AGICode | AT5G54690 |
Description | galacturonosyltransferase 12 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G54690 | galacturonosyltransferase 12 | galacturonosyltransferase 12, IRREGULAR XYLEM 8, LGT6 |
1 | 0.31 | -0.33 | ||
2 | AT5G01360 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 3 | 0.72 | 0.31 | -0.31 | ||
3 | AT5G44030 | cellulose synthase A4 | cellulose synthase A4, IRREGULAR XYLEM 5, NWS2 |
0.72 | 0.32 | -0.33 | ||
4 | AT2G37090 | Nucleotide-diphospho-sugar transferases superfamily protein | IRREGULAR XYLEM 9 | 0.7 | 0.35 | -0.3 | ||
5 | AT2G04740 | ankyrin repeat family protein | -0.7 | 0.33 | -0.31 | |||
6 | AT5G17420 | Cellulose synthase family protein | ATCESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRREGULAR XYLEM 3, MURUS 10 |
0.69 | 0.3 | -0.3 | ||
7 | AT4G24440 | transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) |
-0.67 | 0.29 | -0.3 | |||
8 | AT5G67060 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
HECATE 1 | -0.67 | 0.32 | -0.32 | ||
9 | AT4G18780 | cellulose synthase family protein | CELLULOSE SYNTHASE 8, CELLULOSE SYNTHASE 8, IRREGULAR XYLEM 1, LEAF WILTING 2 |
0.67 | 0.31 | -0.3 | ||
10 | AT4G21310 | Protein of unknown function (DUF1218) | -0.67 | 0.3 | -0.31 | |||
11 | AT2G32220 | Ribosomal L27e protein family | -0.66 | 0.32 | -0.31 | |||
12 | AT1G75030 | thaumatin-like protein 3 | thaumatin-like protein 3, thaumatin-like protein 3 |
0.66 | 0.29 | -0.35 | ||
13 | AT5G39760 | homeobox protein 23 | homeobox protein 23, homeobox protein 23, ZINC FINGER HOMEODOMAIN 10 |
-0.66 | 0.31 | -0.34 | ||
14 | AT1G72140 | Major facilitator superfamily protein | 0.66 | 0.31 | -0.31 | |||
15 | AT2G39980 | HXXXD-type acyl-transferase family protein | -0.65 | 0.32 | -0.32 | |||
16 | AT1G79620 | Leucine-rich repeat protein kinase family protein | 0.64 | 0.33 | -0.3 | |||
17 | AT3G52340 | sucrose-6F-phosphate phosphohydrolase 2 | SUCROSE-PHOSPHATASE 2, sucrose-6F-phosphate phosphohydrolase 2 |
-0.64 | 0.31 | -0.32 | ||
18 | AT2G03200 | Eukaryotic aspartyl protease family protein | 0.64 | 0.32 | -0.28 | |||
19 | AT2G25190 | PPPDE putative thiol peptidase family protein | -0.63 | 0.33 | -0.33 | |||
20 | AT5G53160 | regulatory components of ABA receptor 3 | PYR1-like 8, regulatory components of ABA receptor 3 |
-0.63 | 0.3 | -0.31 | ||
21 | AT1G14510 | alfin-like 7 | alfin-like 7 | -0.63 | 0.3 | -0.32 | ||
22 | AT1G15250 | Zinc-binding ribosomal protein family protein | -0.62 | 0.31 | -0.34 | |||
23 | AT4G29480 | Mitochondrial ATP synthase subunit G protein | -0.62 | 0.32 | -0.31 | |||
24 | AT2G25780 | Protein of unknown function (DUF1677) | -0.62 | 0.31 | -0.33 | |||
25 | AT5G58900 | Homeodomain-like transcriptional regulator | -0.62 | 0.32 | -0.32 | |||
26 | AT3G22320 | Eukaryotic rpb5 RNA polymerase subunit family protein | ATRPABC24.3, NRPB5, NRPD5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A |
-0.61 | 0.31 | -0.32 | ||
27 | AT3G50220 | Protein of unknown function (DUF579) | IRREGULAR XYLEM 15 | 0.61 | 0.33 | -0.33 | ||
28 | AT2G20690 | lumazine-binding family protein | -0.61 | 0.3 | -0.3 | |||
