AGICode | AT5G44790 |
Description | copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G44790 | copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) |
HMA7, RESPONSIVE-TO-ANTAGONIST 1 | 1 | 0.31 | -0.33 | ||
2 | AT2G29180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 33 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.86 | 0.31 | -0.31 | |||
3 | AT5G15050 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.86 | 0.33 | -0.33 | |||
4 | AT1G67700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.86 | 0.32 | -0.31 | |||
5 | AT1G03475 | Coproporphyrinogen III oxidase | ATCPO-I, HEMF1, LESION INITIATION 2 |
-0.86 | 0.34 | -0.3 | ||
6 | AT2G35260 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.86 | 0.3 | -0.3 | |||
7 | AT1G03630 | protochlorophyllide oxidoreductase C | protochlorophyllide oxidoreductase C, PORC |
-0.86 | 0.3 | -0.31 | ||
8 | AT1G64770 | NDH-dependent cyclic electron flow 1 | NDH-dependent cyclic electron flow 1, NAD(P)H DEHYDROGENASE SUBUNIT 45, Photosynthetic NDH subcomplex B 2 |
-0.85 | 0.3 | -0.34 | ||
9 | AT3G15360 | thioredoxin M-type 4 | ATHM4, ARABIDOPSIS THIOREDOXIN M-TYPE 4, thioredoxin M-type 4 |
-0.85 | 0.31 | -0.34 | ||
10 | AT1G55480 | protein containing PDZ domain, a K-box domain, and a TPR region |
protein containing PDZ domain, a K-box domain, and a TPR region |
-0.85 | 0.33 | -0.31 | ||
11 | AT1G73655 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
-0.85 | 0.32 | -0.29 | |||
12 | AT1G03680 | thioredoxin M-type 1 | thioredoxin M-type 1, ARABIDOPSIS THIOREDOXIN M-TYPE 1, thioredoxin M-type 1, THIOREDOXIN M-TYPE 1 |
-0.85 | 0.31 | -0.31 | ||
13 | AT1G15730 | Cobalamin biosynthesis CobW-like protein | -0.84 | 0.31 | -0.32 | |||
14 | AT3G04790 | Ribose 5-phosphate isomerase, type A protein | EMBRYO DEFECTIVE 3119 | -0.84 | 0.33 | -0.33 | ||
15 | AT3G19480 | D-3-phosphoglycerate dehydrogenase | -0.84 | 0.31 | -0.31 | |||
16 | AT5G45930 | magnesium chelatase i2 | CHL I2, CHLI-2, magnesium chelatase i2 |
-0.84 | 0.3 | -0.32 | ||
17 | AT1G15820 | light harvesting complex photosystem II subunit 6 | CP24, light harvesting complex photosystem II subunit 6 |
-0.84 | 0.33 | -0.34 | ||
18 | AT5G20935 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.84 | 0.32 | -0.31 | |||
19 | AT4G15510 | Photosystem II reaction center PsbP family protein | -0.84 | 0.32 | -0.34 | |||
20 | AT1G67740 | photosystem II BY | photosystem II BY, YCF32 | -0.84 | 0.31 | -0.32 | ||
21 | AT1G55370 | NDH-dependent cyclic electron flow 5 | NDH-dependent cyclic electron flow 5 |
-0.83 | 0.31 | -0.3 | ||
22 | AT2G26580 | plant-specific transcription factor YABBY family protein | YABBY5 | -0.83 | 0.3 | -0.31 | ||
23 | AT2G40490 | Uroporphyrinogen decarboxylase | HEME2 | -0.83 | 0.31 | -0.32 | ||
24 | AT3G49470 | nascent polypeptide-associated complex subunit alpha-like protein 2 |
nascent polypeptide-associated complex subunit alpha-like protein 2 |
-0.83 | 0.31 | -0.33 | ||
25 | AT3G01660 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.83 | 0.33 | -0.32 | |||
26 | AT5G11420 | Protein of unknown function, DUF642 | -0.83 | 0.32 | -0.31 | |||
27 | AT1G07320 | ribosomal protein L4 | EMBRYO DEFECTIVE 2784, ribosomal protein L4 |
-0.83 | 0.32 | -0.3 | ||
