AGICode | AT5G23640 |
Description | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G23640 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.33 | -0.34 | |||
2 | AT1G62390 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
CLUMPED CHLOROPLASTS 1, Phox2 | -0.7 | 0.31 | -0.33 | ||
3 | AT5G39980 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.67 | 0.32 | -0.3 | |||
4 | AT2G24120 | DNA/RNA polymerases superfamily protein | PIGMENT DEFECTIVE 319, SCABRA 3 | -0.66 | 0.31 | -0.32 | ||
5 | AT5G63140 | purple acid phosphatase 29 | purple acid phosphatase 29, PAP29, purple acid phosphatase 29 |
-0.66 | 0.33 | -0.27 | ||
6 | AT2G40050 | Cysteine/Histidine-rich C1 domain family protein | 0.64 | 0.33 | -0.3 | |||
7 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | -0.62 | 0.31 | -0.33 | |||
8 | AT1G59990 | DEA(D/H)-box RNA helicase family protein | EMBRYO DEFECTIVE 3108, RNA helicase 22 |
-0.61 | 0.33 | -0.32 | ||
9 | AT1G63680 | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases |
ALBINO OR PALE-GREEN 13, ATMURE, MURE, PIGMENT DEFECTIVE EMBRYO 316 |
-0.61 | 0.33 | -0.32 | ||
10 | AT5G08400 | Protein of unknown function (DUF3531) | -0.6 | 0.32 | -0.33 | |||
11 | AT1G47765 | F-box and associated interaction domains-containing protein | 0.59 | 0.32 | -0.3 | |||
12 | AT5G59600 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.31 | -0.32 | |||
13 | AT4G15890 | binding | -0.58 | 0.3 | -0.31 | |||
14 | AT4G31210 | DNA topoisomerase, type IA, core | -0.58 | 0.31 | -0.3 | |||
15 | AT2G38720 | microtubule-associated protein 65-5 | microtubule-associated protein 65-5 |
-0.58 | 0.33 | -0.32 | ||
16 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
-0.57 | 0.31 | -0.29 | ||
17 | AT2G19510 | LOB domain-containing protein 8 | LOB domain-containing protein 8 | 0.57 | 0.3 | -0.33 | ||
18 | AT1G20230 | Pentatricopeptide repeat (PPR) superfamily protein | -0.57 | 0.32 | -0.31 | |||
19 | AT3G21430 | DNA binding | ALWAYS EARLY 3, ARABIDOPSIS THALIANA ALWAYS EARLY 3 |
-0.57 | 0.3 | -0.32 | ||
20 | AT1G65640 | DegP protease 4 | DegP protease 4 | 0.56 | 0.34 | -0.33 | ||
21 | AT3G52170 | DNA binding | -0.56 | 0.29 | -0.32 | |||
22 | AT4G11700 | Protein of unknown function (DUF626) | 0.56 | 0.32 | -0.32 | |||
23 | AT5G46520 | Disease resistance protein (TIR-NBS-LRR class) family | 0.56 | 0.31 | -0.31 | |||
24 | AT5G42320 | Zn-dependent exopeptidases superfamily protein | -0.55 | 0.35 | -0.29 | |||
25 | AT4G16460 | unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 4; Plants - 16; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.55 | 0.3 | -0.32 | |||
26 | AT2G18380 | GATA transcription factor 20 | GATA transcription factor 20, hanaba taranu like 1 |
-0.55 | 0.34 | -0.31 | ||
27 | AT1G53510 | mitogen-activated protein kinase 18 | ARABIDOPSIS THALIANA MAP KINASE 18, mitogen-activated protein kinase 18 |
-0.54 | 0.32 | -0.31 | ||
28 | AT5G55670 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.54 | 0.33 | -0.31 | |||
29 | AT4G21140 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.54 | 0.32 | -0.32 | |||
30 | AT1G53980 | Ubiquitin-like superfamily protein | 0.51 | 0.31 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
31 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | 0.76 | 0.48 | -0.48 | ||
32 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.74 | 0.4 | -0.46 | ||
33 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 0.69 | 0.44 | -0.42 | ||
34 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.68 | 0.47 | -0.42 | ||
35 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
0.66 | 0.44 | -0.45 | ||
36 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.65 | 0.4 | -0.44 | ||
37 | C0004 | β-Alanine | - | β-Alanine | uracil degradation II (reductive), pantothenate biosynthesis, beta-alanine biosynthesis II, beta-alanine biosynthesis I |
0.53 | 0.31 | -0.31 |