29 | AT5G50335 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.29 | -0.3 | |||
30 | AT3G09970 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.6 | 0.31 | -0.31 | |||
31 | AT1G62380 | ACC oxidase 2 | ACC oxidase 2, ATACO2 | -0.6 | 0.31 | -0.31 | ||
32 | AT1G06700 | Protein kinase superfamily protein | -0.6 | 0.33 | -0.31 | |||
33 | AT2G44310 | Calcium-binding EF-hand family protein | -0.6 | 0.32 | -0.32 | |||
34 | AT3G27350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast hits to 202 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
0.6 | 0.34 | -0.33 | |||
35 | AT1G24030 | Protein kinase superfamily protein | 0.6 | 0.3 | -0.32 | |||
36 | AT1G76940 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.59 | 0.32 | -0.31 | |||
37 | AT5G64830 | programmed cell death 2 C-terminal domain-containing protein |
-0.59 | 0.33 | -0.33 | |||
38 | AT2G42280 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.59 | 0.34 | -0.31 | |||
39 | AT3G25110 | fatA acyl-ACP thioesterase | fatA acyl-ACP thioesterase, fatA acyl-ACP thioesterase |
0.59 | 0.3 | -0.31 | ||
40 | AT1G55940 | cytochrome P450, family 708, subfamily A, polypeptide 1 | cytochrome P450, family 708, subfamily A, polypeptide 1 |
0.59 | 0.32 | -0.31 | ||
41 | AT3G09310 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). |
-0.59 | 0.33 | -0.32 | |||
42 | AT2G17360 | Ribosomal protein S4 (RPS4A) family protein | -0.59 | 0.3 | -0.3 | |||
43 | AT2G28760 | UDP-XYL synthase 6 | UDP-XYL synthase 6 | 0.58 | 0.3 | -0.35 | ||
44 | AT2G41230 | unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
ORGAN SIZE RELATED 1 | -0.58 | 0.32 | -0.31 | ||
45 | AT1G26450 | Carbohydrate-binding X8 domain superfamily protein | 0.58 | 0.34 | -0.32 | |||
46 | AT3G06310 | Cox19-like CHCH family protein | -0.58 | 0.35 | -0.32 | |||
47 | AT2G38080 | Laccase/Diphenol oxidase family protein | ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRREGULAR XYLEM 12, LACCASE 4, LACCASE-LIKE MULTICOPPER OXIDASE 4 |
0.58 | 0.32 | -0.32 | ||
48 | AT5G26880 | AGAMOUS-like 26 | AGAMOUS-like 26 | -0.58 | 0.32 | -0.33 | ||
49 | AT4G35350 | xylem cysteine peptidase 1 | xylem cysteine peptidase 1 | 0.58 | 0.3 | -0.3 | ||
50 | AT1G32100 | pinoresinol reductase 1 | ATPRR1, pinoresinol reductase 1 | 0.58 | 0.31 | -0.29 | ||
51 | AT2G43390 | unknown protein; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.32 | -0.31 | |||
52 | AT3G63270 | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.34 | -0.32 | |||
53 | AT5G47635 | Pollen Ole e 1 allergen and extensin family protein | 0.58 | 0.33 | -0.29 | |||
54 | AT3G53980 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.58 | 0.32 | -0.32 | |||
55 | AT1G08640 | Chloroplast J-like domain 1 | Chloroplast J-like domain 1 | -0.58 | 0.35 | -0.32 | ||
56 | AT5G19180 | E1 C-terminal related 1 | E1 C-terminal related 1 | -0.57 | 0.31 | -0.33 | ||
57 | AT3G11430 | glycerol-3-phosphate acyltransferase 5 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5, glycerol-3-phosphate acyltransferase 5 |
0.57 | 0.31 | -0.33 | ||