28 | AT4G18370 | DEGP protease 5 | DEGP protease 5, DEGP PROTEASE 5, PROTEASE HHOA PRECUSOR |
-0.83 | 0.31 | -0.3 | ||
29 | AT4G00400 | glycerol-3-phosphate acyltransferase 8 | AtGPAT8, glycerol-3-phosphate acyltransferase 8 |
-0.83 | 0.32 | -0.32 | ||
30 | AT5G53490 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.83 | 0.32 | -0.33 | |||
31 | AT1G74470 | Pyridine nucleotide-disulphide oxidoreductase family protein |
-0.83 | 0.3 | -0.34 | |||
32 | AT3G24430 | ATP binding | HIGH-CHLOROPHYLL-FLUORESCENCE 101 | -0.83 | 0.32 | -0.34 | ||
33 | AT5G50760 | SAUR-like auxin-responsive protein family | 0.83 | 0.32 | -0.36 | |||
34 | AT5G55710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
translocon at the inner envelope membrane of chloroplasts 20-V, translocon at the inner envelope membrane of chloroplasts 20-V |
-0.82 | 0.32 | -0.31 | ||
35 | AT1G75690 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | LOW QUANTUM YIELD OF PHOTOSYSTEM II 1 |
-0.82 | 0.29 | -0.32 | ||
36 | AT4G39970 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.82 | 0.31 | -0.3 | |||
37 | AT5G42310 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.82 | 0.28 | -0.32 | |||
38 | AT5G11480 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.82 | 0.31 | -0.32 | |||
39 | AT1G14280 | phytochrome kinase substrate 2 | phytochrome kinase substrate 2 | -0.82 | 0.3 | -0.32 | ||
40 | AT1G18490 | Protein of unknown function (DUF1637) | -0.82 | 0.31 | -0.31 | |||
41 | AT4G09650 | ATP synthase delta-subunit gene | ATP synthase delta-subunit gene, PIGMENT DEFECTIVE 332 |
-0.82 | 0.31 | -0.32 | ||
42 | AT1G08470 | strictosidine synthase-like 3 | strictosidine synthase-like 3 | -0.82 | 0.31 | -0.32 | ||
43 | AT5G40710 | zinc finger (C2H2 type) family protein | -0.82 | 0.32 | -0.3 | |||
44 | AT3G51510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.82 | 0.32 | -0.34 | |||
45 | AT2G28930 | protein kinase 1B | protein kinase 1B, protein kinase 1B |
-0.82 | 0.31 | -0.31 | ||
46 | AT4G28660 | photosystem II reaction center PSB28 protein | photosystem II reaction center PSB28 protein |
-0.82 | 0.31 | -0.3 | ||
47 | AT5G16140 | Peptidyl-tRNA hydrolase family protein | -0.82 | 0.31 | -0.32 | |||
48 | AT4G02770 | photosystem I subunit D-1 | photosystem I subunit D-1 | -0.82 | 0.33 | -0.3 | ||
49 | AT2G13360 | alanine:glyoxylate aminotransferase | alanine:glyoxylate aminotransferase, ALANINE:GLYOXYLATE AMINOTRANSFERASE 1, L-serine:glyoxylate aminotransferase |
-0.82 | 0.3 | -0.33 | ||
50 | AT2G37660 | NAD(P)-binding Rossmann-fold superfamily protein | -0.82 | 0.31 | -0.3 | |||
51 | AT3G02730 | thioredoxin F-type 1 | ATF1, thioredoxin F-type 1 | -0.82 | 0.31 | -0.32 | ||
52 | AT5G38520 | alpha/beta-Hydrolases superfamily protein | -0.82 | 0.32 | -0.31 | |||
53 | AT2G23450 | Protein kinase superfamily protein | 0.81 | 0.3 | -0.34 | |||
54 | AT4G00180 | Plant-specific transcription factor YABBY family protein | YABBY3 | -0.81 | 0.31 | -0.31 | ||
55 | AT3G59060 | phytochrome interacting factor 3-like 6 | PHYTOCHROME-INTERACTING FACTOR 5, phytochrome interacting factor 3-like 6 |
-0.81 | 0.32 | -0.32 | ||
56 | AT4G17600 | Chlorophyll A-B binding family protein | LIL3:1 | -0.81 | 0.32 | -0.33 | ||
