AT5G56750 : N-MYC downregulated-like 1
Query Information
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AGICode AT5G56750
Description N-MYC downregulated-like 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G56750 N-MYC downregulated-like 1 N-MYC downregulated-like 1 1 0.31 -0.34
2 AT5G64130 cAMP-regulated phosphoprotein 19-related protein 0.83 0.31 -0.33
3 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 0.82 0.33 -0.34
4 AT4G24160 alpha/beta-Hydrolases superfamily protein 0.82 0.33 -0.32
5 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.81 0.3 -0.32
6 AT4G18950 Integrin-linked protein kinase family 0.81 0.29 -0.32
7 AT3G10640 SNF7 family protein VPS60.1 0.81 0.3 -0.3
8 AT3G02070 Cysteine proteinases superfamily protein 0.81 0.32 -0.34
9 AT2G06530 SNF7 family protein VPS2.1 0.8 0.3 -0.32
10 AT1G74330 Protein kinase superfamily protein 0.8 0.33 -0.3
11 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 0.8 0.33 -0.31
12 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.79 0.32 -0.34
13 AT2G39510 nodulin MtN21 /EamA-like transporter family protein -0.79 0.32 -0.32
14 AT1G63180 UDP-D-glucose/UDP-D-galactose 4-epimerase 3 UDP-D-glucose/UDP-D-galactose
4-epimerase 3		 0.78 0.31 -0.29
15 AT1G29690 MAC/Perforin domain-containing protein constitutively activated cell
death 1		 0.78 0.33 -0.3
16 AT5G13190 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis
factor alpha factor (InterPro:IPR006629); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 AtGILP, GSH-induced LITAF domain
protein		 0.78 0.29 -0.33
17 AT1G31330 photosystem I subunit F photosystem I subunit F -0.78 0.32 -0.29
18 AT3G06760 Drought-responsive family protein 0.77 0.31 -0.32
19 AT4G22730 Leucine-rich repeat protein kinase family protein -0.77 0.33 -0.32
20 AT3G21070 NAD kinase 1 NAD KINASE 1, NAD kinase 1 0.77 0.31 -0.3
21 AT1G54500 Rubredoxin-like superfamily protein -0.77 0.31 -0.33
22 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 0.76 0.31 -0.31
23 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 0.76 0.32 -0.3
24 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.76 0.33 -0.32
25 AT3G61980 serine protease inhibitor, Kazal-type family protein 0.76 0.31 -0.31
26 AT1G75460 ATP-dependent protease La (LON) domain protein -0.76 0.29 -0.32
27 AT3G29170 Eukaryotic protein of unknown function (DUF872) 0.76 0.31 -0.32
28 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a 0.76 0.32 -0.33
29 AT3G51990 Protein kinase superfamily protein 0.76 0.31 -0.31
30 AT4G15800 ralf-like 33 ralf-like 33 0.76 0.32 -0.33
31 AT4G38420 SKU5 similar 9 SKU5 similar 9 0.75 0.34 -0.3
32 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 -0.75 0.31 -0.3
33 AT1G05805 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.75 0.32 -0.3
34 AT2G21120 Protein of unknown function (DUF803) 0.75 0.32 -0.31
35 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.75 0.32 -0.33
36 AT3G46930 Protein kinase superfamily protein 0.75 0.34 -0.31
37 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 0.74 0.31 -0.31
38 AT5G10560 Glycosyl hydrolase family protein -0.74 0.31 -0.31
39 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein 0.74 0.32 -0.32
40 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.32 -0.32
41 AT3G16500 phytochrome-associated protein 1 indole-3-acetic acid inducible 26,
phytochrome-associated protein 1		 0.74 0.32 -0.31
42 AT3G05290 peroxisomal adenine nucleotide carrier 1 AtPNC1, peroxisomal adenine
nucleotide carrier 1		 0.74 0.3 -0.3
43 AT2G29490 glutathione S-transferase TAU 1 glutathione S-transferase TAU 1,
GLUTATHIONE S-TRANSFERASE 19,
glutathione S-transferase TAU 1		 0.74 0.29 -0.3
44 AT1G24470 beta-ketoacyl reductase 2 ATKCR2, beta-ketoacyl reductase 2 -0.74 0.3 -0.31
45 AT4G14490 SMAD/FHA domain-containing protein -0.74 0.31 -0.29
46 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 0.74 0.31 -0.32
47 AT1G29340 plant U-box 17 ARABIDOPSIS THALIANA PLANT U-BOX
17, plant U-box 17		 0.74 0.32 -0.32
48 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 -0.73 0.32 -0.3
49 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein -0.73 0.3 -0.33
50 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 0.73 0.31 -0.35
51 AT3G15380 Plasma-membrane choline transporter family protein -0.73 0.31 -0.31
52 AT5G55470 Na+/H+ (sodium hydrogen) exchanger 3 ARABIDOPSIS THALIANA NA+/H+
(SODIUM HYDROGEN) EXCHANGER 3,
Na+/H+ (sodium hydrogen) exchanger
3		 -0.73 0.29 -0.33
