AT5G59890 : actin depolymerizing factor 4
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G59890
Description actin depolymerizing factor 4
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 1 0.31 -0.32
2 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.88 0.32 -0.33
3 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.86 0.3 -0.33
4 AT1G68300 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.86 0.31 -0.29
5 AT3G16190 Isochorismatase family protein 0.85 0.32 -0.31
6 AT4G15940 Fumarylacetoacetate (FAA) hydrolase family 0.85 0.3 -0.33
7 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 0.85 0.3 -0.32
8 AT1G48440 B-cell receptor-associated 31-like 0.85 0.34 -0.32
9 AT3G08990 Yippee family putative zinc-binding protein 0.84 0.31 -0.3
10 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6		 0.84 0.28 -0.31
11 AT4G20930 6-phosphogluconate dehydrogenase family protein 0.84 0.31 -0.32
12 AT1G71100 Ribose 5-phosphate isomerase, type A protein RADIAL SWELLING 10 0.84 0.31 -0.31
13 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.84 0.3 -0.32
14 AT1G17080 Ribosomal protein L18ae family 0.84 0.33 -0.31
15 AT4G29490 Metallopeptidase M24 family protein 0.84 0.31 -0.31
16 AT3G03890 FMN binding 0.83 0.33 -0.31
17 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3		 0.83 0.3 -0.3
18 AT2G01490 phytanoyl-CoA dioxygenase (PhyH) family protein 0.83 0.32 -0.31
19 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.83 0.32 -0.32
20 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.83 0.3 -0.3
21 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.83 0.32 -0.32
22 AT5G54940 Translation initiation factor SUI1 family protein 0.83 0.32 -0.31
23 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 0.83 0.31 -0.31
24 AT4G17830 Peptidase M20/M25/M40 family protein 0.83 0.31 -0.33
25 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.83 0.33 -0.33
26 AT4G29490 Metallopeptidase M24 family protein 0.83 0.31 -0.33
27 AT3G11660 NDR1/HIN1-like 1 NDR1/HIN1-like 1 0.83 0.33 -0.32
28 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.82 0.28 -0.33
29 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 0.82 0.3 -0.31
30 AT5G14590 Isocitrate/isopropylmalate dehydrogenase family protein 0.82 0.31 -0.34
31 AT3G11880 Protein of unknown function DUF2359, transmembrane 0.82 0.31 -0.32
32 AT1G01710 Acyl-CoA thioesterase family protein 0.82 0.32 -0.29
33 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.82 0.32 -0.31
34 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 0.82 0.28 -0.31
35 AT3G46670 UDP-glucosyl transferase 76E11 UDP-glucosyl transferase 76E11 0.82 0.31 -0.33
36 AT5G47760 2-phosphoglycolate phosphatase 2 2-phosphoglycolate phosphatase 2,
ATPK5, PGLP2, 2-phosphoglycolate
phosphatase 2		 0.82 0.33 -0.32
37 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.82 0.31 -0.31
38 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 0.82 0.33 -0.31
39 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.82 0.29 -0.31
40 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 0.82 0.31 -0.33
41 AT5G06260 TLD-domain containing nucleolar protein 0.82 0.34 -0.3
42 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 0.81 0.32 -0.34
43 AT1G12810 proline-rich family protein 0.81 0.31 -0.31
44 AT3G23490 cyanase cyanase 0.81 0.32 -0.32
45 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.81 0.31 -0.31
46 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.81 0.32 -0.32
47 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 0.81 0.3 -0.33
48 AT3G51730 saposin B domain-containing protein 0.81 0.31 -0.33
49 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.81 0.29 -0.35
50 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.81 0.32 -0.32
51 AT5G17650 glycine/proline-rich protein 0.81 0.32 -0.33
52 AT3G56620 nodulin MtN21 /EamA-like transporter family protein 0.81 0.31 -0.31
53 AT3G59280 Protein Transporter, Pam16 THAXTOMIN A RESISTANT 1 0.8 0.31 -0.31
54 AT5G59140 BTB/POZ domain-containing protein 0.8 0.34 -0.32
55 AT5G03660 Family of unknown function (DUF662) 0.8 0.3 -0.32
56 AT4G29160 SNF7 family protein SNF7.1 0.8 0.33 -0.3
57 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 0.8 0.34 -0.32
58 AT2G27820 prephenate dehydratase 1 arogenate dehydratase 3,
prephenate dehydratase 1		 0.8 0.31 -0.31