58 | AT4G18040 | eukaryotic translation initiation factor 4E | ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1, CUCUMOVIRUS MULTIPLICATION 1, eukaryotic translation initiation factor 4E, eukaryotic translation Initiation Factor 4E1 |
-0.57 | 0.32 | -0.32 | ||
59 | AT1G26470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.57 | 0.29 | -0.31 | |||
60 | AT1G33265 | Transmembrane proteins 14C | -0.57 | 0.31 | -0.3 | |||
61 | AT2G22360 | DNAJ heat shock family protein | -0.57 | 0.32 | -0.31 | |||
62 | AT5G28840 | GDP-D-mannose 3',5'-epimerase | GDP-D-mannose 3',5'-epimerase | -0.57 | 0.33 | -0.33 | ||
63 | AT2G40470 | LOB domain-containing protein 15 | ASYMMETRIC LEAVES2-LIKE 11, LOB domain-containing protein 15 |
0.57 | 0.31 | -0.3 | ||
64 | AT4G24940 | SUMO-activating enzyme 1A | AT-SAE1-1, SUMO-ACTIVATING ENZYME 1A, SUMO-activating enzyme 1A |
-0.57 | 0.3 | -0.34 | ||
65 | AT3G60200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
66 | AT5G51880 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.57 | 0.32 | -0.31 | |||
67 | AT5G06570 | alpha/beta-Hydrolases superfamily protein | -0.57 | 0.3 | -0.32 | |||
68 | AT4G15500 | UDP-Glycosyltransferase superfamily protein | UGT84A4 | 0.57 | 0.31 | -0.3 | ||
69 | AT1G72340 | NagB/RpiA/CoA transferase-like superfamily protein | -0.57 | 0.31 | -0.32 | |||
70 | AT3G12100 | Cation efflux family protein | -0.57 | 0.31 | -0.32 | |||
71 | AT5G53560 | cytochrome B5 isoform E | ATB5-A, ARABIDOPSIS CYTOCHROME B5 ISOFORM E, B5 #2, cytochrome B5 isoform E |
-0.57 | 0.32 | -0.32 | ||
72 | AT2G39500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.31 | |||
73 | AT1G77780 | Glycosyl hydrolase superfamily protein | -0.56 | 0.32 | -0.35 | |||
74 | AT1G08880 | Histone superfamily protein | GAMMA H2AX, gamma histone variant H2AX, H2AXA, histone H2A 5 |
-0.56 | 0.33 | -0.32 | ||
75 | AT3G10340 | phenylalanine ammonia-lyase 4 | phenylalanine ammonia-lyase 4 | 0.56 | 0.31 | -0.32 | ||
76 | AT3G28970 | Domain of unknown function (DUF298) | antiauxin-resistant 3 | -0.56 | 0.32 | -0.31 | ||
77 | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | -0.56 | 0.31 | -0.33 | |||
78 | AT3G63090 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.56 | 0.31 | -0.32 | |||
79 | AT4G38740 | rotamase CYP 1 | rotamase CYP 1 | 0.56 | 0.32 | -0.31 | ||
80 | AT1G07570 | Protein kinase superfamily protein | APK1, APK1A | -0.55 | 0.33 | -0.31 | ||
81 | AT2G40240 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.3 | -0.32 | |||
82 | AT5G60020 | laccase 17 | ATLAC17, laccase 17 | 0.55 | 0.32 | -0.32 | ||
83 | AT4G31080 | Protein of unknown function (DUF2296) | -0.55 | 0.32 | -0.31 | |||
84 | AT5G03730 | Protein kinase superfamily protein | AtCTR1, CONSTITUTIVE TRIPLE RESPONSE 1, SUGAR-INSENSITIVE 1 |
-0.55 | 0.32 | -0.32 | ||
85 | AT3G43290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 8 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.10 ten leaves visible; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.33 | -0.32 | |||
86 | AT5G09520 | hydroxyproline-rich glycoprotein family protein | Pro-Glu-Leu|Ile|Val-Pro-Lys 2 | 0.55 | 0.34 | -0.28 | ||
