AT5G40250 : -
Query Information
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AGICode AT5G40250
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40250 RING/U-box superfamily protein 1 0.31 -0.33
2 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 0.72 0.31 -0.31
3 AT1G60220 UB-like protease 1D OVERLY TOLERANT TO SALT 1, UB-like
protease 1D		 -0.7 0.32 -0.31
4 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.68 0.32 -0.32
5 AT2G47830 Cation efflux family protein -0.66 0.32 -0.31
6 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 -0.66 0.32 -0.32
7 AT1G26090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.31 -0.31
8 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 0.65 0.31 -0.31
9 AT5G43310 COP1-interacting protein-related -0.65 0.29 -0.32
10 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.32 -0.32
11 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 0.64 0.32 -0.32
12 AT5G36210 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.32
13 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.29 -0.3
14 AT1G24490 OxaA/YidC-like membrane insertion protein ALBINA 4, ARABIDOPSIS THALIANA
ENVELOPE MEMBRANE INTEGRASE		 -0.63 0.31 -0.33
15 AT1G28130 Auxin-responsive GH3 family protein GH3.17 0.63 0.32 -0.32
16 AT5G16810 Protein kinase superfamily protein -0.63 0.32 -0.3
17 AT5G51470 Auxin-responsive GH3 family protein 0.63 0.32 -0.32
18 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 -0.62 0.32 -0.31
19 AT4G32640 Sec23/Sec24 protein transport family protein -0.61 0.3 -0.33
20 AT2G40280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.29 -0.3
21 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 -0.61 0.31 -0.3
22 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.61 0.32 -0.32
23 AT4G31020 alpha/beta-Hydrolases superfamily protein 0.61 0.31 -0.3
24 AT5G16210 HEAT repeat-containing protein -0.6 0.3 -0.33
25 AT2G47310 flowering time control protein-related / FCA gamma-related -0.6 0.34 -0.29
26 AT5G61605 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: petal, leaf whorl, sepal, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: Maternally expressed gene (MEG) family protein
(TAIR:AT2G16505.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.6 0.3 -0.33
27 AT5G08750 RING/FYVE/PHD zinc finger superfamily protein -0.6 0.32 -0.32
28 AT1G80730 zinc-finger protein 1 ARABIDOPSIS THALIANA ZINC-FINGER
PROTEIN 1, zinc-finger protein 1		 0.6 0.3 -0.34
29 AT1G74840 Homeodomain-like superfamily protein 0.6 0.33 -0.34
30 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 -0.6 0.32 -0.32
31 AT1G70570 anthranilate phosphoribosyltransferase, putative -0.59 0.31 -0.31
32 AT5G39790 5'-AMP-activated protein kinase-related -0.59 0.3 -0.32
33 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.58 0.31 -0.32
34 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.31 -0.3
35 AT2G32040 Major facilitator superfamily protein -0.57 0.31 -0.3
36 AT2G29080 FTSH protease 3 FTSH protease 3 -0.57 0.31 -0.33
37 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.33 -0.3
38 AT2G34840 Coatomer epsilon subunit -0.57 0.31 -0.31
39 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.57 0.32 -0.3
40 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 -0.57 0.31 -0.3
41 AT4G25580 CAP160 protein -0.57 0.31 -0.32
42 AT5G08170 porphyromonas-type peptidyl-arginine deiminase family
protein		 AGMATINE IMINOHYDROLASE, EMBRYO
DEFECTIVE 1873		 0.57 0.31 -0.32
43 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 -0.57 0.32 -0.33
44 AT1G71820 SEC6 SEC6 -0.57 0.32 -0.3
45 AT3G13360 WPP domain interacting protein 3 WPP domain interacting protein 3 0.57 0.33 -0.32
46 AT1G49840 Protein of unknown function (DUF620) 0.57 0.32 -0.34
47 AT4G19500 nucleoside-triphosphatases;transmembrane
receptors;nucleotide binding;ATP binding		 -0.56 0.31 -0.3
48 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 -0.56 0.3 -0.29