59 AT5G66310 ATP binding microtubule motor family protein -0.8 0.33 -0.31
60 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.31 -0.31
61 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 0.8 0.31 -0.3
62 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 0.8 0.31 -0.32
63 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.8 0.33 -0.33
64 AT2G39780 ribonuclease 2 ribonuclease 2 0.8 0.33 -0.31
65 AT1G04970 lipid-binding serum glycoprotein family protein 0.79 0.3 -0.31
66 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.79 0.33 -0.31
67 AT5G57815 Cytochrome c oxidase, subunit Vib family protein 0.79 0.31 -0.32
68 AT1G04960 Protein of unknown function (DUF1664) 0.79 0.33 -0.33
69 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.79 0.31 -0.31
70 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.79 0.31 -0.32
71 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein 0.79 0.34 -0.32
72 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.79 0.33 -0.3
73 AT3G45310 Cysteine proteinases superfamily protein 0.78 0.3 -0.32
74 AT5G63810 beta-galactosidase 10 beta-galactosidase 10 -0.78 0.31 -0.33
75 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein 0.78 0.3 -0.33
76 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.78 0.33 -0.31
77 AT3G03720 cationic amino acid transporter 4 cationic amino acid transporter 4 0.78 0.3 -0.32
78 AT5G11960 Protein of unknown function (DUF803) 0.78 0.31 -0.33
79 AT4G26310 elongation factor P (EF-P) family protein 0.78 0.31 -0.33
80 AT3G61200 Thioesterase superfamily protein 0.78 0.31 -0.33
81 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 0.78 0.33 -0.33
82 AT5G65860 ankyrin repeat family protein -0.77 0.34 -0.32
83 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.77 0.29 -0.32
84 AT2G40960 Single-stranded nucleic acid binding R3H protein -0.76 0.33 -0.33
85 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.76 0.31 -0.31
86 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 -0.75 0.3 -0.31
87 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 -0.75 0.32 -0.31
88 AT2G41820 Leucine-rich repeat protein kinase family protein -0.75 0.3 -0.31
89 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.75 0.33 -0.33
90 AT1G26540 Agenet domain-containing protein -0.74 0.31 -0.33
91 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.74 0.33 -0.31
92 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 -0.73 0.35 -0.31
93 AT4G38050 Xanthine/uracil permease family protein -0.73 0.33 -0.33
94 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.72 0.33 -0.33
95 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 -0.72 0.31 -0.33
96 AT5G10800 RNA recognition motif (RRM)-containing protein -0.72 0.3 -0.31
97 AT4G28100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.32 -0.32
98 AT5G14610 DEAD box RNA helicase family protein -0.72 0.31 -0.32
99 AT1G57820 Zinc finger (C3HC4-type RING finger) family protein ORTHRUS 2, VARIANT IN METHYLATION
1		 -0.71 0.34 -0.32
100 AT1G63480 AT hook motif DNA-binding family protein -0.71 0.32 -0.31
101 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' -0.7 0.33 -0.31
102 AT4G29720 polyamine oxidase 5 polyamine oxidase 5, polyamine
oxidase 5		 -0.7 0.3 -0.31
103 AT2G44440 Emsy N Terminus (ENT) domain-containing protein AtEML4, EMSY-like 4 -0.7 0.31 -0.33
104 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 -0.69 0.33 -0.32
105 AT5G65310 homeobox protein 5 ATHB-5, homeobox protein 5,
homeobox protein 5		 -0.69 0.31 -0.3
106 AT5G55250 IAA carboxylmethyltransferase 1 AtIAMT1, IAA
carboxylmethyltransferase 1		 -0.69 0.33 -0.31
107 AT2G16440 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 4 -0.68 0.32 -0.32
108 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.3 -0.32
109 AT1G28290 arabinogalactan protein 31 arabinogalactan protein 31 -0.68 0.32 -0.31
110 AT5G66850 mitogen-activated protein kinase kinase kinase 5 mitogen-activated protein kinase
kinase kinase 5		 -0.67 0.3 -0.31
111 AT3G18524 MUTS homolog 2 ATMSH2, MUTS homolog 2 -0.67 0.32 -0.31
112 AT2G29980 fatty acid desaturase 3 AtFAD3, fatty acid desaturase 3 -0.67 0.34 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.84 0.44 -0.43 C0120
114 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.79 0.44 -0.48 C0220