57 | AT1G26930 | Galactose oxidase/kelch repeat superfamily protein | 0.81 | 0.32 | -0.32 | |||
58 | AT3G55040 | glutathione transferase lambda 2 | glutathione transferase lambda 2 | -0.81 | 0.31 | -0.29 | ||
59 | AT3G54560 | histone H2A 11 | histone H2A 11 | -0.81 | 0.33 | -0.31 | ||
60 | AT5G07020 | proline-rich family protein | -0.81 | 0.3 | -0.3 | |||
61 | AT1G78630 | Ribosomal protein L13 family protein | embryo defective 1473 | -0.81 | 0.33 | -0.32 | ||
62 | AT1G04640 | lipoyltransferase 2 | lipoyltransferase 2 | -0.81 | 0.32 | -0.3 | ||
63 | AT5G41050 | Pollen Ole e 1 allergen and extensin family protein | -0.81 | 0.32 | -0.31 | |||
64 | AT1G80770 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
pigment defective 318 | -0.81 | 0.29 | -0.32 | ||
65 | AT1G48350 | Ribosomal L18p/L5e family protein | EMBRYO DEFECTIVE 3105 | -0.81 | 0.31 | -0.32 | ||
66 | AT1G14180 | RING/U-box superfamily protein | -0.81 | 0.33 | -0.32 | |||
67 | AT1G68590 | Ribosomal protein PSRP-3/Ycf65 | -0.81 | 0.33 | -0.33 | |||
68 | AT3G08920 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.81 | 0.31 | -0.32 | |||
69 | AT2G03420 | unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.81 | 0.32 | -0.28 | |||
70 | AT1G14270 | CAAX amino terminal protease family protein | -0.81 | 0.33 | -0.31 | |||
71 | AT4G18480 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHLORINA 42, CHLORINA 42, CHL11, CHLI-1, CHLI1 |
-0.81 | 0.33 | -0.3 | ||
72 | AT5G47630 | mitochondrial acyl carrier protein 3 | mitochondrial acyl carrier protein 3 |
-0.81 | 0.3 | -0.32 | ||
73 | AT1G29670 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.81 | 0.32 | -0.3 | |||
74 | AT4G24520 | P450 reductase 1 | ARABIDOPSIS CYTOCHROME REDUCTASE, P450 reductase 1 |
0.81 | 0.32 | -0.31 | ||
75 | AT4G13670 | plastid transcriptionally active 5 | plastid transcriptionally active 5 | -0.8 | 0.33 | -0.33 | ||
76 | AT5G27290 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.8 | 0.31 | -0.33 | |||
77 | AT4G15340 | pentacyclic triterpene synthase 1 | 04C11, pentacyclic triterpene synthase 1, pentacyclic triterpene synthase 1 |
0.8 | 0.28 | -0.31 | ||
78 | AT3G07670 | Rubisco methyltransferase family protein | -0.8 | 0.32 | -0.31 | |||
79 | AT1G06680 | photosystem II subunit P-1 | OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, OXYGEN-EVOLVING ENHANCER PROTEIN 2, photosystem II subunit P-1, PHOTOSYSTEM II SUBUNIT P |
-0.8 | 0.33 | -0.32 | ||
80 | AT5G14660 | peptide deformylase 1B | ATDEF2, DEF2, peptide deformylase 1B |
-0.8 | 0.31 | -0.3 | ||
81 | AT1G50280 | Phototropic-responsive NPH3 family protein | -0.8 | 0.3 | -0.31 | |||
82 | AT2G30200 | catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding |
EMBRYO DEFECTIVE 3147 | -0.8 | 0.33 | -0.33 | ||
83 | AT5G65220 | Ribosomal L29 family protein | -0.8 | 0.34 | -0.3 | |||
84 | AT1G32550 | 2Fe-2S ferredoxin-like superfamily protein | ferredoxin C 1 | -0.8 | 0.33 | -0.32 | ||
85 | AT2G30350 | Excinuclease ABC, C subunit, N-terminal | -0.8 | 0.32 | -0.3 | |||
86 | AT1G20020 | ferredoxin-NADP(+)-oxidoreductase 2 | LEAF FNR 2, ferredoxin-NADP(+)-oxidoreductase 2 |
-0.8 | 0.35 | -0.32 | ||
87 | AT3G54050 | high cyclic electron flow 1 | high cyclic electron flow 1 | -0.8 | 0.31 | -0.34 | ||
