AT5G41350 : -
Query Information
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AGICode AT5G41350
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G41350 RING/U-box superfamily protein 1 0.31 -0.3
2 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.87 0.32 -0.3
3 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.85 0.33 -0.34
4 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.85 0.3 -0.33
5 AT5G04830 Nuclear transport factor 2 (NTF2) family protein 0.85 0.31 -0.31
6 AT3G03890 FMN binding 0.84 0.32 -0.34
7 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.83 0.31 -0.33
8 AT2G26230 uricase / urate oxidase / nodulin 35, putative 0.82 0.33 -0.3
9 AT5G03660 Family of unknown function (DUF662) 0.82 0.32 -0.3
10 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 0.82 0.33 -0.32
11 AT4G29160 SNF7 family protein SNF7.1 0.81 0.3 -0.32
12 AT4G10140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF2062 (InterPro:IPR018639); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.81 0.31 -0.31
13 AT5G50100 Putative thiol-disulphide oxidoreductase DCC 0.81 0.31 -0.31
14 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 0.81 0.33 -0.32
15 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 0.8 0.3 -0.33
16 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 0.8 0.3 -0.31
17 AT5G49890 chloride channel C ATCLC-C, chloride channel C 0.8 0.33 -0.3
18 AT3G22260 Cysteine proteinases superfamily protein 0.8 0.33 -0.32
19 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.3 -0.33
20 AT1G54150 E3 Ubiquitin ligase family protein 0.79 0.3 -0.34
21 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 0.79 0.31 -0.32
22 AT3G03740 BTB-POZ and MATH domain 4 BTB-POZ AND MATH DOMAIN 4, BTB-POZ
and MATH domain 4		 0.79 0.35 -0.31
23 AT5G58150 Leucine-rich repeat protein kinase family protein -0.79 0.32 -0.32
24 AT5G65860 ankyrin repeat family protein -0.79 0.33 -0.3
25 AT3G12490 cystatin B ARABIDOPSIS THALIANA PHYTOCYSTATIN
6, cystatin B, cystatin B		 0.79 0.32 -0.33
26 AT4G29490 Metallopeptidase M24 family protein 0.79 0.31 -0.29
27 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases 0.78 0.32 -0.31
28 AT3G46460 ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme 13 0.78 0.32 -0.32
29 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.78 0.32 -0.32
30 AT3G06100 NOD26-like intrinsic protein 7;1 NOD26-like intrinsic protein 7;1,
NOD26-LIKE MIP 6, NOD26-LIKE MIP 8		 0.78 0.32 -0.33
31 AT3G55140 Pectin lyase-like superfamily protein 0.78 0.31 -0.33
32 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.77 0.31 -0.34
33 AT5G40370 Glutaredoxin family protein glutaredoxin C2 0.77 0.33 -0.31
34 AT2G02810 UDP-galactose transporter 1 UDP-GALACTOSE TRANSPORTER 1,
UDP-galactose transporter 1		 0.77 0.32 -0.35
35 AT4G10970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.77 0.32 -0.29
36 AT4G03410 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.77 0.31 -0.28
37 AT5G19070 SNARE associated Golgi protein family 0.77 0.29 -0.32
38 AT1G64810 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 1 0.77 0.3 -0.31
39 AT5G53330 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.76 0.31 -0.29
40 AT3G57090 Tetratricopeptide repeat (TPR)-like superfamily protein BIGYIN, FISSION 1A 0.76 0.31 -0.33
41 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 0.76 0.31 -0.33
42 AT4G24990 Ubiquitin family protein ATGP4 0.76 0.31 -0.32
43 AT5G53970 Tyrosine transaminase family protein tyrosine aminotransferase 7 0.76 0.32 -0.3
44 AT2G31350 glyoxalase 2-5 glyoxalase 2-5 0.76 0.31 -0.29
45 AT5G22950 SNF7 family protein VPS24.1 0.76 0.3 -0.31
46 AT4G10100 co-factor for nitrate, reductase and xanthine dehydrogenase
7		 co-factor for nitrate, reductase
and xanthine dehydrogenase 7, SIR5		 0.75 0.34 -0.3
47 AT5G27280 Zim17-type zinc finger protein 0.75 0.32 -0.32
48 AT4G32930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF866, eukaryotic (InterPro:IPR008584);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.75 0.31 -0.31
49 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 0.74 0.32 -0.31
50 AT1G28120 CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain
(InterPro:IPR003323), Ubiquitin thioesterase Otubain
(InterPro:IPR016615), Peptidase C65, otubain
