AT5G07960 : -
Query Information
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AGICode AT5G07960
Description unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 1 0.3 -0.33
2 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.84 0.32 -0.33
3 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.83 0.31 -0.31
4 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.8 0.3 -0.32
5 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.79 0.31 -0.33
6 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 0.78 0.34 -0.32
7 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.78 0.3 -0.32
8 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.78 0.32 -0.3
9 AT4G36420 Ribosomal protein L12 family protein 0.77 0.3 -0.34
10 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.76 0.3 -0.31
11 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.32
12 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.31
13 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 0.75 0.32 -0.31
14 AT1G45160 Protein kinase superfamily protein -0.75 0.29 -0.33
15 AT4G29390 Ribosomal protein S30 family protein 0.75 0.32 -0.31
16 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.75 0.32 -0.31
17 AT4G14760 kinase interacting (KIP1-like) family protein -0.75 0.3 -0.32
18 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.74 0.31 -0.32
19 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.74 0.32 -0.31
20 AT1G02360 Chitinase family protein 0.74 0.32 -0.31
21 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.74 0.32 -0.3
22 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.73 0.31 -0.33
23 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 0.73 0.32 -0.31
24 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.72 0.31 -0.31
25 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.72 0.31 -0.33
26 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.72 0.31 -0.3
27 AT5G02740 Ribosomal protein S24e family protein 0.72 0.32 -0.31
28 AT5G54750 Transport protein particle (TRAPP) component 0.72 0.32 -0.31
29 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.71 0.32 -0.3
30 AT4G27270 Quinone reductase family protein 0.71 0.34 -0.32
31 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.71 0.34 -0.32
32 AT5G18110 novel cap-binding protein novel cap-binding protein 0.71 0.3 -0.32
33 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.31 -0.34
34 AT1G77350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function KRTCAP2
(InterPro:IPR018614); Has 141 Blast hits to 141 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi -
0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 0.71 0.33 -0.3
35 AT5G19760 Mitochondrial substrate carrier family protein 0.71 0.32 -0.32
36 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.71 0.32 -0.32
37 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.71 0.33 -0.32
38 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 0.71 0.32 -0.32
39 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 0.7 0.32 -0.33
40 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.7 0.32 -0.32
41 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.7 0.3 -0.31
42 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.7 0.34 -0.32
43 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.7 0.33 -0.32
44 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 0.7 0.33 -0.31
45 AT1G29990 prefoldin 6 prefoldin 6 0.69 0.33 -0.32
46 AT5G27820 Ribosomal L18p/L5e family protein 0.69 0.32 -0.3
47 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.69 0.31 -0.33
48 AT3G04780 Protein of unknown function (DUF1000) 0.69 0.3 -0.3
49 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.69 0.31 -0.32
50 AT3G47980 Integral membrane HPP family protein 0.69 0.29 -0.34
51 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.68 0.34 -0.29
52 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 0.68 0.3 -0.31
53 AT2G17110 Protein of unknown function (DUF630 and DUF632) -0.68 0.33 -0.32
54 AT2G23310 Rer1 family protein ATRER1C1 0.68 0.32 -0.3
55 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.68 0.32 -0.31
56 AT2G38905 Low temperature and salt responsive protein family -0.68 0.32 -0.34
57 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.68 0.3 -0.3
58 AT1G48090 calcium-dependent lipid-binding family protein -0.68 0.31 -0.31
59 AT3G19960 myosin 1 myosin 1 -0.68 0.3 -0.31
60 AT5G59910 Histone superfamily protein HTB4 0.68 0.34 -0.3
61 AT2G45620 Nucleotidyltransferase family protein -0.68 0.31 -0.31
62 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.68 0.32 -0.31
63 AT2G17710 unknown protein; Has 39 Blast hits to 39 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.33 -0.32
64 AT1G03900 non-intrinsic ABC protein 4 ATP-binding cassette I18,