53 AT2G14290 F-box family protein with a domain of unknown function
(DUF295)		 0.73 0.3 -0.32
54 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.32 -0.32
55 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 -0.73 0.3 -0.32
56 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 0.72 0.32 -0.31
57 AT1G28380 MAC/Perforin domain-containing protein necrotic spotted lesions 1 0.72 0.31 -0.3
58 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.72 0.33 -0.32
59 AT2G27500 Glycosyl hydrolase superfamily protein 0.72 0.33 -0.33
60 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.72 0.3 -0.31
61 AT5G46570 BR-signaling kinase 2 BR-signaling kinase 2 -0.72 0.32 -0.31
62 AT4G03240 frataxin homolog ATFH, frataxin homolog 0.72 0.31 -0.32
63 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.72 0.3 -0.32
64 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 0.72 0.32 -0.32
65 AT4G13790 SAUR-like auxin-responsive protein family 0.71 0.3 -0.3
66 AT4G17615 calcineurin B-like protein 1 ARABIDOPSIS THALIANA CALCINEURIN
B-LIKE PROTEIN, calcineurin B-like
protein 1, SOS3-LIKE CALCIUM
BINDING PROTEIN 5		 0.71 0.33 -0.32
67 AT5G02430 Transducin/WD40 repeat-like superfamily protein -0.71 0.32 -0.31
68 AT3G59350 Protein kinase superfamily protein 0.71 0.32 -0.29
69 AT2G41420 proline-rich family protein WINDHOSE 2 0.71 0.31 -0.31
70 AT3G05570 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits
to 73 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.33 -0.31
71 AT1G24350 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.71 0.31 -0.34
72 AT4G11900 S-locus lectin protein kinase family protein -0.71 0.33 -0.33
73 AT1G09070 soybean gene regulated by cold-2 SOYBEAN GENE REGULATED BY COLD-2,
soybean gene regulated by cold-2		 0.71 0.32 -0.34
74 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 -0.71 0.31 -0.33
75 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.7 0.34 -0.31
76 AT3G26950 unknown protein; Has 27 Blast hits to 27 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.31
77 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 -0.7 0.32 -0.29
78 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 -0.7 0.31 -0.31
79 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.31 -0.33
80 AT1G01070 nodulin MtN21 /EamA-like transporter family protein -0.69 0.33 -0.31
81 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.29 -0.32
82 AT3G57780 BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast
hits to 2460 proteins in 357 species: Archae - 16; Bacteria
- 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses -
72; Other Eukaryotes - 1360 (source: NCBI BLink).		 -0.68 0.33 -0.31
83 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 -0.68 0.31 -0.3
84 AT2G23200 Protein kinase superfamily protein -0.68 0.33 -0.31
85 AT5G12110 Glutathione S-transferase, C-terminal-like;Translation
elongation factor EF1B/ribosomal protein S6		 -0.67 0.3 -0.32
86 AT5G37040 F-box family protein -0.67 0.3 -0.32
87 AT1G07340 sugar transporter 2 sugar transporter 2, sugar
transporter 2		 -0.66 0.3 -0.31
88 AT5G10480 Protein-tyrosine phosphatase-like, PTPLA PASTICCINO 2, PEPINO -0.66 0.29 -0.31
89 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.66 0.33 -0.29
90 AT1G45230 Protein of unknown function (DUF3223) -0.66 0.32 -0.31
91 AT5G10760 Eukaryotic aspartyl protease family protein -0.66 0.3 -0.31
92 AT5G30440 transposable element gene -0.66 0.32 -0.33
93 AT1G09840 shaggy-like protein kinase 41 AtHIR1, shaggy-like protein kinase
41, hypersensitive induced
reaction 1, shaggy-like protein
kinase 41		 -0.65 0.31 -0.3
94 AT4G23130 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 cysteine-rich RLK (RECEPTOR-like
protein kinase) 5, RECEPTOR-LIKE
PROTEIN KINASE 6		 -0.65 0.32 -0.33
95 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast inner membrane, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; Has 200 Blast hits to 200
proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa
- 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes
- 35 (source: NCBI BLink).		 -0.65 0.33 -0.33
96 AT5G25470 AP2/B3-like transcriptional factor family protein -0.65 0.3 -0.31
97 AT3G26300 cytochrome P450, family 71, subfamily B, polypeptide 34 cytochrome P450, family 71,
subfamily B, polypeptide 34		 -0.65 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.82 0.41 -0.47 C0263
99 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III 		-0.67 0.47 -0.46 C0110