(InterPro:IPR019400); Has 413 Blast hits to 411 proteins in
139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi
- 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.74 0.31 -0.33
51 AT4G10330 glycine-rich protein 0.74 0.32 -0.31
52 AT4G04800 methionine sulfoxide reductase B3 methionine sulfoxide reductase B3,
methionine sulfoxide reductase B3		 0.74 0.32 -0.33
53 AT1G66900 alpha/beta-Hydrolases superfamily protein 0.74 0.31 -0.31
54 AT5G23660 homolog of Medicago truncatula MTN3 AtSWEET12, homolog of Medicago
truncatula MTN3, SWEET12		 0.74 0.3 -0.34
55 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 0.74 0.33 -0.33
56 AT1G64360 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.32 -0.33
57 AT5G19970 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.74 0.33 -0.31
58 AT4G13010 Oxidoreductase, zinc-binding dehydrogenase family protein 0.74 0.34 -0.3
59 AT5G14710 CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3
(InterPro:IPR018788); Has 120 Blast hits to 120 proteins in
47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi -
2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.74 0.33 -0.31
60 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II 0.74 0.32 -0.31
61 AT1G64850 Calcium-binding EF hand family protein 0.74 0.3 -0.31
62 AT4G11130 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2,
SILENCING MOVEMENT DEFICIENT 1		 -0.73 0.3 -0.28
63 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.72 0.3 -0.31
64 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.72 0.31 -0.31
65 AT2G28250 Protein kinase superfamily protein NCRK -0.71 0.32 -0.32
66 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.71 0.3 -0.31
67 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.71 0.29 -0.31
68 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.71 0.3 -0.32
69 AT2G19200 unknown protein -0.7 0.31 -0.31
70 AT2G01630 O-Glycosyl hydrolases family 17 protein -0.7 0.34 -0.32
71 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.7 0.32 -0.31
72 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.7 0.33 -0.33
73 AT1G63480 AT hook motif DNA-binding family protein -0.7 0.32 -0.33
74 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 -0.7 0.32 -0.32
75 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 -0.69 0.33 -0.34
76 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 -0.68 0.3 -0.31
77 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.68 0.32 -0.32
78 AT5G17960 Cysteine/Histidine-rich C1 domain family protein -0.68 0.3 -0.33
79 AT3G13820 F-box and associated interaction domains-containing protein -0.67 0.3 -0.34
80 AT2G39870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits
to 71 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.31
81 AT5G53190 Nodulin MtN3 family protein AtSWEET3, SWEET3 -0.66 0.3 -0.34
82 AT1G79760 downstream target of AGL15-4 downstream target of AGL15-4 -0.66 0.31 -0.32
83 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 -0.66 0.33 -0.32
84 AT5G47100 calcineurin B-like protein 9 ATCBL9, calcineurin B-like protein
9		 -0.66 0.32 -0.32
85 AT2G41550 Rho termination factor -0.66 0.3 -0.31
86 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.66 0.34 -0.3
87 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 -0.65 0.33 -0.32
88 AT2G44980 SNF2 domain-containing protein / helicase domain-containing
protein		 ALTERED SEED GERMINATION 3 -0.65 0.31 -0.31
89 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein -0.64 0.32 -0.3
90 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 -0.64 0.3 -0.33
91 AT1G68120 basic pentacysteine 3 ATBPC3, basic pentacysteine 3 -0.64 0.3 -0.35
92 AT1G80870 Protein kinase superfamily protein -0.64 0.32 -0.31
93 AT4G16570 protein arginine methyltransferase 7 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 7,
protein arginine methyltransferase
7		 -0.64 0.33 -0.33
94 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.31
95 AT4G27980 Domain of unknown function (DUF3444) -0.63 0.28 -0.31
96 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.3 -0.33
97 AT1G17460 TRF-like 3 TRF-like 3 -0.63 0.31 -0.32
98 AT5G28700 transposable element gene -0.63 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.82 0.46 -0.45 C0120
100 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.79 0.44 -0.42 C0220