non-intrinsic ABC protein 4,
non-intrinsic ABC protein 4		 0.67 0.34 -0.3
65 AT2G43880 Pectin lyase-like superfamily protein 0.67 0.31 -0.31
66 AT2G01970 Endomembrane protein 70 protein family 0.67 0.31 -0.31
67 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.67 0.3 -0.3
68 AT3G08630 Protein of unknown function (DUF3411) 0.67 0.3 -0.32
69 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 0.67 0.31 -0.32
70 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 -0.66 0.32 -0.32
71 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.66 0.31 -0.31
72 AT3G42790 alfin-like 3 alfin-like 3 0.66 0.33 -0.31
73 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 0.66 0.36 -0.3
74 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.31 -0.3
75 AT5G49010 DNA replication protein-related EMBRYO DEFECTIVE 2812, SYNTHETIC
LETHALITY WITH DPB11-1 5		 0.66 0.3 -0.32
76 AT4G22720 Actin-like ATPase superfamily protein 0.66 0.33 -0.33
77 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.66 0.34 -0.33
78 AT3G05150 Major facilitator superfamily protein 0.66 0.3 -0.3
79 AT2G07650 transposable element gene -0.66 0.3 -0.3
80 AT5G09770 Ribosomal protein L17 family protein 0.66 0.32 -0.31
81 AT3G42460 transposable element gene -0.65 0.33 -0.33
82 ATCG00750 ribosomal protein S11 ribosomal protein S11 -0.65 0.34 -0.31
83 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.31 -0.31
84 AT3G08020 PHD finger family protein -0.65 0.31 -0.33
85 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 -0.65 0.31 -0.29
86 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.65 0.32 -0.32
87 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.64 0.31 -0.32
88 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.64 0.32 -0.31
89 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.34 -0.31
90 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein -0.64 0.31 -0.32
91 AT5G07890 myosin heavy chain-related -0.64 0.32 -0.32
92 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.64 0.31 -0.33
93 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.64 0.31 -0.33
94 AT1G72650 TRF-like 6 TRF-like 6 -0.64 0.34 -0.33
95 AT3G17290 transposable element gene -0.63 0.31 -0.3
96 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 -0.63 0.31 -0.31
97 AT3G03620 MATE efflux family protein -0.63 0.31 -0.32
98 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.63 0.33 -0.32
99 AT2G15810 transposable element gene -0.63 0.31 -0.29
100 AT1G09550 Pectinacetylesterase family protein -0.63 0.33 -0.31
101 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.63 0.32 -0.33
102 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.63 0.32 -0.3
103 AT2G29770 Galactose oxidase/kelch repeat superfamily protein -0.63 0.32 -0.31
104 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.63 0.33 -0.33
105 AT1G02020 nitroreductase family protein -0.62 0.31 -0.31
106 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.62 0.34 -0.32
107 AT3G42700 transposable element gene -0.62 0.3 -0.32
108 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.31 -0.3
109 AT3G24790 Protein kinase superfamily protein -0.62 0.3 -0.32
110 AT2G46180 golgin candidate 4 golgin candidate 4 -0.62 0.3 -0.31
111 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.61 0.29 -0.33
112 AT5G24740 Protein of unknown function (DUF1162) -0.61 0.33 -0.32
113 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 -0.61 0.31 -0.33
114 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.61 0.32 -0.31
115 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.61 0.31 -0.31
116 AT3G43100 transposable element gene -0.6 0.31 -0.33
117 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.6 0.33 -0.31
118 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.6 0.32 -0.3
119 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 -0.6 0.31 -0.31
120 AT1G10000 Ribonuclease H-like superfamily protein -0.6 0.31 -0.31
121 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 -0.6 0.32 -0.3
122 AT2G37880 Protein of unknown function, DUF617 -0.6 0.32 -0.32
123 AT4G11950 Protein of unknown function (DUF1191) -0.6 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.78 0.45 -0.45 C0266
125 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.76 0.45 -0.44 C0056
126 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.76 0.46 -0.46 C0057
127 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.73 0.45 -0.48 C0193
128 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.69 0.46 -0.43 C0099
129 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.69 0.43 -0.45 C0032
130 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.68 0.45 -0.44 C0267
131 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.67 0.44 -0.44 C0234