88 | AT5G20740 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.8 | 0.31 | -0.31 | |||
89 | AT1G32470 | Single hybrid motif superfamily protein | -0.8 | 0.3 | -0.31 | |||
90 | AT4G28780 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.8 | 0.34 | -0.31 | |||
91 | AT3G13120 | Ribosomal protein S10p/S20e family protein | -0.8 | 0.29 | -0.31 | |||
92 | AT5G66330 | Leucine-rich repeat (LRR) family protein | -0.8 | 0.31 | -0.33 | |||
93 | AT1G75450 | cytokinin oxidase 5 | ARABIDOPSIS THALIANA CYTOKININ OXIDASE 5, CYTOKININ OXIDASE 6, cytokinin oxidase 5 |
0.8 | 0.32 | -0.33 | ||
94 | AT1G64355 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). |
-0.8 | 0.31 | -0.33 | |||
95 | AT3G04290 | Li-tolerant lipase 1 | ATLTL1, Li-tolerant lipase 1 | -0.8 | 0.3 | -0.32 | ||
96 | AT4G05180 | photosystem II subunit Q-2 | PHOTOSYSTEM II SUBUNIT Q, photosystem II subunit Q-2, PSII-Q |
-0.8 | 0.34 | -0.32 | ||
97 | AT4G01050 | thylakoid rhodanese-like | thylakoid rhodanese-like | -0.8 | 0.32 | -0.31 | ||
98 | AT4G04640 | ATPase, F1 complex, gamma subunit protein | ATPC1 | -0.8 | 0.32 | -0.31 | ||
99 | AT5G46340 | O-acetyltransferase family protein | REDUCED WALL ACETYLATION 1 | 0.8 | 0.29 | -0.33 | ||
100 | AT4G30620 | Uncharacterised BCR, YbaB family COG0718 | -0.8 | 0.33 | -0.3 | |||
101 | AT2G42220 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.8 | 0.3 | -0.32 | |||
102 | AT1G20340 | Cupredoxin superfamily protein | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112, PLASTOCYANIN 2 |
-0.8 | 0.32 | -0.34 | ||
103 | AT4G27700 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.8 | 0.31 | -0.29 | |||
104 | AT4G39620 | Tetratricopeptide repeat (TPR)-like superfamily protein | A. THALIANA PENTATRICOPEPTIDE REPEAT 5, EMBRYO DEFECTIVE 2453 |
-0.8 | 0.3 | -0.34 | ||
105 | AT5G54270 | light-harvesting chlorophyll B-binding protein 3 | light-harvesting chlorophyll B-binding protein 3, LHCB3*1 |
-0.8 | 0.32 | -0.31 | ||
106 | AT4G23740 | Leucine-rich repeat protein kinase family protein | -0.8 | 0.32 | -0.3 | |||
107 | AT4G18360 | Aldolase-type TIM barrel family protein | 0.8 | 0.34 | -0.3 | |||
108 | AT3G48730 | glutamate-1-semialdehyde 2,1-aminomutase 2 | glutamate-1-semialdehyde 2,1-aminomutase 2 |
-0.8 | 0.31 | -0.31 | ||
109 | AT1G66430 | pfkB-like carbohydrate kinase family protein | -0.8 | 0.3 | -0.33 | |||
110 | AT2G29065 | GRAS family transcription factor | 0.8 | 0.3 | -0.32 | |||
111 | AT4G21280 | photosystem II subunit QA | PHOTOSYSTEM II SUBUNIT Q, PHOTOSYSTEM II SUBUNIT Q-1, photosystem II subunit QA |
-0.8 | 0.31 | -0.32 | ||
112 | AT3G47730 | ATP-binding cassette A2 | ATP-binding cassette A2, A. THALIANA ABC2 HOMOLOG 1, ABC2 homolog 1 |
0.79 | 0.29 | -0.32 | ||
113 | AT5G52960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.79 | 0.33 | -0.32 | |||
114 | AT4G39270 | Leucine-rich repeat protein kinase family protein | 0.79 | 0.31 | -0.29 | |||
115 | AT3G26650 | glyceraldehyde 3-phosphate dehydrogenase A subunit | glyceraldehyde 3-phosphate dehydrogenase A subunit, GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 1 |
-0.79 | 0.31 | -0.3 | ||
116 | AT3G54210 | Ribosomal protein L17 family protein | -0.79 | 0.33 | -0.3 | |||
117 | AT1G08380 | photosystem I subunit O | photosystem I subunit O | -0.79 | 0.32 | -0.3 | ||