49 AT1G78700 BES1/BZR1 homolog 4 BES1/BZR1 homolog 4 0.56 0.32 -0.32
50 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein -0.56 0.29 -0.31
51 AT1G12470 zinc ion binding -0.55 0.29 -0.3
52 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 -0.55 0.33 -0.32
53 AT1G28090 Polynucleotide adenylyltransferase family protein -0.55 0.29 -0.32
54 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1		 0.55 0.32 -0.3
55 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 -0.55 0.31 -0.32
56 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein -0.55 0.33 -0.3
57 AT1G71410 ARM repeat superfamily protein -0.55 0.31 -0.32
58 AT1G01280 cytochrome P450, family 703, subfamily A, polypeptide 2 CYP703, cytochrome P450, family
703, subfamily A, polypeptide 2		 -0.55 0.33 -0.32
59 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 0.55 0.34 -0.31
60 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 -0.55 0.31 -0.31
61 AT4G03140 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.33 -0.31
62 AT3G18810 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 6, proline-rich
extensin-like receptor kinase 6		 -0.54 0.31 -0.31
63 AT4G38940 Galactose oxidase/kelch repeat superfamily protein 0.54 0.3 -0.33
64 AT5G13050 5-formyltetrahydrofolate cycloligase 5-formyltetrahydrofolate
cycloligase		 -0.54 0.33 -0.31
65 AT5G67430 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.54 0.33 -0.31
66 AT2G23240 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4b		 -0.54 0.32 -0.32
67 AT3G43020 transposable element gene 0.54 0.32 -0.32
68 AT3G26310 cytochrome P450, family 71, subfamily B, polypeptide 35 cytochrome P450, family 71,
subfamily B, polypeptide 35		 -0.54 0.29 -0.31
69 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF		 -0.53 0.33 -0.32
70 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 -0.53 0.31 -0.3
71 AT1G04310 ethylene response sensor 2 ethylene response sensor 2 -0.53 0.33 -0.33
72 AT3G59870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast
hits to 292 proteins in 84 species: Archae - 0; Bacteria -
122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0;
Other Eukaryotes - 124 (source: NCBI BLink).		 -0.53 0.31 -0.33
73 AT2G17030 F-box family protein with a domain of unknown function
(DUF295)		 -0.53 0.32 -0.34
74 AT2G14570 transposable element gene -0.53 0.32 -0.32
75 AT5G03590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.53 0.32 -0.31
76 AT5G51300 splicing factor-related -0.53 0.32 -0.3
77 AT5G06580 FAD-linked oxidases family protein -0.53 0.3 -0.32
78 AT2G30300 Major facilitator superfamily protein -0.52 0.31 -0.29
79 AT4G14070 acyl-activating enzyme 15 acyl-activating enzyme 15 -0.52 0.33 -0.31
80 AT5G20760 transposable element gene 0.52 0.31 -0.29
81 AT2G38950 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.52 0.33 -0.32
82 AT1G55030 RNI-like superfamily protein 0.52 0.31 -0.32
83 AT2G28700 AGAMOUS-like 46 AGAMOUS-like 46 0.52 0.31 -0.33
84 AT5G44930 Exostosin family protein ARABINAN DEFICIENT 2 -0.52 0.31 -0.31
85 AT3G06260 galacturonosyltransferase-like 4 galacturonosyltransferase-like 4,
galactinol synthase 9		 -0.52 0.3 -0.32
86 AT2G47300 ribonuclease Ps 0.52 0.29 -0.31
87 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.51 0.31 -0.32
88 AT3G25420 serine carboxypeptidase-like 21 serine carboxypeptidase-like 21 0.51 0.32 -0.31
89 AT5G10220 annexin 6 annexin 6, ANNEXIN ARABIDOPSIS
THALIANA 6		 0.51 0.32 -0.31
90 AT1G27240 Paired amphipathic helix (PAH2) superfamily protein -0.51 0.33 -0.32
91 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.5 0.32 -0.31
92 AT5G47000 Peroxidase superfamily protein 0.5 0.32 -0.32
93 AT5G06560 Protein of unknown function, DUF593 0.49 0.31 -0.3
94 AT5G24100 Leucine-rich repeat protein kinase family protein 0.49 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.67 0.46 -0.43 C0186