock N-terminal domain-containing protein | ATERDJ3A, THERMOSENSITIVE MALE STERILE 1 |
-0.65 | 0.3 | -0.32 | ||
94 | AT4G13780 | methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative |
-0.65 | 0.33 | -0.32 | |||
95 | AT2G43420 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein |
-0.65 | 0.33 | -0.32 | |||
96 | AT1G61820 | beta glucosidase 46 | beta glucosidase 46 | -0.64 | 0.31 | -0.32 | ||
97 | AT1G03280 | Transcription factor TFIIE, alpha subunit | -0.64 | 0.31 | -0.31 | |||
98 | AT2G16970 | Major facilitator superfamily protein | maternal effect embryo arrest 15 | -0.64 | 0.31 | -0.31 | ||
99 | AT1G28360 | ERF domain protein 12 | ERF DOMAIN PROTEIN 12, ERF domain protein 12 |
-0.64 | 0.33 | -0.32 | ||
100 | AT5G65600 | Concanavalin A-like lectin protein kinase family protein | -0.64 | 0.32 | -0.31 | |||
101 | AT1G05790 | lipase class 3 family protein | -0.64 | 0.3 | -0.32 | |||
102 | AT3G22170 | far-red elongated hypocotyls 3 | far-red elongated hypocotyls 3 | -0.64 | 0.3 | -0.31 | ||
103 | AT2G17845 | NAD(P)-binding Rossmann-fold superfamily protein | -0.64 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
104 | C0190 | O-acetyl-L-Serine | - | O-acetyl-L-Serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.89 | 0.44 | -0.45 | ||
105 | C0128 | Jasmonic acid | (+/-)-Jasmonic acid | (+)-Jasmonate; (-)-Jasmonate | jasmonic acid biosynthesis | -0.87 | 0.44 | -0.44 | ||
106 | C0120 | Isocitric acid | - | Isocitrate | TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
-0.79 | 0.44 | -0.45 | ||
107 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
-0.78 | 0.45 | -0.47 |