118 | AT2G30390 | ferrochelatase 2 | ATFC-II, FC-II, ferrochelatase 2 | -0.79 | 0.31 | -0.32 | ||
119 | AT2G03780 | Translin family protein | -0.79 | 0.32 | -0.31 | |||
120 | AT3G50820 | photosystem II subunit O-2 | OXYGEN EVOLVING COMPLEX SUBUNIT 33 KDA, PHOTOSYSTEM II SUBUNIT O-2, photosystem II subunit O-2 |
-0.79 | 0.33 | -0.32 | ||
121 | AT1G77090 | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein |
-0.79 | 0.33 | -0.32 | |||
122 | AT1G11300 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding |
-0.79 | 0.33 | -0.31 | |||
123 | AT3G28460 | methyltransferases | -0.79 | 0.32 | -0.31 | |||
124 | AT5G66530 | Galactose mutarotase-like superfamily protein | -0.79 | 0.31 | -0.32 | |||
125 | AT3G27750 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3123 | -0.79 | 0.3 | -0.31 | ||
126 | AT5G01530 | light harvesting complex photosystem II | light harvesting complex photosystem II |
-0.79 | 0.32 | -0.33 | ||
127 | AT1G35680 | Ribosomal protein L21 | chloroplast ribosomal protein L21 | -0.79 | 0.33 | -0.32 | ||
128 | AT1G64150 | Uncharacterized protein family (UPF0016) | -0.79 | 0.32 | -0.32 | |||
129 | AT5G66170 | sulfurtransferase 18 | sulfurtransferase 18 | 0.79 | 0.31 | -0.32 | ||
130 | AT5G22340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.79 | 0.32 | -0.32 | |||
131 | AT5G66190 | ferredoxin-NADP(+)-oxidoreductase 1 | LEAF FNR 1, ferredoxin-NADP(+)-oxidoreductase 1 |
-0.79 | 0.3 | -0.33 | ||
132 | AT1G80760 | NOD26-like intrinsic protein 6;1 | NIP6, NOD26-like intrinsic protein 6;1, NLM7 |
-0.79 | 0.33 | -0.31 | ||
133 | AT5G14320 | Ribosomal protein S13/S18 family | EMBRYO DEFECTIVE 3137 | -0.79 | 0.32 | -0.31 | ||
134 | AT4G37510 | Ribonuclease III family protein | -0.79 | 0.32 | -0.31 | |||
135 | AT5G66470 | RNA binding;GTP binding | -0.79 | 0.33 | -0.29 | |||
136 | AT5G55990 | calcineurin B-like protein 2 | ATCBL2, calcineurin B-like protein 2 |
-0.79 | 0.33 | -0.31 | ||
137 | AT4G10050 | esterase/lipase/thioesterase family protein | 0.79 | 0.33 | -0.31 | |||
138 | AT2G23670 | homolog of Synechocystis YCF37 | homolog of Synechocystis YCF37 | -0.79 | 0.31 | -0.3 | ||
139 | AT3G53900 | uracil phosphoribosyltransferase | PYRIMIDINE R, uracil phosphoribosyltransferase |
-0.79 | 0.32 | -0.32 | ||
140 | AT1G50900 | Ankyrin repeat family protein | Grana Deficient Chloroplast 1, LHCP translocation defect |
-0.79 | 0.33 | -0.32 | ||
141 | AT5G55230 | microtubule-associated proteins 65-1 | microtubule-associated proteins 65-1, MAP65-1, microtubule-associated proteins 65-1 |
-0.79 | 0.31 | -0.32 | ||
142 | AT2G41220 | glutamate synthase 2 | glutamate synthase 2 | 0.79 | 0.31 | -0.32 | ||
143 | AT3G15480 | Protein of unknown function (DUF1218) | -0.79 | 0.32 | -0.31 | |||
144 | AT4G05090 | Inositol monophosphatase family protein | -0.79 | 0.31 | -0.3 | |||
145 | AT1G64060 | respiratory burst oxidase protein F | respiratory burst oxidase protein F, ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE HOMOLOG F, respiratory burst oxidase protein F, RBOHAP108, RESPIRATORY BURST OXIDASE PROTEIN F |
0.79 | 0.32 | -0.32 | ||
146 | AT1G78995 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.79 | 0.32 | -0.31 | |||
