AT5G56900 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G56900
Description CwfJ-like family protein / zinc finger (CCCH-type) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G56900 CwfJ-like family protein / zinc finger (CCCH-type) family
protein		 1 0.29 -0.3
2 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 -0.62 0.32 -0.31
3 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 -0.61 0.32 -0.34
4 AT5G47250 LRR and NB-ARC domains-containing disease resistance
protein		 0.6 0.31 -0.31
5 AT1G13130 Cellulase (glycosyl hydrolase family 5) protein -0.6 0.32 -0.3
6 AT2G15240 UNC-50 family protein 0.59 0.3 -0.33
7 AT3G59120 Cysteine/Histidine-rich C1 domain family protein 0.58 0.3 -0.31
8 AT3G31380 transposable element gene 0.57 0.33 -0.31
9 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT 0.57 0.34 -0.31
10 AT4G15520 tRNA/rRNA methyltransferase (SpoU) family protein 0.57 0.32 -0.32
11 AT5G59130 Subtilase family protein -0.57 0.31 -0.31
12 AT5G42140 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.57 0.3 -0.33
13 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 0.56 0.3 -0.33
14 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 0.56 0.3 -0.33
15 AT5G59740 UDP-N-acetylglucosamine (UAA) transporter family 0.56 0.29 -0.31
16 AT3G17140 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.55 0.31 -0.31
17 AT1G78810 unknown protein; Has 75 Blast hits to 52 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2;
Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.55 0.32 -0.3
18 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.55 0.31 -0.3
19 AT3G32080 transposable element gene 0.55 0.33 -0.32
20 AT2G26490 Transducin/WD40 repeat-like superfamily protein -0.54 0.32 -0.33
21 AT3G03400 EF hand calcium-binding protein family -0.54 0.3 -0.31
22 AT5G67440 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 2, NAKED PINS
IN YUC MUTANTS 3		 0.54 0.32 -0.3
23 AT2G33000 ubiquitin-associated (UBA)/TS-N domain-containing
protein-related		 -0.54 0.31 -0.31
24 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.33 -0.32
25 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.54 0.33 -0.31
26 AT5G26640 BEST Arabidopsis thaliana protein match is:
anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2);
Has 293 Blast hits to 293 proteins in 137 species: Archae -
0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41;
Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).		 0.53 0.31 -0.32
27 AT5G43760 3-ketoacyl-CoA synthase 20 3-ketoacyl-CoA synthase 20 -0.53 0.32 -0.3
28 AT2G44420 protein N-terminal asparagine amidohydrolase family protein 0.53 0.3 -0.31
29 AT1G13980 sec7 domain-containing protein EMBRYO DEFECTIVE 30, GNOM,
VASCULAR NETWORK 7		 0.53 0.31 -0.3
30 AT1G53165 Protein kinase superfamily protein ATMAP4K ALPHA1 0.53 0.33 -0.32
31 AT2G23460 extra-large G-protein 1 ATXLG1, extra-large G-protein 1 0.52 0.32 -0.32
32 AT3G52510 F-box associated ubiquitination effector family protein 0.52 0.3 -0.33
33 AT1G54050 HSP20-like chaperones superfamily protein -0.52 0.31 -0.33
34 AT1G13110 cytochrome P450, family 71 subfamily B, polypeptide 7 cytochrome P450, family 71
subfamily B, polypeptide 7		 -0.52 0.33 -0.31
35 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.32 -0.35
36 AT1G66080 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF775 (InterPro:IPR008493); Has 285 Blast
hits to 283 proteins in 133 species: Archae - 0; Bacteria -
0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 -0.52 0.29 -0.32
37 AT4G05620 Galactose oxidase/kelch repeat superfamily protein 0.52 0.32 -0.33
38 AT3G54140 peptide transporter 1 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 1, peptide transporter
1		 -0.51 0.32 -0.33
39 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 0.51 0.31 -0.33
40 AT5G23340 RNI-like superfamily protein 0.51 0.33 -0.3
41 AT4G07480 transposable element gene -0.51 0.33 -0.31
42 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.51 0.33 -0.32
43 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.51 0.29 -0.34
44 AT5G35770 Transducin/WD40 repeat-like superfamily protein STERILE APETALA 0.51 0.3 -0.31
45 AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.3 -0.33
46 AT5G55020 myb domain protein 120 ATMYB120, myb domain protein 120 0.51 0.32 -0.31
47 AT3G29220 transposable element gene 0.51 0.29 -0.31
48 AT4G23720 Protein of unknown function (DUF1191) -0.5 0.3 -0.32
49 AT2G26720 Cupredoxin superfamily protein -0.5 0.32 -0.31
50 AT5G50470 nuclear factor Y, subunit C7 nuclear factor Y, subunit C7 -0.5 0.32 -0.32
51 AT5G05980 DHFS-FPGS homolog B DHFS-FPGS homolog B, DHFS-FPGS
homolog B, folylpolyglutamate
synthetase 1		 0.5 0.33 -0.31
52 AT5G46590 NAC domain containing protein 96 NAC domain containing protein 96,
NAC domain containing protein 96		 -0.5 0.31 -0.29
53 AT5G64870 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.5 0.33 -0.32
54 AT5G46510 Disease resistance protein (TIR-NBS-LRR class) family -0.49 0.32 -0.32
55 AT4G33410 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1,
SIGNAL PEPTIDE PEPTIDASE-LIKE 1		 0.49 0.31 -0.32
56 AT4G10070 KH domain-containing protein 0.49 0.32 -0.33
57 AT2G16280 3-ketoacyl-CoA synthase 9 3-ketoacyl-CoA synthase 9 -0.49 0.32 -0.32
58 AT4G25160 U-box domain-containing protein kinase family protein 0.49 0.32 -0.31
59 AT1G02940 glutathione S-transferase (class phi) 5 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, glutathione S-transferase
(class phi) 5		 -0.49 0.32 -0.31
60 AT1G64670 alpha/beta-Hydrolases superfamily protein BODYGUARD1, 9-CIS EPOXYCAROTENOID
DIOXYGENASE DEFECTIVE 1		 -0.49 0.31 -0.31
61 AT1G06770 DREB2A-interacting protein 1 DREB2A-interacting protein 1 -0.49 0.3 -0.32
62 AT1G10110 F-box family protein -0.49 0.3 -0.31
63 AT3G07960 Phosphatidylinositol-4-phosphate 5-kinase family protein phosphatidylinositol-4-phosphate
5-kinase 6		 0.49 0.32 -0.33
64 AT2G16870 Disease resistance protein (TIR-NBS-LRR class) family -0.48 0.33 -0.35
65 AT3G57210 Protein of unknown function (DUF626) -0.47 0.32 -0.3
66 AT3G32300 transposable element gene -0.47 0.32 -0.34
67 AT4G11660 winged-helix DNA-binding transcription factor family
protein		 AT-HSFB2B, HEAT SHOCK
TRANSCRIPTION FACTOR B2B		 -0.46 0.33 -0.31
68 AT2G27880 Argonaute family protein ARGONAUTE 5 -0.46 0.3 -0.32
69 AT3G21040 transposable element gene -0.45 0.32 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.71 0.43 -0.45 C0186
71 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.65 0.46 -0.46