87 | AT3G19370 | Plant protein of unknown function (DUF869) | 0.55 | 0.33 | -0.3 | |||
88 | AT4G31210 | DNA topoisomerase, type IA, core | -0.55 | 0.32 | -0.33 | |||
89 | AT5G28300 | Duplicated homeodomain-like superfamily protein | -0.55 | 0.33 | -0.3 | |||
90 | AT1G19240 | unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.34 | |||
91 | AT3G13880 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.33 | -0.31 | |||
92 | AT4G26100 | casein kinase 1 | casein kinase 1, CKL1 | -0.54 | 0.34 | -0.31 | ||
93 | AT5G19870 | Family of unknown function (DUF716) | 0.54 | 0.3 | -0.33 | |||
94 | AT5G40020 | Pathogenesis-related thaumatin superfamily protein | 0.54 | 0.32 | -0.34 | |||
95 | AT1G06530 | Tropomyosin-related | peroxisomal and mitochondrial division factor 2 |
-0.54 | 0.32 | -0.33 | ||
96 | AT1G48170 | unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.3 | |||
97 | AT5G47530 | Auxin-responsive family protein | 0.54 | 0.31 | -0.31 | |||
98 | AT2G31810 | ACT domain-containing small subunit of acetolactate synthase protein |
-0.54 | 0.29 | -0.32 | |||
99 | AT1G70230 | TRICHOME BIREFRINGENCE-LIKE 27 | ALTERED XYLOGLUCAN 4, TRICHOME BIREFRINGENCE-LIKE 27 |
-0.54 | 0.33 | -0.32 | ||
100 | AT2G24430 | NAC domain containing protein 38 | NAC domain containing protein 38, Arabidopsis NAC domain containing protein 39, NAC domain containing protein 38 |
0.54 | 0.31 | -0.32 | ||
101 | AT1G64350 | Transducin/WD40 repeat-like superfamily protein | SEH1H | -0.54 | 0.32 | -0.31 | ||
102 | AT3G08000 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.54 | 0.33 | -0.31 | |||
103 | AT2G23890 | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase | -0.54 | 0.3 | -0.33 | |||
104 | AT5G50470 | nuclear factor Y, subunit C7 | nuclear factor Y, subunit C7 | -0.54 | 0.3 | -0.34 | ||
105 | AT5G07370 | inositol polyphosphate kinase 2 alpha | INOSITOL POLYPHOSPHATE KINASE 2 ALPHA, inositol polyphosphate kinase 2 alpha |
-0.54 | 0.31 | -0.31 | ||
106 | AT3G16920 | chitinase-like protein 2 | ATCTL2, chitinase-like protein 2 | 0.53 | 0.3 | -0.31 | ||
107 | AT5G39910 | Pectin lyase-like superfamily protein | 0.53 | 0.29 | -0.3 | |||
108 | AT1G71930 | vascular related NAC-domain protein 7 | Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 |
0.52 | 0.33 | -0.31 | ||
109 | AT5G01890 | Leucine-rich receptor-like protein kinase family protein | 0.51 | 0.3 | -0.31 | |||
110 | AT2G22510 | hydroxyproline-rich glycoprotein family protein | 0.51 | 0.31 | -0.31 | |||
111 | AT4G32880 | homeobox gene 8 | homeobox gene 8, ATHB8, homeobox gene 8 |
0.51 | 0.33 | -0.33 | ||
112 | AT2G04760 | transposable element gene | 0.51 | 0.3 | -0.33 | |||
113 | AT5G09220 | amino acid permease 2 | amino acid permease 2 | 0.5 | 0.31 | -0.3 | ||
114 | AT1G08500 | early nodulin-like protein 18 | AtENODL18, early nodulin-like protein 18 |
0.5 | 0.34 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
115 | C0103 | Glutaric acid | - | - | - | 0.73 | 0.5 | -0.45 | ||
116 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.51 | 0.31 | -0.31 |