147 | AT5G57030 | Lycopene beta/epsilon cyclase protein | LUTEIN DEFICIENT 2 | -0.79 | 0.31 | -0.33 | ||
148 | AT2G34500 | cytochrome P450, family 710, subfamily A, polypeptide 1 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
0.79 | 0.31 | -0.32 | ||
149 | AT3G52840 | beta-galactosidase 2 | beta-galactosidase 2 | -0.79 | 0.31 | -0.29 | ||
150 | AT5G19620 | outer envelope protein of 80 kDa | ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA, EMBRYO DEFECTIVE 213, outer envelope protein of 80 kDa, translocon at the outer envelope membrane of chloroplasts 75-V |
-0.79 | 0.3 | -0.33 | ||
151 | AT5G10820 | Major facilitator superfamily protein | 0.78 | 0.31 | -0.29 | |||
152 | AT5G16910 | cellulose-synthase like D2 | ATCSLD2, cellulose-synthase like D2 |
0.78 | 0.32 | -0.31 | ||
153 | AT2G14120 | dynamin related protein | dynamin related protein | 0.78 | 0.32 | -0.32 | ||
154 | AT1G20490 | AMP-dependent synthetase and ligase family protein | 0.77 | 0.31 | -0.32 | |||
155 | AT1G18260 | HCP-like superfamily protein | EMS-mutagenized bri1 suppressor 5, HRD3A |
0.77 | 0.33 | -0.32 | ||
156 | AT5G47050 | SBP (S-ribonuclease binding protein) family protein | 0.77 | 0.31 | -0.32 | |||
157 | AT5G42870 | phosphatidic acid phosphohydrolase 2 | PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2, phosphatidic acid phosphohydrolase 2 |
0.77 | 0.34 | -0.32 | ||
158 | AT3G05360 | receptor like protein 30 | receptor like protein 30, receptor like protein 30 |
0.77 | 0.33 | -0.32 | ||
159 | AT3G16340 | pleiotropic drug resistance 1 | ATP-binding cassette G29, PLEIOTROPIC DRUG RESISTANCE 1, pleiotropic drug resistance 1 |
0.76 | 0.32 | -0.3 | ||
160 | AT5G24290 | Vacuolar iron transporter (VIT) family protein | 0.76 | 0.34 | -0.32 | |||
161 | AT5G43100 | Eukaryotic aspartyl protease family protein | 0.76 | 0.3 | -0.32 | |||
162 | AT4G32070 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
Phox4 | 0.76 | 0.3 | -0.29 | ||
163 | AT5G09980 | elicitor peptide 4 precursor | elicitor peptide 4 precursor | 0.76 | 0.32 | -0.31 | ||
164 | AT1G30400 | multidrug resistance-associated protein 1 | ATP-binding cassette C1, Arabidopsis thaliana ATP-binding cassette C1, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1, EST1, multidrug resistance-associated protein 1 |
0.76 | 0.32 | -0.32 | ||
165 | AT3G25290 | Auxin-responsive family protein | 0.76 | 0.31 | -0.3 | |||
166 | AT5G13010 | RNA helicase family protein | embryo defective 3011 | 0.75 | 0.29 | -0.31 | ||
167 | AT3G51440 | Calcium-dependent phosphotriesterase superfamily protein | 0.75 | 0.32 | -0.33 | |||
168 | AT5G63840 | Glycosyl hydrolases family 31 protein | PRIORITY IN SWEET LIFE 5, RADIAL SWELLING 3 |
0.75 | 0.34 | -0.32 | ||
169 | AT3G49490 | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). |
0.75 | 0.29 | -0.3 | |||
170 | AT5G63930 | Leucine-rich repeat protein kinase family protein | 0.75 | 0.34 | -0.34 | |||
171 | AT1G79710 | Major facilitator superfamily protein | 0.75 | 0.29 | -0.31 | |||
172 | AT5G15730 | Protein kinase superfamily protein | AtCRLK2, calcium/calmodulin-regulated receptor-like kinase 2 |
0.75 | 0.33 | -0.32 | ||
173 | AT1G23040 | hydroxyproline-rich glycoprotein family protein | 0.75 | 0.32 | -0.31 | |||
