AGICode | AT5G49630 |
Description | amino acid permease 6 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G49630 | amino acid permease 6 | amino acid permease 6 | 1 | 0.31 | -0.34 | ||
2 | AT4G38370 | Phosphoglycerate mutase family protein | 0.71 | 0.29 | -0.33 | |||
3 | AT5G10260 | RAB GTPase homolog H1E | RAB GTPase homolog H1E, RAB GTPase homolog H1E |
0.71 | 0.32 | -0.32 | ||
4 | AT1G62150 | Mitochondrial transcription termination factor family protein |
0.69 | 0.33 | -0.31 | |||
5 | AT5G35180 | Protein of unknown function (DUF1336) | -0.68 | 0.32 | -0.29 | |||
6 | AT5G56260 | Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase |
0.67 | 0.32 | -0.33 | |||
7 | AT1G65310 | xyloglucan endotransglucosylase/hydrolase 17 | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, xyloglucan endotransglucosylase/hydrolase 17 |
0.66 | 0.33 | -0.32 | ||
8 | AT3G55170 | Ribosomal L29 family protein | 0.66 | 0.32 | -0.32 | |||
9 | AT5G27990 | Pre-rRNA-processing protein TSR2, conserved region | 0.66 | 0.32 | -0.32 | |||
10 | AT1G21160 | eukaryotic translation initiation factor 2 (eIF-2) family protein |
-0.65 | 0.32 | -0.31 | |||
11 | AT1G48840 | Plant protein of unknown function (DUF639) | -0.65 | 0.31 | -0.3 | |||
12 | AT3G46270 | receptor protein kinase-related | 0.65 | 0.29 | -0.3 | |||
13 | AT4G17140 | pleckstrin homology (PH) domain-containing protein | -0.63 | 0.34 | -0.29 | |||
14 | AT1G64190 | 6-phosphogluconate dehydrogenase family protein | 0.63 | 0.29 | -0.33 | |||
15 | AT3G16530 | Legume lectin family protein | 0.63 | 0.31 | -0.32 | |||
16 | AT1G71030 | MYB-like 2 | ARABIDOPSIS MYB-LIKE 2, MYB-like 2 | -0.63 | 0.29 | -0.32 | ||
17 | AT1G79440 | aldehyde dehydrogenase 5F1 | aldehyde dehydrogenase 5F1, ENLARGED FIL EXPRESSION DOMAIN 1, SUCCINIC SEMIALDEHYDE DEHYDROGENASE, SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1 |
-0.62 | 0.29 | -0.31 | ||
18 | AT5G24316 | proline-rich family protein | -0.62 | 0.32 | -0.31 | |||
19 | AT4G34030 | 3-methylcrotonyl-CoA carboxylase | 3-methylcrotonyl-CoA carboxylase | -0.61 | 0.28 | -0.33 | ||
20 | AT2G37840 | Protein kinase superfamily protein | -0.61 | 0.32 | -0.32 | |||
21 | AT4G31020 | alpha/beta-Hydrolases superfamily protein | 0.61 | 0.31 | -0.32 | |||
22 | AT4G00550 | digalactosyl diacylglycerol deficient 2 | digalactosyl diacylglycerol deficient 2 |
-0.6 | 0.3 | -0.34 | ||
23 | AT2G41290 | strictosidine synthase-like 2 | strictosidine synthase-like 2 | 0.6 | 0.32 | -0.31 | ||
24 | AT4G01790 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.6 | 0.3 | -0.33 | |||
25 | AT5G20380 | phosphate transporter 4;5 | phosphate transporter 4;5 | -0.6 | 0.3 | -0.31 | ||
26 | AT4G35780 | ACT-like protein tyrosine kinase family protein | serine/threonine/tyrosine kinase 17 |
-0.59 | 0.3 | -0.3 | ||
27 | AT1G62830 | LSD1-like 1 | ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LSD1-like 1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 |
0.59 | 0.31 | -0.32 | ||
28 | AT4G32120 | Galactosyltransferase family protein | 0.59 | 0.29 | -0.3 | |||
29 | AT5G39590 | TLD-domain containing nucleolar protein | -0.59 | 0.31 | -0.31 | |||
30 | AT3G61600 | POZ/BTB containin G-protein 1 | POZ/BTB containin G-protein 1, POZ/BTB containin G-protein 1 |
-0.59 | 0.31 | -0.32 | ||
31 | AT3G18880 | Nucleic acid-binding, OB-fold-like protein | 0.59 | 0.29 | -0.31 | |||
32 | AT3G01310 | Phosphoglycerate mutase-like family protein | -0.59 | 0.31 | -0.3 | |||
33 | AT4G35230 | BR-signaling kinase 1 | BR-signaling kinase 1 | -0.59 | 0.33 | -0.31 | ||
34 | AT5G27320 | alpha/beta-Hydrolases superfamily protein | ATGID1C, GA INSENSITIVE DWARF1C | -0.59 | 0.31 | -0.33 | ||
35 | AT5G43310 | COP1-interacting protein-related | -0.59 | 0.33 | -0.3 | |||
36 | AT5G34790 | transposable element gene | 0.58 | 0.32 | -0.29 | |||
37 | AT1G21680 | DPP6 N-terminal domain-like protein | -0.58 | 0.3 | -0.31 | |||
38 | AT5G14270 | bromodomain and extraterminal domain protein 9 | bromodomain and extraterminal domain protein 9, bromodomain and extraterminal domain protein 9 |
-0.57 | 0.32 | -0.31 | ||
39 | AT1G55910 | zinc transporter 11 precursor | zinc transporter 11 precursor | 0.57 | 0.31 | -0.31 | ||
40 | AT1G49950 | telomere repeat binding factor 1 | TELOMERE REPEAT BINDING FACTOR 1, telomere repeat binding factor 1 |
0.57 | 0.3 | -0.31 | ||
41 | AT4G36110 | SAUR-like auxin-responsive protein family | 0.57 | 0.32 | -0.3 | |||
42 | AT3G03000 | EF hand calcium-binding protein family | 0.57 | 0.31 | -0.32 | |||
43 | AT4G16900 | Disease resistance protein (TIR-NBS-LRR class) family | -0.56 | 0.33 | -0.32 | |||
44 | AT4G08960 | phosphotyrosyl phosphatase activator (PTPA) family protein | -0.56 | 0.31 | -0.3 | |||
45 | AT3G42680 | transposable element gene | 0.56 | 0.31 | -0.32 | |||
46 | AT5G01560 | lectin receptor kinase a4.3 | lectin receptor kinase a4.3 | 0.56 | 0.32 | -0.32 | ||
47 | AT2G37840 | Protein kinase superfamily protein | -0.56 | 0.31 | -0.32 | |||
48 | AT1G68330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.55 | 0.31 | -0.31 | |||
49 | AT2G47310 | flowering time control protein-related / FCA gamma-related | -0.55 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
50 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.74 | 0.46 | -0.44 | ||
51 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
0.69 | 0.46 | -0.42 | ||
52 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.58 | 0.45 | -0.45 |