174 | AT5G12290 | dgd1 suppressor 1 | DGD1 SUPPRESSOR 1 | 0.74 | 0.33 | -0.32 | ||
175 | AT1G63440 | heavy metal atpase 5 | heavy metal atpase 5 | 0.74 | 0.3 | -0.32 | ||
176 | AT5G58730 | pfkB-like carbohydrate kinase family protein | 0.74 | 0.3 | -0.31 | |||
177 | AT1G05000 | Phosphotyrosine protein phosphatases superfamily protein | AtPFA-DSP1, plant and fungi atypical dual-specificity phosphatase 1 |
0.74 | 0.3 | -0.32 | ||
178 | AT4G27860 | vacuolar iron transporter (VIT) family protein | 0.73 | 0.32 | -0.3 | |||
179 | AT2G03850 | Late embryogenesis abundant protein (LEA) family protein | 0.73 | 0.31 | -0.33 | |||
180 | AT5G02170 | Transmembrane amino acid transporter family protein | 0.73 | 0.3 | -0.31 | |||
181 | AT1G30270 | CBL-interacting protein kinase 23 | ATCIPK23, CBL-interacting protein kinase 23, LOW-K+-SENSITIVE 1, SOS2-like protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.23 |
0.73 | 0.3 | -0.32 | ||
182 | AT3G16460 | Mannose-binding lectin superfamily protein | jacalin-related lectin 34 | 0.73 | 0.31 | -0.35 | ||
183 | AT5G51500 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.73 | 0.34 | -0.32 | |||
184 | AT4G15610 | Uncharacterised protein family (UPF0497) | 0.73 | 0.33 | -0.32 | |||
185 | AT1G23850 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.34 | -0.31 | |||
186 | AT5G60300 | Concanavalin A-like lectin protein kinase family protein | lectin receptor kinase I.9 | 0.72 | 0.31 | -0.3 | ||
187 | AT5G28510 | beta glucosidase 24 | beta glucosidase 24 | 0.72 | 0.3 | -0.32 | ||
188 | AT4G15330 | cytochrome P450, family 705, subfamily A, polypeptide 1 | cytochrome P450, family 705, subfamily A, polypeptide 1 |
0.72 | 0.31 | -0.32 | ||
189 | AT3G49210 | O-acyltransferase (WSD1-like) family protein | 0.72 | 0.3 | -0.32 | |||
190 | AT2G28110 | Exostosin family protein | FRAGILE FIBER 8, IRREGULAR XYLEM 7 | 0.72 | 0.34 | -0.33 | ||
191 | AT2G39350 | ABC-2 type transporter family protein | ATP-binding cassette G1 | 0.72 | 0.31 | -0.31 | ||
192 | AT5G50780 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
0.71 | 0.32 | -0.32 | |||
193 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | 0.71 | 0.32 | -0.31 | ||
194 | AT1G51420 | sucrose-phosphatase 1 | SUCROSE-PHOSPHATASE 1, sucrose-phosphatase 1 |
0.71 | 0.34 | -0.29 | ||
195 | AT1G26730 | EXS (ERD1/XPR1/SYG1) family protein | 0.71 | 0.33 | -0.31 | |||
196 | AT1G35260 | MLP-like protein 165 | MLP-like protein 165 | 0.71 | 0.3 | -0.32 | ||
197 | AT2G41850 | polygalacturonase abscission zone A. thaliana | ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, polygalacturonase abscission zone A. thaliana |
0.71 | 0.31 | -0.3 | ||
198 | AT1G69450 | Early-responsive to dehydration stress protein (ERD4) | 0.71 | 0.31 | -0.31 | |||
199 | AT1G65660 | Pre-mRNA splicing Prp18-interacting factor | SWELLMAP 1 | 0.71 | 0.31 | -0.31 | ||
200 | AT1G09960 | sucrose transporter 4 | SUCROSE TRANSPORTER 4, SUCROSE TRANSPORTER 4, SUCROSE TRANSPORTER 4, sucrose transporter 4 |
0.71 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
201 | C0204 | Phosphatidylglycerol-34:2 | - | Phosphatidylglycerol-34:2 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.83 | 0.48 | -0.44 | ||
202 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
0.8 | 0.44 | -0.47 |